RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
NPAS3-205ENST00000547068 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
NPAS3-205ENST00000547068 HECW2Q9P2P5 1572 aa13.94□□□□□ -0.18
NPAS3-205ENST00000547068 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
NPAS3-205ENST00000547068 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
NPAS3-205ENST00000547068 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
NPAS3-205ENST00000547068 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
NPAS3-205ENST00000547068 PLXNC1O60486 1568 aa13.93□□□□□ -0.18
NPAS3-205ENST00000547068 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
NPAS3-205ENST00000547068 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
NPAS3-205ENST00000547068 KIDINS220Q9ULH0 1771 aa13.93□□□□□ -0.18
NPAS3-205ENST00000547068 CENPQQ7L2Z9 268 aaPredicted RBP13.93□□□□□ -0.18
NPAS3-205ENST00000547068 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
NPAS3-205ENST00000547068 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
NPAS3-205ENST00000547068 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
NPAS3-205ENST00000547068 DUOX2Q9NRD8 1548 aa13.91□□□□□ -0.18
NPAS3-205ENST00000547068 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
NPAS3-205ENST00000547068 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
NPAS3-205ENST00000547068 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
NPAS3-205ENST00000547068 CARD11Q9BXL7 1154 aa13.9□□□□□ -0.18
NPAS3-205ENST00000547068 POGKQ9P215 609 aa13.89□□□□□ -0.19
NPAS3-205ENST00000547068 L1TD1Q5T7N2 865 aaKnown RBP13.88□□□□□ -0.19
NPAS3-205ENST00000547068 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
NPAS3-205ENST00000547068 A2MP01023 1474 aa13.88□□□□□ -0.19
NPAS3-205ENST00000547068 YEATS2Q9ULM3 1422 aa13.87□□□□□ -0.19
NPAS3-205ENST00000547068 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
NPAS3-205ENST00000547068 PZPP20742 1482 aa13.87□□□□□ -0.19
NPAS3-205ENST00000547068 ATP10AO60312 1499 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 KIF3BO15066 747 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 RGS3P49796 1198 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
NPAS3-205ENST00000547068 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
NPAS3-205ENST00000547068 E9PCH4 1651 aa13.84□□□□□ -0.19
NPAS3-205ENST00000547068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
NPAS3-205ENST00000547068 UHRF1BP1Q6BDS2 1440 aa13.84□□□□□ -0.19
NPAS3-205ENST00000547068 ZMYND15Q9H091 742 aa13.84□□□□□ -0.19
NPAS3-205ENST00000547068 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
NPAS3-205ENST00000547068 BLMP54132 1417 aaPredicted RBP13.83□□□□□ -0.2
NPAS3-205ENST00000547068 PKD2Q13563 968 aa13.82□□□□□ -0.2
NPAS3-205ENST00000547068 NUP155O75694 1391 aa13.82□□□□□ -0.2
NPAS3-205ENST00000547068 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
NPAS3-205ENST00000547068 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
NPAS3-205ENST00000547068 INSRP06213 1382 aa13.81□□□□□ -0.2
NPAS3-205ENST00000547068 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
NPAS3-205ENST00000547068 GGT6Q6P531 493 aa13.81□□□□□ -0.2
NPAS3-205ENST00000547068 PNNQ9H307 717 aaKnown RBP13.81□□□□□ -0.2
NPAS3-205ENST00000547068 KANK1Q14678 1352 aa13.8□□□□□ -0.2
NPAS3-205ENST00000547068 BECN1Q14457 450 aa13.8□□□□□ -0.2
NPAS3-205ENST00000547068 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
NPAS3-205ENST00000547068 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
NPAS3-205ENST00000547068 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.79□□□□□ -0.2
NPAS3-205ENST00000547068 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
NPAS3-205ENST00000547068 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
NPAS3-205ENST00000547068 RRP9O43818 475 aaKnown RBP13.79□□□□□ -0.2
NPAS3-205ENST00000547068 ARXQ96QS3 562 aa13.78□□□□□ -0.2
NPAS3-205ENST00000547068 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
NPAS3-205ENST00000547068 CC2D1BQ5T0F9 858 aaKnown RBP13.78□□□□□ -0.2
NPAS3-205ENST00000547068 USP19O94966 1318 aa13.77□□□□□ -0.21
NPAS3-205ENST00000547068 CLCN1P35523 988 aa13.77□□□□□ -0.21
NPAS3-205ENST00000547068 UNC13BO14795 1591 aa13.76□□□□□ -0.21
NPAS3-205ENST00000547068 GOLGA6L3A6NEY3 463 aa13.76□□□□□ -0.21
NPAS3-205ENST00000547068 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPAS3-205ENST00000547068 AGLP35573 1532 aa13.76□□□□□ -0.21
NPAS3-205ENST00000547068 DUSP27Q5VZP5 1158 aa13.75□□□□□ -0.21
NPAS3-205ENST00000547068 MLECQ14165 292 aa13.75□□□□□ -0.21
NPAS3-205ENST00000547068 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
NPAS3-205ENST00000547068 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
NPAS3-205ENST00000547068 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
NPAS3-205ENST00000547068 ESF1Q9H501 851 aaKnown RBP13.74□□□□□ -0.21
NPAS3-205ENST00000547068 KDM5DQ9BY66 1539 aa13.74□□□□□ -0.21
NPAS3-205ENST00000547068 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
NPAS3-205ENST00000547068 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
NPAS3-205ENST00000547068 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
NPAS3-205ENST00000547068 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
NPAS3-205ENST00000547068 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
NPAS3-205ENST00000547068 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
NPAS3-205ENST00000547068 SEC24BO95487 1268 aa13.72□□□□□ -0.21
NPAS3-205ENST00000547068 FSD2A1L4K1 749 aa13.71□□□□□ -0.21
NPAS3-205ENST00000547068 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
NPAS3-205ENST00000547068 PANK2Q9BZ23 570 aa13.71□□□□□ -0.21
NPAS3-205ENST00000547068 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.22
NPAS3-205ENST00000547068 MROH1Q8NDA8 1641 aa13.7□□□□□ -0.22
NPAS3-205ENST00000547068 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
NPAS3-205ENST00000547068 SIGLEC1Q9BZZ2 1709 aa13.69□□□□□ -0.22
NPAS3-205ENST00000547068 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
NPAS3-205ENST00000547068 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
NPAS3-205ENST00000547068 IGHDP01880 384 aa13.68□□□□□ -0.22
NPAS3-205ENST00000547068 PANK3Q9H999 370 aa13.68□□□□□ -0.22
NPAS3-205ENST00000547068 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
NPAS3-205ENST00000547068 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPAS3-205ENST00000547068 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
NPAS3-205ENST00000547068 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
NPAS3-205ENST00000547068 TET3O43151 1660 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 MCM4P33991 863 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 CEP152O94986 1710 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms