RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ZMYND10O75800 440 aa9.63□□□□□ -0.87
DEPDC4-205ENST00000548313 GGCXP38435 758 aa9.63□□□□□ -0.87
DEPDC4-205ENST00000548313 NUDT18Q6ZVK8 323 aa9.63□□□□□ -0.87
DEPDC4-205ENST00000548313 C3orf80F5H4A9 247 aa9.62□□□□□ -0.87
DEPDC4-205ENST00000548313 GPR37O15354 613 aa9.62□□□□□ -0.87
DEPDC4-205ENST00000548313 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
DEPDC4-205ENST00000548313 NPDC1Q9NQX5 325 aaPredicted RBP9.62□□□□□ -0.87
DEPDC4-205ENST00000548313 GNPATO15228 680 aa9.61□□□□□ -0.87
DEPDC4-205ENST00000548313 APLP1P51693 650 aa9.61□□□□□ -0.87
DEPDC4-205ENST00000548313 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
DEPDC4-205ENST00000548313 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
DEPDC4-205ENST00000548313 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
DEPDC4-205ENST00000548313 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
DEPDC4-205ENST00000548313 SLC4A3P48751 1232 aa9.59□□□□□ -0.87
DEPDC4-205ENST00000548313 SLF2Q8IX21 1173 aa9.59□□□□□ -0.87
DEPDC4-205ENST00000548313 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
DEPDC4-205ENST00000548313 ZNF787Q6DD87 383 aa9.56□□□□□ -0.88
DEPDC4-205ENST00000548313 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
DEPDC4-205ENST00000548313 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
DEPDC4-205ENST00000548313 MINK1Q8N4C8 1332 aaPredicted RBP9.56□□□□□ -0.88
DEPDC4-205ENST00000548313 COPS2P61201 443 aa9.55□□□□□ -0.88
DEPDC4-205ENST00000548313 KRI1Q8N9T8 703 aaKnown RBP9.55□□□□□ -0.88
DEPDC4-205ENST00000548313 PRR14Q9BWN1 585 aa9.55□□□□□ -0.88
DEPDC4-205ENST00000548313 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
DEPDC4-205ENST00000548313 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-205ENST00000548313 IRF6O14896 467 aa9.52□□□□□ -0.89
DEPDC4-205ENST00000548313 ZPR1O75312 459 aa9.52□□□□□ -0.89
DEPDC4-205ENST00000548313 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
DEPDC4-205ENST00000548313 FECHP22830 423 aa9.51□□□□□ -0.89
DEPDC4-205ENST00000548313 AK7Q96M32 723 aa9.51□□□□□ -0.89
DEPDC4-205ENST00000548313 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
DEPDC4-205ENST00000548313 OATP04181 439 aa9.49□□□□□ -0.89
DEPDC4-205ENST00000548313 EYA1Q99502 592 aa9.48□□□□□ -0.89
DEPDC4-205ENST00000548313 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
DEPDC4-205ENST00000548313 SLC19A1P41440 591 aa9.47□□□□□ -0.89
DEPDC4-205ENST00000548313 ADGRG1Q9Y653 693 aa9.46□□□□□ -0.9
DEPDC4-205ENST00000548313 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
DEPDC4-205ENST00000548313 RBM46Q8TBY0 533 aaKnown RBP9.45□□□□□ -0.9
DEPDC4-205ENST00000548313 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
DEPDC4-205ENST00000548313 TRIM66O15016 1216 aa9.43□□□□□ -0.9
DEPDC4-205ENST00000548313 DGAT1O75907 488 aa9.43□□□□□ -0.9
DEPDC4-205ENST00000548313 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
DEPDC4-205ENST00000548313 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
DEPDC4-205ENST00000548313 ZNF775Q96BV0 537 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-205ENST00000548313 DNAJB2P25686 324 aa9.42□□□□□ -0.9
DEPDC4-205ENST00000548313 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
DEPDC4-205ENST00000548313 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
DEPDC4-205ENST00000548313 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
DEPDC4-205ENST00000548313 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
DEPDC4-205ENST00000548313 SPRYD7Q5W111 196 aa9.41□□□□□ -0.9
DEPDC4-205ENST00000548313 ZNF598Q86UK7 904 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-205ENST00000548313 PRR20EP86478 221 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 PRR20CP86479 221 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 PRR20DP86480 221 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 PRR20BP86481 221 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 PRR20AP86496 221 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 AMHR2Q16671 573 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 KMT5BQ4FZB7 885 aa9.4□□□□□ -0.9
DEPDC4-205ENST00000548313 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
DEPDC4-205ENST00000548313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-205ENST00000548313 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-205ENST00000548313 MYT1Q01538 1121 aa9.38□□□□□ -0.91
DEPDC4-205ENST00000548313 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
DEPDC4-205ENST00000548313 PDE4DQ08499 809 aa9.37□□□□□ -0.91
DEPDC4-205ENST00000548313 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
DEPDC4-205ENST00000548313 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
DEPDC4-205ENST00000548313 PHOX2BQ99453 314 aa9.36□□□□□ -0.91
DEPDC4-205ENST00000548313 TLL1O43897 1013 aa9.35□□□□□ -0.91
DEPDC4-205ENST00000548313 CLCN1P35523 988 aa9.35□□□□□ -0.91
DEPDC4-205ENST00000548313 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
DEPDC4-205ENST00000548313 NR1I2O75469 434 aa9.34□□□□□ -0.91
DEPDC4-205ENST00000548313 S1PR4O95977 384 aa9.34□□□□□ -0.91
DEPDC4-205ENST00000548313 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
DEPDC4-205ENST00000548313 ADH1BP00325 375 aa9.33□□□□□ -0.92
DEPDC4-205ENST00000548313 CFHP08603 1231 aa9.33□□□□□ -0.92
DEPDC4-205ENST00000548313 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
DEPDC4-205ENST00000548313 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
DEPDC4-205ENST00000548313 GPCPD1Q9NPB8 672 aa9.32□□□□□ -0.92
DEPDC4-205ENST00000548313 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
DEPDC4-205ENST00000548313 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
DEPDC4-205ENST00000548313 GDF9O60383 454 aa9.31□□□□□ -0.92
DEPDC4-205ENST00000548313 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-205ENST00000548313 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-205ENST00000548313 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
DEPDC4-205ENST00000548313 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
DEPDC4-205ENST00000548313 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
DEPDC4-205ENST00000548313 TNFRSF10AO00220 468 aa9.29□□□□□ -0.92
DEPDC4-205ENST00000548313 RSPH4AQ5TD94 716 aa9.29□□□□□ -0.92
DEPDC4-205ENST00000548313 POTECB2RU33 542 aa9.28□□□□□ -0.92
DEPDC4-205ENST00000548313 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
DEPDC4-205ENST00000548313 SLC10A3P09131 477 aa9.27□□□□□ -0.93
DEPDC4-205ENST00000548313 GIGYF2Q6Y7W6 1299 aaKnown RBP9.27□□□□□ -0.93
DEPDC4-205ENST00000548313 KDM4CQ9H3R0 1056 aa9.27□□□□□ -0.93
DEPDC4-205ENST00000548313 SCUBE3Q8IX30 993 aa9.26□□□□□ -0.93
DEPDC4-205ENST00000548313 NLRP7Q8WX94 980 aa9.26□□□□□ -0.93
DEPDC4-205ENST00000548313 REPIN1Q9BWE0 567 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-205ENST00000548313 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-205ENST00000548313 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-205ENST00000548313 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-205ENST00000548313 AAASQ9NRG9 546 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms