RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
SKP2-208ENST00000546211 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
SKP2-208ENST00000546211 STAG3Q9UJ98 1225 aa27.26■■□□□ 1.96
SKP2-208ENST00000546211 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.95
SKP2-208ENST00000546211 TNRQ92752 1358 aa27.25■■□□□ 1.95
SKP2-208ENST00000546211 VGFO15240 615 aaPredicted RBP27.23■■□□□ 1.95
SKP2-208ENST00000546211 MYO5BQ9ULV0 1848 aa27.21■■□□□ 1.95
SKP2-208ENST00000546211 DDX10Q13206 875 aaKnown RBP27.2■■□□□ 1.94
SKP2-208ENST00000546211 PIK3C2GO75747 1445 aa27.2■■□□□ 1.94
SKP2-208ENST00000546211 C3P01024 1663 aa27.19■■□□□ 1.94
SKP2-208ENST00000546211 ZFYVE9O95405 1425 aa27.18■■□□□ 1.94
SKP2-208ENST00000546211 A2ML1A8K2U0 1454 aa27.18■■□□□ 1.94
SKP2-208ENST00000546211 WASHC2AQ641Q2 1341 aa27.18■■□□□ 1.94
SKP2-208ENST00000546211 ST20-MTHFSA0A0A6YYL1 179 aa27.18■■□□□ 1.94
SKP2-208ENST00000546211 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
SKP2-208ENST00000546211 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
SKP2-208ENST00000546211 CCDC7Q96M83 1385 aa27.15■■□□□ 1.94
SKP2-208ENST00000546211 POLR1AO95602 1720 aaPredicted RBP27.15■■□□□ 1.94
SKP2-208ENST00000546211 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.94
SKP2-208ENST00000546211 NUTM2DQ5VT03 806 aaPredicted RBP27.14■■□□□ 1.94
SKP2-208ENST00000546211 IQGAP1P46940 1657 aa27.13■■□□□ 1.93
SKP2-208ENST00000546211 NLRP1Q9C000 1473 aa27.13■■□□□ 1.93
SKP2-208ENST00000546211 C11orf95C9JLR9 678 aaPredicted RBP27.13■■□□□ 1.93
SKP2-208ENST00000546211 C14orf93Q9H972 538 aaKnown RBP27.13■■□□□ 1.93
SKP2-208ENST00000546211 SETBP1Q9Y6X0 1596 aa27.12■■□□□ 1.93
SKP2-208ENST00000546211 KDM5AP29375 1690 aaKnown RBP27.12■■□□□ 1.93
SKP2-208ENST00000546211 KIF7Q2M1P5 1343 aa27.11■■□□□ 1.93
SKP2-208ENST00000546211 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
SKP2-208ENST00000546211 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
SKP2-208ENST00000546211 EIF3AQ14152 1382 aaKnown RBP27.1■■□□□ 1.93
SKP2-208ENST00000546211 RIMS2Q9UQ26 1411 aa27.09■■□□□ 1.93
SKP2-208ENST00000546211 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
SKP2-208ENST00000546211 MIER1Q8N108 512 aa27.06■■□□□ 1.92
SKP2-208ENST00000546211 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.06■■□□□ 1.92
SKP2-208ENST00000546211 UBR1Q8IWV7 1749 aa27.06■■□□□ 1.92
SKP2-208ENST00000546211 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
SKP2-208ENST00000546211 ADGRB1O14514 1584 aa27.03■■□□□ 1.92
SKP2-208ENST00000546211 TESK2Q96S53 571 aa27.01■■□□□ 1.92
SKP2-208ENST00000546211 POLR3GLQ9BT43 218 aa27■■□□□ 1.91
SKP2-208ENST00000546211 TMEM2Q9UHN6 1383 aa26.99■■□□□ 1.91
SKP2-208ENST00000546211 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
SKP2-208ENST00000546211 TMF1P82094 1093 aa26.98■■□□□ 1.91
SKP2-208ENST00000546211 TMEM132EQ6IEE7 984 aa26.97■■□□□ 1.91
SKP2-208ENST00000546211 ALKQ9UM73 1620 aa26.95■■□□□ 1.9
SKP2-208ENST00000546211 SLC24A1O60721 1099 aa26.95■■□□□ 1.9
SKP2-208ENST00000546211 SENP3Q9H4L4 574 aaPredicted RBP26.93■■□□□ 1.9
SKP2-208ENST00000546211 TRAK1Q9UPV9 953 aa26.93■■□□□ 1.9
SKP2-208ENST00000546211 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
SKP2-208ENST00000546211 THEMISQ8N1K5 641 aaPredicted RBP26.92■■□□□ 1.9
SKP2-208ENST00000546211 ASXL1Q8IXJ9 1541 aa26.91■■□□□ 1.9
SKP2-208ENST00000546211 ANP32CO43423 234 aa26.91■■□□□ 1.9
SKP2-208ENST00000546211 CENPJQ9HC77 1338 aaPredicted RBP26.91■■□□□ 1.9
SKP2-208ENST00000546211 SLIT1O75093 1534 aa26.89■■□□□ 1.9
SKP2-208ENST00000546211 CEP170BQ9Y4F5 1589 aaPredicted RBP26.89■■□□□ 1.89
SKP2-208ENST00000546211 CDCA8Q53HL2 280 aa26.88■■□□□ 1.89
SKP2-208ENST00000546211 EID1Q9Y6B2 187 aa26.88■■□□□ 1.89
SKP2-208ENST00000546211 ARHGAP23Q9P227 1491 aa26.88■■□□□ 1.89
SKP2-208ENST00000546211 SBNO2Q9Y2G9 1366 aa26.87■■□□□ 1.89
SKP2-208ENST00000546211 YTHDC2Q9H6S0 1430 aaKnown RBP26.86■■□□□ 1.89
SKP2-208ENST00000546211 NRXN3Q9Y4C0 1643 aa26.85■■□□□ 1.89
SKP2-208ENST00000546211 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
SKP2-208ENST00000546211 PTPRMP28827 1452 aa26.85■■□□□ 1.89
SKP2-208ENST00000546211 ARHGEF28Q8N1W1 1705 aaKnown RBP26.85■■□□□ 1.89
SKP2-208ENST00000546211 BCANQ96GW7 911 aa26.84■■□□□ 1.89
SKP2-208ENST00000546211 PLEKHG1Q9ULL1 1385 aa26.84■■□□□ 1.89
SKP2-208ENST00000546211 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
SKP2-208ENST00000546211 STK26Q9P289 416 aa26.84■■□□□ 1.89
SKP2-208ENST00000546211 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
SKP2-208ENST00000546211 QRICH2Q9H0J4 1663 aa26.82■■□□□ 1.88
SKP2-208ENST00000546211 LTKP29376 864 aa26.82■■□□□ 1.88
SKP2-208ENST00000546211 LRPPRCP42704 1394 aaKnown RBP26.78■■□□□ 1.88
SKP2-208ENST00000546211 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
SKP2-208ENST00000546211 DLC1Q96QB1 1528 aa26.75■■□□□ 1.87
SKP2-208ENST00000546211 ADAMTS13Q76LX8 1427 aa26.75■■□□□ 1.87
SKP2-208ENST00000546211 METP08581 1390 aa26.75■■□□□ 1.87
SKP2-208ENST00000546211 POGKQ9P215 609 aa26.74■■□□□ 1.87
SKP2-208ENST00000546211 ABCC11Q96J66 1382 aa26.74■■□□□ 1.87
SKP2-208ENST00000546211 PRAM1Q96QH2 718 aa26.72■■□□□ 1.87
SKP2-208ENST00000546211 CCER2I3L3R5 266 aa26.71■■□□□ 1.87
SKP2-208ENST00000546211 EVC2Q86UK5 1308 aa26.7■■□□□ 1.87
SKP2-208ENST00000546211 MED14O60244 1454 aa26.7■■□□□ 1.86
SKP2-208ENST00000546211 SAFB2Q14151 953 aaKnown RBP eCLIP26.69■■□□□ 1.86
SKP2-208ENST00000546211 DIP2AQ14689 1571 aa26.69■■□□□ 1.86
SKP2-208ENST00000546211 ANKLE2Q86XL3 938 aa26.68■■□□□ 1.86
SKP2-208ENST00000546211 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
SKP2-208ENST00000546211 KNDC1Q76NI1 1749 aa26.68■■□□□ 1.86
SKP2-208ENST00000546211 PANK3Q9H999 370 aa26.67■■□□□ 1.86
SKP2-208ENST00000546211 TBX22Q9Y458 520 aa26.67■■□□□ 1.86
SKP2-208ENST00000546211 TECPR2O15040 1411 aa26.66■■□□□ 1.86
SKP2-208ENST00000546211 PUS7Q96PZ0 661 aaKnown RBP26.66■■□□□ 1.86
SKP2-208ENST00000546211 SLC26A8Q96RN1 970 aa26.66■■□□□ 1.86
SKP2-208ENST00000546211 TULP4Q9NRJ4 1543 aa26.65■■□□□ 1.86
SKP2-208ENST00000546211 MYOM1P52179 1685 aa26.65■■□□□ 1.86
SKP2-208ENST00000546211 SIRT1Q96EB6 747 aa26.65■■□□□ 1.86
SKP2-208ENST00000546211 CPS1P31327 1500 aa26.64■■□□□ 1.86
SKP2-208ENST00000546211 FAM135BQ49AJ0 1406 aa26.63■■□□□ 1.85
SKP2-208ENST00000546211 MINK1Q8N4C8 1332 aaPredicted RBP26.63■■□□□ 1.85
SKP2-208ENST00000546211 PER1O15534 1290 aaPredicted RBP26.61■■□□□ 1.85
SKP2-208ENST00000546211 WAPLQ7Z5K2 1190 aa26.6■■□□□ 1.85
SKP2-208ENST00000546211 PLEKHH1Q9ULM0 1364 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms