RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 KDM6BO15054 1643 aa9.3□□□□□ -0.92
PTPRR-207ENST00000548220 NAIPQ13075 1403 aa9.29□□□□□ -0.92
PTPRR-207ENST00000548220 SETD5Q9C0A6 1442 aa9.29□□□□□ -0.92
PTPRR-207ENST00000548220 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
PTPRR-207ENST00000548220 EIF2AK4Q9P2K8 1649 aaKnown RBP9.29□□□□□ -0.92
PTPRR-207ENST00000548220 COL17A1Q9UMD9 1497 aaPredicted RBP9.29□□□□□ -0.92
PTPRR-207ENST00000548220 DHX29Q7Z478 1369 aaKnown RBP9.29□□□□□ -0.92
PTPRR-207ENST00000548220 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
PTPRR-207ENST00000548220 ATP10AO60312 1499 aa9.28□□□□□ -0.92
PTPRR-207ENST00000548220 KIF15Q9NS87 1388 aa9.28□□□□□ -0.92
PTPRR-207ENST00000548220 ANKRD50Q9ULJ7 1429 aa9.28□□□□□ -0.92
PTPRR-207ENST00000548220 AGLP35573 1532 aa9.27□□□□□ -0.93
PTPRR-207ENST00000548220 FAM135AQ9P2D6 1515 aa9.27□□□□□ -0.93
PTPRR-207ENST00000548220 ARHGEF40Q8TER5 1519 aa9.26□□□□□ -0.93
PTPRR-207ENST00000548220 PLCG2P16885 1265 aa9.26□□□□□ -0.93
PTPRR-207ENST00000548220 PCGF6Q9BYE7 350 aa9.26□□□□□ -0.93
PTPRR-207ENST00000548220 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
PTPRR-207ENST00000548220 A2MP01023 1474 aa9.26□□□□□ -0.93
PTPRR-207ENST00000548220 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
PTPRR-207ENST00000548220 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
PTPRR-207ENST00000548220 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
PTPRR-207ENST00000548220 ABCA6Q8N139 1617 aa9.25□□□□□ -0.93
PTPRR-207ENST00000548220 ITGAEP38570 1179 aa9.24□□□□□ -0.93
PTPRR-207ENST00000548220 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
PTPRR-207ENST00000548220 DEPDC5O75140 1603 aa9.24□□□□□ -0.93
PTPRR-207ENST00000548220 RRP7BPQ9NSQ0 103 aa9.24□□□□□ -0.93
PTPRR-207ENST00000548220 RNF17Q9BXT8 1623 aaKnown RBP9.23□□□□□ -0.93
PTPRR-207ENST00000548220 CLSPNQ9HAW4 1339 aa9.23□□□□□ -0.93
PTPRR-207ENST00000548220 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
PTPRR-207ENST00000548220 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
PTPRR-207ENST00000548220 UNC13BO14795 1591 aa9.22□□□□□ -0.93
PTPRR-207ENST00000548220 PYGBP11216 843 aa9.21□□□□□ -0.94
PTPRR-207ENST00000548220 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
PTPRR-207ENST00000548220 PRDM15P57071 1507 aaPredicted RBP9.2□□□□□ -0.94
PTPRR-207ENST00000548220 YEATS2Q9ULM3 1422 aa9.2□□□□□ -0.94
PTPRR-207ENST00000548220 KANK1Q14678 1352 aa9.2□□□□□ -0.94
PTPRR-207ENST00000548220 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
PTPRR-207ENST00000548220 VWDEQ8N2E2 1590 aa9.2□□□□□ -0.94
PTPRR-207ENST00000548220 ZC3H13Q5T200 1668 aaKnown RBP9.19□□□□□ -0.94
PTPRR-207ENST00000548220 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-207ENST00000548220 IQGAP3Q86VI3 1631 aa9.19□□□□□ -0.94
PTPRR-207ENST00000548220 LMTK2Q8IWU2 1503 aa9.19□□□□□ -0.94
PTPRR-207ENST00000548220 KIF3BO15066 747 aa9.18□□□□□ -0.94
PTPRR-207ENST00000548220 OCEL1Q9H607 264 aa9.18□□□□□ -0.94
PTPRR-207ENST00000548220 GSE1Q14687 1217 aa9.17□□□□□ -0.94
PTPRR-207ENST00000548220 RPRD2Q5VT52 1461 aaKnown RBP9.17□□□□□ -0.94
PTPRR-207ENST00000548220 ARHGAP31Q2M1Z3 1444 aa9.17□□□□□ -0.94
PTPRR-207ENST00000548220 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
PTPRR-207ENST00000548220 NUP155O75694 1391 aa9.17□□□□□ -0.94
PTPRR-207ENST00000548220 KLHL34Q8N239 644 aa9.16□□□□□ -0.94
PTPRR-207ENST00000548220 MROH1Q8NDA8 1641 aa9.16□□□□□ -0.94
PTPRR-207ENST00000548220 TET3O43151 1660 aa9.15□□□□□ -0.94
PTPRR-207ENST00000548220 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-207ENST00000548220 MROH2AA6NES4 1674 aa9.15□□□□□ -0.95
PTPRR-207ENST00000548220 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
PTPRR-207ENST00000548220 ZNF467Q7Z7K2 595 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-207ENST00000548220 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
PTPRR-207ENST00000548220 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
PTPRR-207ENST00000548220 PZPP20742 1482 aa9.13□□□□□ -0.95
PTPRR-207ENST00000548220 SETD1BQ9UPS6 1966 aaKnown RBP9.13□□□□□ -0.95
PTPRR-207ENST00000548220 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
PTPRR-207ENST00000548220 TIMELESSQ9UNS1 1208 aa9.12□□□□□ -0.95
PTPRR-207ENST00000548220 WASHC2CQ9Y4E1 1318 aa9.12□□□□□ -0.95
PTPRR-207ENST00000548220 ABCC3O15438 1527 aa9.12□□□□□ -0.95
PTPRR-207ENST00000548220 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
PTPRR-207ENST00000548220 DHX57Q6P158 1386 aaKnown RBP9.11□□□□□ -0.95
PTPRR-207ENST00000548220 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
PTPRR-207ENST00000548220 SIGLEC1Q9BZZ2 1709 aa9.11□□□□□ -0.95
PTPRR-207ENST00000548220 SNPHO15079 494 aa9.11□□□□□ -0.95
PTPRR-207ENST00000548220 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
PTPRR-207ENST00000548220 GGT6Q6P531 493 aa9.11□□□□□ -0.95
PTPRR-207ENST00000548220 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
PTPRR-207ENST00000548220 PTPRTO14522 1441 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 NEURL4Q96JN8 1562 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 ST18O60284 1047 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
PTPRR-207ENST00000548220 CAMSAP1Q5T5Y3 1602 aa9.09□□□□□ -0.95
PTPRR-207ENST00000548220 E9PCH4 1651 aa9.09□□□□□ -0.95
PTPRR-207ENST00000548220 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
PTPRR-207ENST00000548220 CHRM1P11229 460 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-207ENST00000548220 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-207ENST00000548220 CEP152O94986 1710 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 MKRN3Q13064 507 aaKnown RBP9.08□□□□□ -0.96
PTPRR-207ENST00000548220 PKD2Q13563 968 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 MLECQ14165 292 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-207ENST00000548220 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 NPATQ14207 1427 aa9.08□□□□□ -0.96
PTPRR-207ENST00000548220 ZMYM3Q14202 1370 aa9.07□□□□□ -0.96
PTPRR-207ENST00000548220 KDM5AP29375 1690 aaKnown RBP9.07□□□□□ -0.96
PTPRR-207ENST00000548220 NOS1P29475 1434 aa9.07□□□□□ -0.96
PTPRR-207ENST00000548220 SPHKAPQ2M3C7 1700 aa9.07□□□□□ -0.96
PTPRR-207ENST00000548220 CLTCQ00610 1675 aaKnown RBP9.06□□□□□ -0.96
PTPRR-207ENST00000548220 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-207ENST00000548220 TRPM2O94759 1503 aa9.06□□□□□ -0.96
PTPRR-207ENST00000548220 SPATA31D1Q6ZQQ2 1576 aa9.05□□□□□ -0.96
PTPRR-207ENST00000548220 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms