RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 NBPF4Q96M43 638 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 GEMIN8Q9NWZ8 242 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 RAI14Q9P0K7 980 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 ABCF2Q9UG63 623 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 SYNPO2Q9UMS6 1093 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 MYCNP04198 464 aaPredicted RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 MAP2K1Q02750 393 aaPredicted RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 SEMA3FQ13275 785 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 TBC1D10BQ4KMP7 808 aaPredicted RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 C4orf46Q504U0 113 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 GJC2Q5T442 439 aaPredicted RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 UTP14CQ5TAP6 766 aaKnown RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 SND1Q7KZF4 910 aaKnown RBP eCLIP2.51□□□□□ -2.01
CFTR-207ENST00000546407 DDX46Q7L014 1031 aaKnown RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 ARMCX6Q7L4S7 300 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 AMOTL1Q8IY63 956 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 IL27Q8NEV9 243 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 PDCL3Q9H2J4 239 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 GPBP1L1Q9HC44 474 aaPredicted RBP2.51□□□□□ -2.01
CFTR-207ENST00000546407 ARHGEF10LQ9HCE6 1279 aa2.51□□□□□ -2.01
CFTR-207ENST00000546407 CCDC194A0A1B0GVG4 234 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 BICDL2A1A5D9 508 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 SOX12O15370 315 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 CBFA2T2O43439 604 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 PEX14O75381 377 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 ZMYND10O75800 440 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 POLD1P28340 1107 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 RHBDL3P58872 404 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 ZRSR2Q15696 482 aaKnown RBP2.5□□□□□ -2.01
CFTR-207ENST00000546407 CDC37Q16543 378 aaPredicted RBP2.5□□□□□ -2.01
CFTR-207ENST00000546407 HSP90AB2PQ58FF8 381 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 ZKSCAN2Q63HK3 967 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 PROSER2Q86WR7 435 aaPredicted RBP2.5□□□□□ -2.01
CFTR-207ENST00000546407 SMAP1Q8IYB5 467 aaPredicted RBP2.5□□□□□ -2.01
CFTR-207ENST00000546407 FAM43AQ8N2R8 423 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 CLUAP1Q96AJ1 413 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 PAIP2Q9BPZ3 127 aaKnown RBP2.5□□□□□ -2.01
CFTR-207ENST00000546407 KDM4CQ9H3R0 1056 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 SWAP70Q9UH65 585 aa2.5□□□□□ -2.01
CFTR-207ENST00000546407 SYNRGQ9UMZ2 1314 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 GOLGA6CA6NDK9 693 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 GOLGA6BA6NDN3 693 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 GOLGA6L3A6NEY3 463 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 IRF6O14896 467 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 DHX16O60231 1041 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 STK10O94804 968 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 KIF20AO95235 890 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 KIF4AO95239 1232 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 MAP4K4O95819 1239 aaPredicted RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 GOLGA6DP0CG33 693 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 VDRP11473 427 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 NEFHP12036 1026 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 SCP2P22307 547 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 PAX3P23760 479 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 ZC3H6P61129 1189 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 PSMC1P62191 440 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 SATB1Q01826 763 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 POU5F1Q01860 360 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 UVSSAQ2YD98 709 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 PUS10Q3MIT2 529 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 CDCA8Q53HL2 280 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 PCGF5Q86SE9 256 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 CCAR1Q8IX12 1150 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 PLCD3Q8N3E9 789 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 KCNV2Q8TDN2 545 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 EVI5LQ96CN4 794 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 SCYL1Q96KG9 808 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 AK7Q96M32 723 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 FAM210AQ96ND0 272 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 MAP7D2Q96T17 732 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 IRF2BPLQ9H1B7 796 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 GNL3LQ9NVN8 582 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 GOLGA6AQ9NYA3 693 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 KIAA1522Q9P206 1035 aaPredicted RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 PNMA2Q9UL42 364 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 TPX2Q9ULW0 747 aaKnown RBP2.49□□□□□ -2.01
CFTR-207ENST00000546407 USTQ9Y2C2 406 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 IGF1RP08069 1367 aa2.49□□□□□ -2.01
CFTR-207ENST00000546407 RPGRIP1LQ68CZ1 1315 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 WASHC2CQ9Y4E1 1318 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 CFAP69A5D8W1 941 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 U2SURPO15042 1029 aaKnown RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 GTPBP6O43824 516 aaPredicted RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 ZNF500O60304 480 aaPredicted RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 FAM200BP0CF97 657 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 BDNFP23560 247 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 TNNT2P45379 298 aaPredicted RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 RGS3P49796 1198 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 PPP4CP60510 307 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 SF3B2Q13435 895 aaKnown RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 HSP90B2PQ58FF3 399 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 ICE2Q659A1 982 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 GIMAP6Q6P9H5 292 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 NOP9Q86U38 636 aaKnown RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 RPAINQ86UA6 219 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 MRRFQ96E11 262 aaKnown RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 SPOCK3Q9BQ16 436 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 CDCA7Q9BWT1 371 aaPredicted RBP2.48□□□□□ -2.01
CFTR-207ENST00000546407 PCGF6Q9BYE7 350 aa2.48□□□□□ -2.01
CFTR-207ENST00000546407 BRINP2Q9C0B6 783 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms