RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 COPS2P61201 443 aa6.64□□□□□ -1.35
CUL3-215ENST00000546102 ZNF516Q92618 1163 aa6.63□□□□□ -1.35
CUL3-215ENST00000546102 C3orf80F5H4A9 247 aa6.62□□□□□ -1.35
CUL3-215ENST00000546102 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
CUL3-215ENST00000546102 TMUB1Q9BVT8 246 aa6.61□□□□□ -1.35
CUL3-215ENST00000546102 PCDHB3Q9Y5E6 796 aa6.61□□□□□ -1.35
CUL3-215ENST00000546102 TTC13Q8NBP0 860 aa6.6□□□□□ -1.35
CUL3-215ENST00000546102 RBM46Q8TBY0 533 aaKnown RBP6.6□□□□□ -1.35
CUL3-215ENST00000546102 ARHGEF1Q92888 912 aaKnown RBP6.6□□□□□ -1.35
CUL3-215ENST00000546102 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
CUL3-215ENST00000546102 ZPR1O75312 459 aa6.59□□□□□ -1.35
CUL3-215ENST00000546102 DNAJB2P25686 324 aa6.59□□□□□ -1.35
CUL3-215ENST00000546102 KMT5BQ4FZB7 885 aa6.59□□□□□ -1.35
CUL3-215ENST00000546102 NKX2-3Q8TAU0 364 aa6.59□□□□□ -1.35
CUL3-215ENST00000546102 NPDC1Q9NQX5 325 aaPredicted RBP6.59□□□□□ -1.35
CUL3-215ENST00000546102 HOMEZQ8IX15 550 aa6.57□□□□□ -1.36
CUL3-215ENST00000546102 EYA1Q99502 592 aa6.57□□□□□ -1.36
CUL3-215ENST00000546102 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
CUL3-215ENST00000546102 MLLT3P42568 568 aaPredicted RBP6.55□□□□□ -1.36
CUL3-215ENST00000546102 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
CUL3-215ENST00000546102 SLC19A1P41440 591 aa6.54□□□□□ -1.36
CUL3-215ENST00000546102 PTGDRQ13258 359 aa6.54□□□□□ -1.36
CUL3-215ENST00000546102 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
CUL3-215ENST00000546102 ZNF787Q6DD87 383 aa6.54□□□□□ -1.36
CUL3-215ENST00000546102 BLOC1S3Q6QNY0 202 aa6.54□□□□□ -1.36
CUL3-215ENST00000546102 TMEM134Q9H6X4 195 aa6.53□□□□□ -1.36
CUL3-215ENST00000546102 RNF223E7ERA6 249 aa6.52□□□□□ -1.37
CUL3-215ENST00000546102 ACTN4O43707 911 aaKnown RBP6.52□□□□□ -1.37
CUL3-215ENST00000546102 CFHP08603 1231 aa6.52□□□□□ -1.37
CUL3-215ENST00000546102 PKDCCQ504Y2 493 aa6.52□□□□□ -1.37
CUL3-215ENST00000546102 LMOD2Q6P5Q4 547 aa6.52□□□□□ -1.37
CUL3-215ENST00000546102 KCNV2Q8TDN2 545 aa6.52□□□□□ -1.37
CUL3-215ENST00000546102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.51□□□□□ -1.37
CUL3-215ENST00000546102 RCCD1A6NED2 376 aa6.51□□□□□ -1.37
CUL3-215ENST00000546102 NR1I2O75469 434 aa6.51□□□□□ -1.37
CUL3-215ENST00000546102 FCHSD2O94868 740 aa6.51□□□□□ -1.37
CUL3-215ENST00000546102 ANKLE1Q8NAG6 615 aa6.51□□□□□ -1.37
CUL3-215ENST00000546102 ADGRG1Q9Y653 693 aa6.51□□□□□ -1.37
CUL3-215ENST00000546102 LCE2BO14633 110 aa6.5□□□□□ -1.37
CUL3-215ENST00000546102 TLL1O43897 1013 aa6.5□□□□□ -1.37
CUL3-215ENST00000546102 ZNF598Q86UK7 904 aaKnown RBP6.5□□□□□ -1.37
CUL3-215ENST00000546102 S1PR4O95977 384 aa6.49□□□□□ -1.37
CUL3-215ENST00000546102 OATP04181 439 aa6.49□□□□□ -1.37
CUL3-215ENST00000546102 SPRYD7Q5W111 196 aa6.49□□□□□ -1.37
CUL3-215ENST00000546102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.37
CUL3-215ENST00000546102 ADH1BP00325 375 aa6.48□□□□□ -1.37
CUL3-215ENST00000546102 ZNF697Q5TEC3 545 aa6.48□□□□□ -1.37
CUL3-215ENST00000546102 SMYD5Q6GMV2 418 aa6.48□□□□□ -1.37
CUL3-215ENST00000546102 SLC6A16Q9GZN6 736 aa6.48□□□□□ -1.37
CUL3-215ENST00000546102 DGAT1O75907 488 aa6.47□□□□□ -1.37
CUL3-215ENST00000546102 BRPF1P55201 1214 aaPredicted RBP6.47□□□□□ -1.37
CUL3-215ENST00000546102 PPEF1O14829 653 aaPredicted RBP6.46□□□□□ -1.38
CUL3-215ENST00000546102 PRR20EP86478 221 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 PRR20CP86479 221 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 PRR20DP86480 221 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 PRR20BP86481 221 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 PRR20AP86496 221 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 FAM161AQ3B820 660 aa6.46□□□□□ -1.38
CUL3-215ENST00000546102 FAM187AA6NFU0 413 aa6.45□□□□□ -1.38
CUL3-215ENST00000546102 HIC1Q14526 733 aa6.45□□□□□ -1.38
CUL3-215ENST00000546102 SUPT5HO00267 1087 aaKnown RBP6.44□□□□□ -1.38
CUL3-215ENST00000546102 SLC10A3P09131 477 aa6.44□□□□□ -1.38
CUL3-215ENST00000546102 RDH13Q8NBN7 331 aa6.44□□□□□ -1.38
CUL3-215ENST00000546102 PXYLP1Q8TE99 480 aa6.44□□□□□ -1.38
CUL3-215ENST00000546102 TNFRSF10AO00220 468 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 SEMA3EO15041 775 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 LIAT1Q6ZQX7 453 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 TRIM67Q6ZTA4 783 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 SCUBE3Q8IX30 993 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 SPSB2Q99619 263 aa6.43□□□□□ -1.38
CUL3-215ENST00000546102 MYT1Q01538 1121 aa6.42□□□□□ -1.38
CUL3-215ENST00000546102 NEUROD2Q15784 382 aa6.42□□□□□ -1.38
CUL3-215ENST00000546102 ZNF775Q96BV0 537 aaPredicted RBP6.42□□□□□ -1.38
CUL3-215ENST00000546102 CCDC180Q9P1Z9 1646 aa6.41□□□□□ -1.38
CUL3-215ENST00000546102 PUS10Q3MIT2 529 aaKnown RBP6.41□□□□□ -1.38
CUL3-215ENST00000546102 METTL3Q86U44 580 aaKnown RBP6.41□□□□□ -1.38
CUL3-215ENST00000546102 SULF1Q8IWU6 871 aa6.4□□□□□ -1.38
CUL3-215ENST00000546102 ZC3H15Q8WU90 426 aaKnown RBP6.4□□□□□ -1.38
CUL3-215ENST00000546102 EMID1Q96A84 441 aaPredicted RBP6.4□□□□□ -1.38
CUL3-215ENST00000546102 DDX11L8A8MPP1 907 aa6.39□□□□□ -1.39
CUL3-215ENST00000546102 GNPATO15228 680 aa6.39□□□□□ -1.39
CUL3-215ENST00000546102 ZBTB24O43167 697 aaPredicted RBP6.39□□□□□ -1.39
CUL3-215ENST00000546102 GDF9O60383 454 aa6.39□□□□□ -1.39
CUL3-215ENST00000546102 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
CUL3-215ENST00000546102 FMNL1O95466 1100 aaPredicted RBP6.39□□□□□ -1.39
CUL3-215ENST00000546102 FOXC1Q12948 553 aa6.39□□□□□ -1.39
CUL3-215ENST00000546102 SLC24A3Q9HC58 644 aa6.39□□□□□ -1.39
CUL3-215ENST00000546102 RPIAP49247 311 aa6.38□□□□□ -1.39
CUL3-215ENST00000546102 GRIPAP1Q4V328 841 aa6.38□□□□□ -1.39
CUL3-215ENST00000546102 ATP6V1AP38606 617 aa6.37□□□□□ -1.39
CUL3-215ENST00000546102 RBM26Q5T8P6 1007 aaKnown RBP6.37□□□□□ -1.39
CUL3-215ENST00000546102 CYP4X1Q8N118 509 aa6.37□□□□□ -1.39
CUL3-215ENST00000546102 FUT2Q10981 343 aa6.36□□□□□ -1.39
CUL3-215ENST00000546102 PLA2G2CQ5R387 149 aa6.36□□□□□ -1.39
CUL3-215ENST00000546102 FCF1Q9Y324 198 aaKnown RBP6.36□□□□□ -1.39
CUL3-215ENST00000546102 TESPA1A2RU30 521 aaPredicted RBP6.35□□□□□ -1.39
CUL3-215ENST00000546102 MORN1Q5T089 497 aa6.35□□□□□ -1.39
CUL3-215ENST00000546102 AAASQ9NRG9 546 aa6.34□□□□□ -1.39
CUL3-215ENST00000546102 TTC24A2A3L6 582 aaPredicted RBP6.33□□□□□ -1.4
CUL3-215ENST00000546102 ST8SIA5O15466 376 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms