RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
LINC00485-201ENST00000547179 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 ADGRF5Q8IZF2 1346 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 NLRP1Q9C000 1473 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 CDCA8Q53HL2 280 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 EID1Q9Y6B2 187 aa15.46■□□□□ 0.07
LINC00485-201ENST00000547179 FER1L4A9Z1Z3 1794 aa15.46■□□□□ 0.06
LINC00485-201ENST00000547179 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
LINC00485-201ENST00000547179 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
LINC00485-201ENST00000547179 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
LINC00485-201ENST00000547179 THEMISQ8N1K5 641 aaPredicted RBP15.44■□□□□ 0.06
LINC00485-201ENST00000547179 TRPM1Q7Z4N2 1603 aa15.44■□□□□ 0.06
LINC00485-201ENST00000547179 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
LINC00485-201ENST00000547179 TMF1P82094 1093 aa15.44■□□□□ 0.06
LINC00485-201ENST00000547179 C14orf93Q9H972 538 aaKnown RBP15.44■□□□□ 0.06
LINC00485-201ENST00000547179 MADDQ8WXG6 1647 aa15.44■□□□□ 0.06
LINC00485-201ENST00000547179 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
LINC00485-201ENST00000547179 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
LINC00485-201ENST00000547179 SCAF11Q99590 1463 aaKnown RBP15.42■□□□□ 0.06
LINC00485-201ENST00000547179 LAMC1P11047 1609 aa15.42■□□□□ 0.06
LINC00485-201ENST00000547179 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
LINC00485-201ENST00000547179 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
LINC00485-201ENST00000547179 TMEM131LA2VDJ0 1609 aa15.4■□□□□ 0.06
LINC00485-201ENST00000547179 CCDC7Q96M83 1385 aa15.4■□□□□ 0.06
LINC00485-201ENST00000547179 ANP32CO43423 234 aa15.4■□□□□ 0.06
LINC00485-201ENST00000547179 PPLO60437 1756 aa15.4■□□□□ 0.06
LINC00485-201ENST00000547179 NRXN1Q9ULB1 1477 aa15.39■□□□□ 0.05
LINC00485-201ENST00000547179 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
LINC00485-201ENST00000547179 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
LINC00485-201ENST00000547179 IFT172Q9UG01 1749 aa15.37■□□□□ 0.05
LINC00485-201ENST00000547179 WASHC2AQ641Q2 1341 aa15.36■□□□□ 0.05
LINC00485-201ENST00000547179 TXNDC2Q86VQ3 553 aa15.36■□□□□ 0.05
LINC00485-201ENST00000547179 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
LINC00485-201ENST00000547179 RIMS1Q86UR5 1692 aaKnown RBP15.36■□□□□ 0.05
LINC00485-201ENST00000547179 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
LINC00485-201ENST00000547179 C3P01024 1663 aa15.36■□□□□ 0.05
LINC00485-201ENST00000547179 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
LINC00485-201ENST00000547179 SETBP1Q9Y6X0 1596 aa15.35■□□□□ 0.05
LINC00485-201ENST00000547179 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
LINC00485-201ENST00000547179 POGKQ9P215 609 aa15.34■□□□□ 0.05
LINC00485-201ENST00000547179 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
LINC00485-201ENST00000547179 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
LINC00485-201ENST00000547179 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
LINC00485-201ENST00000547179 STK26Q9P289 416 aa15.32■□□□□ 0.04
LINC00485-201ENST00000547179 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
LINC00485-201ENST00000547179 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
LINC00485-201ENST00000547179 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
LINC00485-201ENST00000547179 SETD1BQ9UPS6 1966 aaKnown RBP15.3■□□□□ 0.04
LINC00485-201ENST00000547179 MIER1Q8N108 512 aa15.3■□□□□ 0.04
LINC00485-201ENST00000547179 C11orf95C9JLR9 678 aaPredicted RBP15.28■□□□□ 0.04
LINC00485-201ENST00000547179 TESK2Q96S53 571 aa15.28■□□□□ 0.04
LINC00485-201ENST00000547179 PLEKHG1Q9ULL1 1385 aa15.28■□□□□ 0.04
LINC00485-201ENST00000547179 IQGAP1P46940 1657 aa15.27■□□□□ 0.04
LINC00485-201ENST00000547179 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
LINC00485-201ENST00000547179 UBR1Q8IWV7 1749 aa15.27■□□□□ 0.04
LINC00485-201ENST00000547179 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.03
LINC00485-201ENST00000547179 PTPRMP28827 1452 aa15.26■□□□□ 0.03
LINC00485-201ENST00000547179 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
LINC00485-201ENST00000547179 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
LINC00485-201ENST00000547179 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
LINC00485-201ENST00000547179 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
LINC00485-201ENST00000547179 POLR1AO95602 1720 aaPredicted RBP15.25■□□□□ 0.03
LINC00485-201ENST00000547179 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
LINC00485-201ENST00000547179 TBX22Q9Y458 520 aa15.24■□□□□ 0.03
LINC00485-201ENST00000547179 SLIT1O75093 1534 aa15.24■□□□□ 0.03
LINC00485-201ENST00000547179 ADGRB1O14514 1584 aa15.23■□□□□ 0.03
LINC00485-201ENST00000547179 LTKP29376 864 aa15.23■□□□□ 0.03
LINC00485-201ENST00000547179 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
LINC00485-201ENST00000547179 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
LINC00485-201ENST00000547179 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
LINC00485-201ENST00000547179 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
LINC00485-201ENST00000547179 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
LINC00485-201ENST00000547179 SIRT1Q96EB6 747 aa15.22■□□□□ 0.03
LINC00485-201ENST00000547179 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC00485-201ENST00000547179 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
LINC00485-201ENST00000547179 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
LINC00485-201ENST00000547179 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
LINC00485-201ENST00000547179 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
LINC00485-201ENST00000547179 SLC26A8Q96RN1 970 aa15.19■□□□□ 0.02
LINC00485-201ENST00000547179 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
LINC00485-201ENST00000547179 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
LINC00485-201ENST00000547179 PANK3Q9H999 370 aa15.17■□□□□ 0.02
LINC00485-201ENST00000547179 KTN1Q86UP2 1357 aaKnown RBP15.17■□□□□ 0.02
LINC00485-201ENST00000547179 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
LINC00485-201ENST00000547179 RALBP1Q15311 655 aa15.16■□□□□ 0.02
LINC00485-201ENST00000547179 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
LINC00485-201ENST00000547179 DIP2AQ14689 1571 aa15.16■□□□□ 0.02
LINC00485-201ENST00000547179 ZNF142P52746 1687 aaPredicted RBP15.16■□□□□ 0.02
LINC00485-201ENST00000547179 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
LINC00485-201ENST00000547179 METP08581 1390 aa15.15■□□□□ 0.02
LINC00485-201ENST00000547179 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
LINC00485-201ENST00000547179 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
LINC00485-201ENST00000547179 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
LINC00485-201ENST00000547179 AMOTL2Q9Y2J4 779 aa15.14■□□□□ 0.01
LINC00485-201ENST00000547179 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
LINC00485-201ENST00000547179 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
LINC00485-201ENST00000547179 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
LINC00485-201ENST00000547179 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
LINC00485-201ENST00000547179 ASXL1Q8IXJ9 1541 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms