RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 NUP155O75694 1391 aa10.41□□□□□ -0.74
TMEM116-206ENST00000548283 NEXMIFQ5QGS0 1516 aa10.4□□□□□ -0.74
TMEM116-206ENST00000548283 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
TMEM116-206ENST00000548283 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
TMEM116-206ENST00000548283 RIMS1Q86UR5 1692 aaKnown RBP10.4□□□□□ -0.74
TMEM116-206ENST00000548283 NPATQ14207 1427 aa10.39□□□□□ -0.75
TMEM116-206ENST00000548283 CHIC2Q9UKJ5 165 aa10.39□□□□□ -0.75
TMEM116-206ENST00000548283 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
TMEM116-206ENST00000548283 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
TMEM116-206ENST00000548283 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
TMEM116-206ENST00000548283 ADGRB1O14514 1584 aa10.37□□□□□ -0.75
TMEM116-206ENST00000548283 MYO5BQ9ULV0 1848 aa10.37□□□□□ -0.75
TMEM116-206ENST00000548283 AFAP1Q8N556 730 aa10.37□□□□□ -0.75
TMEM116-206ENST00000548283 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-206ENST00000548283 ITGAEP38570 1179 aa10.36□□□□□ -0.75
TMEM116-206ENST00000548283 POLR3GLQ9BT43 218 aa10.36□□□□□ -0.75
TMEM116-206ENST00000548283 MYOM1P52179 1685 aa10.36□□□□□ -0.75
TMEM116-206ENST00000548283 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
TMEM116-206ENST00000548283 SIN3AQ96ST3 1273 aa10.35□□□□□ -0.75
TMEM116-206ENST00000548283 UBR1Q8IWV7 1749 aa10.35□□□□□ -0.75
TMEM116-206ENST00000548283 NRXN3Q9Y4C0 1643 aa10.35□□□□□ -0.75
TMEM116-206ENST00000548283 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-206ENST00000548283 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
TMEM116-206ENST00000548283 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-206ENST00000548283 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 C3P01024 1663 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 TONSLQ96HA7 1378 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 MIER1Q8N108 512 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
TMEM116-206ENST00000548283 PKD2Q13563 968 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
TMEM116-206ENST00000548283 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
TMEM116-206ENST00000548283 KANK1Q14678 1352 aa10.32□□□□□ -0.76
TMEM116-206ENST00000548283 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
TMEM116-206ENST00000548283 IGSF3O75054 1194 aa10.32□□□□□ -0.76
TMEM116-206ENST00000548283 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
TMEM116-206ENST00000548283 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-206ENST00000548283 CYB5RLQ6IPT4 315 aa10.31□□□□□ -0.76
TMEM116-206ENST00000548283 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
TMEM116-206ENST00000548283 USP54Q70EL1 1684 aa10.29□□□□□ -0.76
TMEM116-206ENST00000548283 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-206ENST00000548283 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
TMEM116-206ENST00000548283 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
TMEM116-206ENST00000548283 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
TMEM116-206ENST00000548283 SBNO2Q9Y2G9 1366 aa10.27□□□□□ -0.77
TMEM116-206ENST00000548283 SLIT1O75093 1534 aa10.27□□□□□ -0.77
TMEM116-206ENST00000548283 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
TMEM116-206ENST00000548283 NBR1Q14596 966 aa10.26□□□□□ -0.77
TMEM116-206ENST00000548283 FAM69CQ0P6D2 419 aa10.25□□□□□ -0.77
TMEM116-206ENST00000548283 QRICH2Q9H0J4 1663 aa10.25□□□□□ -0.77
TMEM116-206ENST00000548283 DIP2AQ14689 1571 aa10.25□□□□□ -0.77
TMEM116-206ENST00000548283 ARHGAP23Q9P227 1491 aa10.25□□□□□ -0.77
TMEM116-206ENST00000548283 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-206ENST00000548283 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
TMEM116-206ENST00000548283 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
TMEM116-206ENST00000548283 PDE4CQ08493 712 aa10.24□□□□□ -0.77
TMEM116-206ENST00000548283 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-206ENST00000548283 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
TMEM116-206ENST00000548283 MED14O60244 1454 aa10.23□□□□□ -0.77
TMEM116-206ENST00000548283 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
TMEM116-206ENST00000548283 A2ML1A8K2U0 1454 aa10.23□□□□□ -0.77
TMEM116-206ENST00000548283 SCAF11Q99590 1463 aaKnown RBP10.22□□□□□ -0.77
TMEM116-206ENST00000548283 CPS1P31327 1500 aa10.22□□□□□ -0.77
TMEM116-206ENST00000548283 NLRP1Q9C000 1473 aa10.22□□□□□ -0.77
TMEM116-206ENST00000548283 FOXD1Q16676 465 aa10.22□□□□□ -0.77
TMEM116-206ENST00000548283 RAPGEF3O95398 923 aa10.21□□□□□ -0.77
TMEM116-206ENST00000548283 ANKRD26Q9UPS8 1709 aa10.2□□□□□ -0.78
TMEM116-206ENST00000548283 TOPAZ1Q8N9V7 1692 aa10.2□□□□□ -0.78
TMEM116-206ENST00000548283 ALKQ9UM73 1620 aa10.19□□□□□ -0.78
TMEM116-206ENST00000548283 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
TMEM116-206ENST00000548283 TECPR2O15040 1411 aa10.19□□□□□ -0.78
TMEM116-206ENST00000548283 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-206ENST00000548283 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
TMEM116-206ENST00000548283 PTPRMP28827 1452 aa10.19□□□□□ -0.78
TMEM116-206ENST00000548283 IRX6P78412 446 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-206ENST00000548283 NWD1Q149M9 1564 aa10.18□□□□□ -0.78
TMEM116-206ENST00000548283 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
TMEM116-206ENST00000548283 USP47Q96K76 1375 aa10.18□□□□□ -0.78
TMEM116-206ENST00000548283 KIF3BO15066 747 aa10.18□□□□□ -0.78
TMEM116-206ENST00000548283 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
TMEM116-206ENST00000548283 SLC52A1Q9NWF4 448 aa10.16□□□□□ -0.78
TMEM116-206ENST00000548283 LMTK3Q96Q04 1460 aa10.16□□□□□ -0.78
TMEM116-206ENST00000548283 WASHC2AQ641Q2 1341 aa10.16□□□□□ -0.78
TMEM116-206ENST00000548283 INSRP06213 1382 aa10.16□□□□□ -0.78
TMEM116-206ENST00000548283 KTN1Q86UP2 1357 aaKnown RBP10.16□□□□□ -0.78
TMEM116-206ENST00000548283 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
TMEM116-206ENST00000548283 ZNF428Q96B54 188 aa10.15□□□□□ -0.78
TMEM116-206ENST00000548283 TESK2Q96S53 571 aa10.14□□□□□ -0.79
TMEM116-206ENST00000548283 HSPA5P11021 654 aaKnown RBP10.14□□□□□ -0.79
TMEM116-206ENST00000548283 AKAP12Q02952 1782 aa10.13□□□□□ -0.79
TMEM116-206ENST00000548283 NRKQ7Z2Y5 1582 aa10.13□□□□□ -0.79
TMEM116-206ENST00000548283 NPC1L1Q9UHC9 1359 aa10.13□□□□□ -0.79
TMEM116-206ENST00000548283 EIF4G2P78344 907 aaKnown RBP eCLIP10.13□□□□□ -0.79
TMEM116-206ENST00000548283 YTHDC1Q96MU7 727 aaKnown RBP10.13□□□□□ -0.79
TMEM116-206ENST00000548283 ANP32EQ9BTT0 268 aa10.13□□□□□ -0.79
TMEM116-206ENST00000548283 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
TMEM116-206ENST00000548283 CEP170BQ9Y4F5 1589 aaPredicted RBP10.12□□□□□ -0.79
TMEM116-206ENST00000548283 C14orf93Q9H972 538 aaKnown RBP10.12□□□□□ -0.79
TMEM116-206ENST00000548283 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
TMEM116-206ENST00000548283 A0A0U1RQG5 324 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms