RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 NEXMIFQ5QGS0 1516 aa31.18■■■□□ 2.58
RBFOX1-210ENST00000547605 VGFO15240 615 aaPredicted RBP31.17■■■□□ 2.58
RBFOX1-210ENST00000547605 TRPM1Q7Z4N2 1603 aa31.16■■■□□ 2.58
RBFOX1-210ENST00000547605 PTPRMP28827 1452 aa31.16■■■□□ 2.58
RBFOX1-210ENST00000547605 ROCK2O75116 1388 aaKnown RBP31.15■■■□□ 2.58
RBFOX1-210ENST00000547605 UBR1Q8IWV7 1749 aa31.13■■■□□ 2.57
RBFOX1-210ENST00000547605 KDM5AP29375 1690 aaKnown RBP31.13■■■□□ 2.57
RBFOX1-210ENST00000547605 CARD11Q9BXL7 1154 aa31.13■■■□□ 2.57
RBFOX1-210ENST00000547605 MYO3AQ8NEV4 1616 aa31.12■■■□□ 2.57
RBFOX1-210ENST00000547605 NBPF1Q3BBV0 1214 aa31.11■■■□□ 2.57
RBFOX1-210ENST00000547605 EIF4G2P78344 907 aaKnown RBP eCLIP31.1■■■□□ 2.57
RBFOX1-210ENST00000547605 NRXN1Q9ULB1 1477 aa31.1■■■□□ 2.57
RBFOX1-210ENST00000547605 RIMS2Q9UQ26 1411 aa31.1■■■□□ 2.57
RBFOX1-210ENST00000547605 HIRIP3Q9BW71 556 aaPredicted RBP31.09■■■□□ 2.57
RBFOX1-210ENST00000547605 ZFYVE9O95405 1425 aa31.07■■■□□ 2.56
RBFOX1-210ENST00000547605 SETD1BQ9UPS6 1966 aaKnown RBP31.07■■■□□ 2.56
RBFOX1-210ENST00000547605 HDGFP51858 240 aaKnown RBP31.06■■■□□ 2.56
RBFOX1-210ENST00000547605 CFAP70Q5T0N1 1121 aa31.06■■■□□ 2.56
RBFOX1-210ENST00000547605 PIK3C2GO75747 1445 aa31.06■■■□□ 2.56
RBFOX1-210ENST00000547605 HSPA5P11021 654 aaKnown RBP31.05■■■□□ 2.56
RBFOX1-210ENST00000547605 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.05■■■□□ 2.56
RBFOX1-210ENST00000547605 SENP3Q9H4L4 574 aaPredicted RBP31.04■■■□□ 2.56
RBFOX1-210ENST00000547605 TMEM2Q9UHN6 1383 aa31.04■■■□□ 2.56
RBFOX1-210ENST00000547605 KIAA1210Q9ULL0 1709 aa31.03■■■□□ 2.56
RBFOX1-210ENST00000547605 CEP170BQ9Y4F5 1589 aaPredicted RBP31.03■■■□□ 2.56
RBFOX1-210ENST00000547605 THEMISQ8N1K5 641 aaPredicted RBP31.03■■■□□ 2.56
RBFOX1-210ENST00000547605 GPRASP1Q5JY77 1395 aa31.02■■■□□ 2.56
RBFOX1-210ENST00000547605 USP47Q96K76 1375 aa31.02■■■□□ 2.56
RBFOX1-210ENST00000547605 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.56
RBFOX1-210ENST00000547605 C14orf93Q9H972 538 aaKnown RBP31■■■□□ 2.55
RBFOX1-210ENST00000547605 LAMC1P11047 1609 aa30.97■■■□□ 2.55
RBFOX1-210ENST00000547605 EID1Q9Y6B2 187 aa30.96■■■□□ 2.55
RBFOX1-210ENST00000547605 ZNF142P52746 1687 aaPredicted RBP30.95■■■□□ 2.55
RBFOX1-210ENST00000547605 TXNDC2Q86VQ3 553 aa30.94■■■□□ 2.54
RBFOX1-210ENST00000547605 SLIT1O75093 1534 aa30.92■■■□□ 2.54
RBFOX1-210ENST00000547605 BCANQ96GW7 911 aa30.92■■■□□ 2.54
RBFOX1-210ENST00000547605 ARHGAP23Q9P227 1491 aa30.9■■■□□ 2.54
RBFOX1-210ENST00000547605 LTKP29376 864 aa30.9■■■□□ 2.54
RBFOX1-210ENST00000547605 TMEM132EQ6IEE7 984 aa30.9■■■□□ 2.54
RBFOX1-210ENST00000547605 SETBP1Q9Y6X0 1596 aa30.9■■■□□ 2.54
RBFOX1-210ENST00000547605 ST20-MTHFSA0A0A6YYL1 179 aa30.88■■■□□ 2.53
RBFOX1-210ENST00000547605 SCAF11Q99590 1463 aaKnown RBP30.87■■■□□ 2.53
RBFOX1-210ENST00000547605 ALKQ9UM73 1620 aa30.87■■■□□ 2.53
RBFOX1-210ENST00000547605 IQGAP1P46940 1657 aa30.85■■■□□ 2.53
RBFOX1-210ENST00000547605 ADGRB1O14514 1584 aa30.84■■■□□ 2.53
RBFOX1-210ENST00000547605 PLEKHG1Q9ULL1 1385 aa30.83■■■□□ 2.53
RBFOX1-210ENST00000547605 EIF3AQ14152 1382 aaKnown RBP30.82■■■□□ 2.52
RBFOX1-210ENST00000547605 ANKLE2Q86XL3 938 aa30.8■■■□□ 2.52
RBFOX1-210ENST00000547605 TRAK1Q9UPV9 953 aa30.8■■■□□ 2.52
RBFOX1-210ENST00000547605 NRXN3Q9Y4C0 1643 aa30.8■■■□□ 2.52
RBFOX1-210ENST00000547605 ASXL1Q8IXJ9 1541 aa30.77■■■□□ 2.52
RBFOX1-210ENST00000547605 STK26Q9P289 416 aa30.77■■■□□ 2.52
RBFOX1-210ENST00000547605 SETD1AO15047 1707 aaKnown RBP30.75■■■□□ 2.51
RBFOX1-210ENST00000547605 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
RBFOX1-210ENST00000547605 ADAMTS13Q76LX8 1427 aa30.72■■■□□ 2.51
RBFOX1-210ENST00000547605 YTHDC2Q9H6S0 1430 aaKnown RBP30.72■■■□□ 2.51
RBFOX1-210ENST00000547605 SLC26A8Q96RN1 970 aa30.72■■■□□ 2.51
RBFOX1-210ENST00000547605 WASHC2AQ641Q2 1341 aa30.7■■■□□ 2.51
RBFOX1-210ENST00000547605 METP08581 1390 aa30.7■■■□□ 2.51
RBFOX1-210ENST00000547605 DIEXFQ68CQ4 756 aaKnown RBP30.7■■■□□ 2.5
RBFOX1-210ENST00000547605 TESK2Q96S53 571 aa30.69■■■□□ 2.5
RBFOX1-210ENST00000547605 POLR3GLQ9BT43 218 aa30.68■■■□□ 2.5
RBFOX1-210ENST00000547605 CENPJQ9HC77 1338 aaPredicted RBP30.68■■■□□ 2.5
RBFOX1-210ENST00000547605 CCDC7Q96M83 1385 aa30.67■■■□□ 2.5
RBFOX1-210ENST00000547605 POLR1AO95602 1720 aaPredicted RBP30.66■■■□□ 2.5
RBFOX1-210ENST00000547605 KIF7Q2M1P5 1343 aa30.66■■■□□ 2.5
RBFOX1-210ENST00000547605 ARHGEF28Q8N1W1 1705 aaKnown RBP30.66■■■□□ 2.5
RBFOX1-210ENST00000547605 DDX10Q13206 875 aaKnown RBP30.66■■■□□ 2.5
RBFOX1-210ENST00000547605 TBX22Q9Y458 520 aa30.66■■■□□ 2.5
RBFOX1-210ENST00000547605 TMF1P82094 1093 aa30.65■■■□□ 2.5
RBFOX1-210ENST00000547605 LRPPRCP42704 1394 aaKnown RBP30.65■■■□□ 2.5
RBFOX1-210ENST00000547605 MED14O60244 1454 aa30.65■■■□□ 2.5
RBFOX1-210ENST00000547605 NCKAP5LQ9HCH0 1330 aa30.64■■■□□ 2.5
RBFOX1-210ENST00000547605 DIP2AQ14689 1571 aa30.63■■■□□ 2.49
RBFOX1-210ENST00000547605 HSPA2P54652 639 aa30.62■■■□□ 2.49
RBFOX1-210ENST00000547605 POGKQ9P215 609 aa30.61■■■□□ 2.49
RBFOX1-210ENST00000547605 ABCC11Q96J66 1382 aa30.6■■■□□ 2.49
RBFOX1-210ENST00000547605 SLC24A1O60721 1099 aa30.6■■■□□ 2.49
RBFOX1-210ENST00000547605 NPHP4O75161 1426 aaPredicted RBP30.6■■■□□ 2.49
RBFOX1-210ENST00000547605 QRICH2Q9H0J4 1663 aa30.59■■■□□ 2.49
RBFOX1-210ENST00000547605 LMTK3Q96Q04 1460 aa30.59■■■□□ 2.49
RBFOX1-210ENST00000547605 SAFB2Q14151 953 aaKnown RBP eCLIP30.59■■■□□ 2.49
RBFOX1-210ENST00000547605 PRAM1Q96QH2 718 aa30.59■■■□□ 2.49
RBFOX1-210ENST00000547605 DISP3Q9P2K9 1392 aa30.59■■■□□ 2.49
RBFOX1-210ENST00000547605 DLC1Q96QB1 1528 aa30.55■■■□□ 2.48
RBFOX1-210ENST00000547605 SBNO2Q9Y2G9 1366 aa30.55■■■□□ 2.48
RBFOX1-210ENST00000547605 KNDC1Q76NI1 1749 aa30.53■■■□□ 2.48
RBFOX1-210ENST00000547605 CDCA8Q53HL2 280 aa30.53■■■□□ 2.48
RBFOX1-210ENST00000547605 WAPLQ7Z5K2 1190 aa30.52■■■□□ 2.48
RBFOX1-210ENST00000547605 AMOTL2Q9Y2J4 779 aa30.52■■■□□ 2.48
RBFOX1-210ENST00000547605 PTPRUQ92729 1446 aa30.52■■■□□ 2.48
RBFOX1-210ENST00000547605 TECPR2O15040 1411 aa30.51■■■□□ 2.47
RBFOX1-210ENST00000547605 PIK3R4Q99570 1358 aa30.5■■■□□ 2.47
RBFOX1-210ENST00000547605 CPS1P31327 1500 aa30.48■■■□□ 2.47
RBFOX1-210ENST00000547605 SIRT1Q96EB6 747 aa30.48■■■□□ 2.47
RBFOX1-210ENST00000547605 MINK1Q8N4C8 1332 aaPredicted RBP30.48■■■□□ 2.47
RBFOX1-210ENST00000547605 PLEKHH1Q9ULM0 1364 aa30.47■■■□□ 2.47
RBFOX1-210ENST00000547605 FAM135BQ49AJ0 1406 aa30.47■■■□□ 2.47
RBFOX1-210ENST00000547605 ROBO2Q9HCK4 1378 aa30.46■■■□□ 2.47
RBFOX1-210ENST00000547605 EVC2Q86UK5 1308 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms