RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-221	ENST00000545367	LRP6	O75581	1613 aa		13.86	□□□□□ -0.19
NPIPB4-221	ENST00000545367	SHPRH	Q149N8	1683 aa		13.85	□□□□□ -0.19
NPIPB4-221	ENST00000545367	LTK	P29376	864 aa		13.85	□□□□□ -0.19
NPIPB4-221	ENST00000545367	SRCAP	Q6ZRS2	3230 aa		13.85	□□□□□ -0.19
NPIPB4-221	ENST00000545367	ADGRB3	O60242	1522 aa		13.85	□□□□□ -0.19
NPIPB4-221	ENST00000545367	DUOX2	Q9NRD8	1548 aa		13.85	□□□□□ -0.19
NPIPB4-221	ENST00000545367	SLC24A1	O60721	1099 aa		13.84	□□□□□ -0.19
NPIPB4-221	ENST00000545367	TET3	O43151	1660 aa		13.82	□□□□□ -0.2
NPIPB4-221	ENST00000545367	GCC2	Q8IWJ2	1684 aa		13.82	□□□□□ -0.2
NPIPB4-221	ENST00000545367	TXNDC2	Q86VQ3	553 aa		13.82	□□□□□ -0.2
NPIPB4-221	ENST00000545367	CHD2	O14647	1828 aa	Known RBP	13.81	□□□□□ -0.2
NPIPB4-221	ENST00000545367	TMEM2	Q9UHN6	1383 aa		13.81	□□□□□ -0.2
NPIPB4-221	ENST00000545367	RBM33	Q96EV2	1170 aa	Known RBP	13.8	□□□□□ -0.2
NPIPB4-221	ENST00000545367	JCAD	Q9P266	1359 aa		13.8	□□□□□ -0.2
NPIPB4-221	ENST00000545367	ARHGAP31	Q2M1Z3	1444 aa		13.8	□□□□□ -0.2
NPIPB4-221	ENST00000545367	EID1	Q9Y6B2	187 aa		13.79	□□□□□ -0.2
NPIPB4-221	ENST00000545367	MSH6	P52701	1360 aa		13.79	□□□□□ -0.2
NPIPB4-221	ENST00000545367	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.79	□□□□□ -0.2
NPIPB4-221	ENST00000545367	TSPY4	P0CV99	314 aa		13.78	□□□□□ -0.2
NPIPB4-221	ENST00000545367	TSPY10	P0CW01	314 aa		13.78	□□□□□ -0.2
NPIPB4-221	ENST00000545367	RSPH4A	Q5TD94	716 aa		13.78	□□□□□ -0.2
NPIPB4-221	ENST00000545367	ABCB7	O75027	752 aa		13.77	□□□□□ -0.21
NPIPB4-221	ENST00000545367	ERBIN	Q96RT1	1412 aa		13.77	□□□□□ -0.21
NPIPB4-221	ENST00000545367	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.76	□□□□□ -0.21
NPIPB4-221	ENST00000545367	TRIM52	Q96A61	297 aa		13.76	□□□□□ -0.21
NPIPB4-221	ENST00000545367	KIF15	Q9NS87	1388 aa		13.75	□□□□□ -0.21
NPIPB4-221	ENST00000545367	POLA2	Q14181	598 aa		13.75	□□□□□ -0.21
NPIPB4-221	ENST00000545367	DIP2A	Q14689	1571 aa		13.75	□□□□□ -0.21
NPIPB4-221	ENST00000545367	PROSER2	Q86WR7	435 aa	Predicted RBP	13.74	□□□□□ -0.21
NPIPB4-221	ENST00000545367	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
NPIPB4-221	ENST00000545367	SLC26A8	Q96RN1	970 aa		13.74	□□□□□ -0.21
NPIPB4-221	ENST00000545367	FGD6	Q6ZV73	1430 aa		13.73	□□□□□ -0.21
NPIPB4-221	ENST00000545367	KCNA6	P17658	529 aa		13.73	□□□□□ -0.21
NPIPB4-221	ENST00000545367	MEX3C	Q5U5Q3	659 aa	Known RBP	13.73	□□□□□ -0.21
NPIPB4-221	ENST00000545367	STAG3	Q9UJ98	1225 aa		13.73	□□□□□ -0.21
NPIPB4-221	ENST00000545367	LMTK2	Q8IWU2	1503 aa		13.73	□□□□□ -0.21
NPIPB4-221	ENST00000545367	PTPN23	Q9H3S7	1636 aa		13.72	□□□□□ -0.21
NPIPB4-221	ENST00000545367	MYOM3	Q5VTT5	1437 aa		13.72	□□□□□ -0.21
NPIPB4-221	ENST00000545367	NHSL1	Q5SYE7	1610 aa		13.71	□□□□□ -0.22
NPIPB4-221	ENST00000545367	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.7	□□□□□ -0.22
NPIPB4-221	ENST00000545367	KANK1	Q14678	1352 aa		13.69	□□□□□ -0.22
NPIPB4-221	ENST00000545367	TMEM131L	A2VDJ0	1609 aa		13.68	□□□□□ -0.22
NPIPB4-221	ENST00000545367	SPATA31A6	Q5VVP1	1343 aa		13.68	□□□□□ -0.22
NPIPB4-221	ENST00000545367	RGS12	O14924	1447 aa		13.68	□□□□□ -0.22
NPIPB4-221	ENST00000545367	ZNF772	Q68DY9	489 aa	Predicted RBP	13.68	□□□□□ -0.22
NPIPB4-221	ENST00000545367	SLAIN2	Q9P270	581 aa		13.68	□□□□□ -0.22
NPIPB4-221	ENST00000545367	ZFYVE9	O95405	1425 aa		13.67	□□□□□ -0.22
NPIPB4-221	ENST00000545367	NOS1	P29475	1434 aa		13.67	□□□□□ -0.22
NPIPB4-221	ENST00000545367	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.67	□□□□□ -0.22
NPIPB4-221	ENST00000545367	EP400	Q96L91	3159 aa		13.67	□□□□□ -0.22
NPIPB4-221	ENST00000545367	ASXL1	Q8IXJ9	1541 aa		13.66	□□□□□ -0.22
NPIPB4-221	ENST00000545367	BCAN	Q96GW7	911 aa		13.66	□□□□□ -0.22
NPIPB4-221	ENST00000545367	ABCC5	O15440	1437 aa		13.65	□□□□□ -0.22
NPIPB4-221	ENST00000545367	PLEKHG1	Q9ULL1	1385 aa		13.65	□□□□□ -0.22
NPIPB4-221	ENST00000545367	DAPK1	P53355	1430 aa		13.64	□□□□□ -0.23
NPIPB4-221	ENST00000545367	IDI1	Q13907	227 aa		13.64	□□□□□ -0.23
NPIPB4-221	ENST00000545367	XRN1	Q8IZH2	1706 aa	Known RBP	13.64	□□□□□ -0.23
NPIPB4-221	ENST00000545367	VPS8	Q8N3P4	1428 aa		13.64	□□□□□ -0.23
NPIPB4-221	ENST00000545367	C14orf37	Q86TY3	774 aa		13.63	□□□□□ -0.23
NPIPB4-221	ENST00000545367	RRP7BP	Q9NSQ0	103 aa		13.63	□□□□□ -0.23
NPIPB4-221	ENST00000545367	RIMS2	Q9UQ26	1411 aa		13.63	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NALCN	Q8IZF0	1738 aa		13.62	□□□□□ -0.23
NPIPB4-221	ENST00000545367	RXRB	P28702	533 aa		13.62	□□□□□ -0.23
NPIPB4-221	ENST00000545367	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.62	□□□□□ -0.23
NPIPB4-221	ENST00000545367	TRPM2	O94759	1503 aa		13.62	□□□□□ -0.23
NPIPB4-221	ENST00000545367	UNC13B	O14795	1591 aa		13.62	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.61	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NUTM2E	B1AL46	878 aa	Predicted RBP	13.61	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.61	□□□□□ -0.23
NPIPB4-221	ENST00000545367	AFF2	P51816	1311 aa		13.61	□□□□□ -0.23
NPIPB4-221	ENST00000545367	RPRD2	Q5VT52	1461 aa	Known RBP	13.61	□□□□□ -0.23
NPIPB4-221	ENST00000545367		E9PCH4	1651 aa		13.6	□□□□□ -0.23
NPIPB4-221	ENST00000545367	PPP1R15A	O75807	674 aa	Predicted RBP	13.6	□□□□□ -0.23
NPIPB4-221	ENST00000545367	ADAMTS13	Q76LX8	1427 aa		13.59	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NCOA3	Q9Y6Q9	1424 aa		13.59	□□□□□ -0.23
NPIPB4-221	ENST00000545367	NRXN3	Q9Y4C0	1643 aa		13.59	□□□□□ -0.23
NPIPB4-221	ENST00000545367	SETBP1	Q9Y6X0	1596 aa		13.58	□□□□□ -0.23
NPIPB4-221	ENST00000545367	DCC	P43146	1447 aa		13.56	□□□□□ -0.24
NPIPB4-221	ENST00000545367	KANK4	Q5T7N3	995 aa	Predicted RBP	13.56	□□□□□ -0.24
NPIPB4-221	ENST00000545367	RTN4	Q9NQC3	1192 aa	Known RBP	13.56	□□□□□ -0.24
NPIPB4-221	ENST00000545367	ANKRD30A	Q9BXX3	1397 aa		13.56	□□□□□ -0.24
NPIPB4-221	ENST00000545367	IQGAP3	Q86VI3	1631 aa		13.55	□□□□□ -0.24
NPIPB4-221	ENST00000545367	ATF3	P18847	181 aa		13.55	□□□□□ -0.24
NPIPB4-221	ENST00000545367	CADPS2	Q86UW7	1296 aa		13.55	□□□□□ -0.24
NPIPB4-221	ENST00000545367	MST1R	Q04912	1400 aa		13.55	□□□□□ -0.24
NPIPB4-221	ENST00000545367	SETD5	Q9C0A6	1442 aa		13.55	□□□□□ -0.24
NPIPB4-221	ENST00000545367	BRINP3	Q76B58	766 aa		13.54	□□□□□ -0.24
NPIPB4-221	ENST00000545367	ADGRL2	O95490	1459 aa		13.54	□□□□□ -0.24
NPIPB4-221	ENST00000545367	MARF1	Q9Y4F3	1742 aa	Known RBP	13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	C8orf37	Q96NL8	207 aa		13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	ATAD2	Q6PL18	1390 aa		13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	PNPLA6	Q8IY17	1366 aa		13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	PTPRU	Q92729	1446 aa		13.53	□□□□□ -0.24
NPIPB4-221	ENST00000545367	SLC52A1	Q9NWF4	448 aa		13.52	□□□□□ -0.25
NPIPB4-221	ENST00000545367	PIK3R4	Q99570	1358 aa		13.52	□□□□□ -0.25
NPIPB4-221	ENST00000545367	LAMC1	P11047	1609 aa		13.52	□□□□□ -0.25
NPIPB4-221	ENST00000545367	SPHKAP	Q2M3C7	1700 aa		13.51	□□□□□ -0.25
NPIPB4-221	ENST00000545367	CHIC2	Q9UKJ5	165 aa		13.51	□□□□□ -0.25
NPIPB4-221	ENST00000545367	C19orf44	Q9H6X5	657 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms