RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 TSPY4P0CV99 314 aa14.86□□□□□ -0.03
CDK4-205ENST00000547853 TSPY10P0CW01 314 aa14.86□□□□□ -0.03
CDK4-205ENST00000547853 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
CDK4-205ENST00000547853 PROSER2Q86WR7 435 aaPredicted RBP14.83□□□□□ -0.04
CDK4-205ENST00000547853 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 SLC26A8Q96RN1 970 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 KIF15Q9NS87 1388 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 ZFYVE9O95405 1425 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 NOS1P29475 1434 aa14.83□□□□□ -0.04
CDK4-205ENST00000547853 RGS12O14924 1447 aa14.82□□□□□ -0.04
CDK4-205ENST00000547853 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
CDK4-205ENST00000547853 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
CDK4-205ENST00000547853 MYOM3Q5VTT5 1437 aa14.8□□□□□ -0.04
CDK4-205ENST00000547853 TMEM131LA2VDJ0 1609 aa14.8□□□□□ -0.04
CDK4-205ENST00000547853 NCOA3Q9Y6Q9 1424 aa14.78□□□□□ -0.04
CDK4-205ENST00000547853 EP400Q96L91 3159 aa14.78□□□□□ -0.04
CDK4-205ENST00000547853 PLEKHG1Q9ULL1 1385 aa14.77□□□□□ -0.04
CDK4-205ENST00000547853 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
CDK4-205ENST00000547853 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.05
CDK4-205ENST00000547853 ASXL1Q8IXJ9 1541 aa14.76□□□□□ -0.05
CDK4-205ENST00000547853 IDI1Q13907 227 aa14.76□□□□□ -0.05
CDK4-205ENST00000547853 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
CDK4-205ENST00000547853 ABCC5O15440 1437 aa14.75□□□□□ -0.05
CDK4-205ENST00000547853 XRN1Q8IZH2 1706 aaKnown RBP14.75□□□□□ -0.05
CDK4-205ENST00000547853 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
CDK4-205ENST00000547853 RXRBP28702 533 aa14.74□□□□□ -0.05
CDK4-205ENST00000547853 KANK1Q14678 1352 aa14.73□□□□□ -0.05
CDK4-205ENST00000547853 RPRD2Q5VT52 1461 aaKnown RBP14.73□□□□□ -0.05
CDK4-205ENST00000547853 ADAMTS13Q76LX8 1427 aa14.73□□□□□ -0.05
CDK4-205ENST00000547853 DAPK1P53355 1430 aa14.72□□□□□ -0.05
CDK4-205ENST00000547853 RIMS2Q9UQ26 1411 aa14.72□□□□□ -0.05
CDK4-205ENST00000547853 SETBP1Q9Y6X0 1596 aa14.72□□□□□ -0.05
CDK4-205ENST00000547853 AFF2P51816 1311 aa14.71□□□□□ -0.05
CDK4-205ENST00000547853 SETD5Q9C0A6 1442 aa14.71□□□□□ -0.05
CDK4-205ENST00000547853 UNC13BO14795 1591 aa14.71□□□□□ -0.05
CDK4-205ENST00000547853 TRPM2O94759 1503 aa14.71□□□□□ -0.06
CDK4-205ENST00000547853 NRXN3Q9Y4C0 1643 aa14.7□□□□□ -0.06
CDK4-205ENST00000547853 DCCP43146 1447 aa14.7□□□□□ -0.06
CDK4-205ENST00000547853 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
CDK4-205ENST00000547853 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
CDK4-205ENST00000547853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDK4-205ENST00000547853 LAMC1P11047 1609 aa14.69□□□□□ -0.06
CDK4-205ENST00000547853 BRINP3Q76B58 766 aa14.67□□□□□ -0.06
CDK4-205ENST00000547853 E9PCH4 1651 aa14.67□□□□□ -0.06
CDK4-205ENST00000547853 MST1RQ04912 1400 aa14.66□□□□□ -0.06
CDK4-205ENST00000547853 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
CDK4-205ENST00000547853 CADPS2Q86UW7 1296 aa14.66□□□□□ -0.06
CDK4-205ENST00000547853 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
CDK4-205ENST00000547853 ADGRL2O95490 1459 aa14.65□□□□□ -0.06
CDK4-205ENST00000547853 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
CDK4-205ENST00000547853 PTPRUQ92729 1446 aa14.65□□□□□ -0.06
CDK4-205ENST00000547853 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
CDK4-205ENST00000547853 PNPLA6Q8IY17 1366 aa14.64□□□□□ -0.07
CDK4-205ENST00000547853 IQGAP3Q86VI3 1631 aa14.64□□□□□ -0.07
CDK4-205ENST00000547853 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
CDK4-205ENST00000547853 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
CDK4-205ENST00000547853 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
CDK4-205ENST00000547853 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CDK4-205ENST00000547853 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
CDK4-205ENST00000547853 C19orf44Q9H6X5 657 aa14.63□□□□□ -0.07
CDK4-205ENST00000547853 TBX22Q9Y458 520 aa14.63□□□□□ -0.07
CDK4-205ENST00000547853 MARF1Q9Y4F3 1742 aaKnown RBP14.63□□□□□ -0.07
CDK4-205ENST00000547853 LRP5O75197 1615 aa14.63□□□□□ -0.07
CDK4-205ENST00000547853 ATF3P18847 181 aa14.62□□□□□ -0.07
CDK4-205ENST00000547853 RBM6P78332 1123 aaKnown RBP14.62□□□□□ -0.07
CDK4-205ENST00000547853 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
CDK4-205ENST00000547853 COL22A1Q8NFW1 1626 aaPredicted RBP14.62□□□□□ -0.07
CDK4-205ENST00000547853 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
CDK4-205ENST00000547853 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
CDK4-205ENST00000547853 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
CDK4-205ENST00000547853 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.58□□□□□ -0.08
CDK4-205ENST00000547853 ADGRL3Q9HAR2 1447 aa14.58□□□□□ -0.08
CDK4-205ENST00000547853 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
CDK4-205ENST00000547853 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
CDK4-205ENST00000547853 ATRNO75882 1429 aa14.56□□□□□ -0.08
CDK4-205ENST00000547853 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDK4-205ENST00000547853 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
CDK4-205ENST00000547853 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
CDK4-205ENST00000547853 BRWD3Q6RI45 1802 aa14.53□□□□□ -0.08
CDK4-205ENST00000547853 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
CDK4-205ENST00000547853 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
CDK4-205ENST00000547853 HDGFP51858 240 aaKnown RBP14.52□□□□□ -0.09
CDK4-205ENST00000547853 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
CDK4-205ENST00000547853 DDX17Q92841 729 aaKnown RBP14.52□□□□□ -0.09
CDK4-205ENST00000547853 LRRC59Q96AG4 307 aaKnown RBP14.52□□□□□ -0.09
CDK4-205ENST00000547853 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.09
CDK4-205ENST00000547853 NGLY1Q96IV0 654 aa14.51□□□□□ -0.09
CDK4-205ENST00000547853 CHIC2Q9UKJ5 165 aa14.51□□□□□ -0.09
CDK4-205ENST00000547853 MYOM2P54296 1465 aa14.5□□□□□ -0.09
CDK4-205ENST00000547853 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
CDK4-205ENST00000547853 GLI3P10071 1580 aa14.49□□□□□ -0.09
CDK4-205ENST00000547853 ADAMTS2O95450 1211 aa14.49□□□□□ -0.09
CDK4-205ENST00000547853 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
CDK4-205ENST00000547853 METP08581 1390 aa14.47□□□□□ -0.09
CDK4-205ENST00000547853 BCL9LQ86UU0 1499 aa14.47□□□□□ -0.09
CDK4-205ENST00000547853 FOXD1Q16676 465 aa14.47□□□□□ -0.09
CDK4-205ENST00000547853 USP21Q9UK80 565 aa14.47□□□□□ -0.09
CDK4-205ENST00000547853 TRPC5Q9UL62 973 aaPredicted RBP14.47□□□□□ -0.09
CDK4-205ENST00000547853 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms