RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 BCANQ96GW7 911 aa14.91□□□□□ -0.02
CHD4-212ENST00000545083 CROCC2H7BZ55 1655 aa14.9□□□□□ -0.02
CHD4-212ENST00000545083 ZFYVE9O95405 1425 aa14.9□□□□□ -0.02
CHD4-212ENST00000545083 DAPK1P53355 1430 aa14.89□□□□□ -0.03
CHD4-212ENST00000545083 FGD6Q6ZV73 1430 aa14.89□□□□□ -0.03
CHD4-212ENST00000545083 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
CHD4-212ENST00000545083 PLEKHG1Q9ULL1 1385 aa14.88□□□□□ -0.03
CHD4-212ENST00000545083 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
CHD4-212ENST00000545083 ZNF772Q68DY9 489 aaPredicted RBP14.88□□□□□ -0.03
CHD4-212ENST00000545083 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
CHD4-212ENST00000545083 SLC52A1Q9NWF4 448 aa14.87□□□□□ -0.03
CHD4-212ENST00000545083 CHIC2Q9UKJ5 165 aa14.87□□□□□ -0.03
CHD4-212ENST00000545083 PTPN23Q9H3S7 1636 aa14.86□□□□□ -0.03
CHD4-212ENST00000545083 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
CHD4-212ENST00000545083 RIMS2Q9UQ26 1411 aa14.85□□□□□ -0.03
CHD4-212ENST00000545083 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
CHD4-212ENST00000545083 NCOA3Q9Y6Q9 1424 aa14.84□□□□□ -0.03
CHD4-212ENST00000545083 ANKRD30AQ9BXX3 1397 aa14.84□□□□□ -0.03
CHD4-212ENST00000545083 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
CHD4-212ENST00000545083 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
CHD4-212ENST00000545083 RXRBP28702 533 aa14.83□□□□□ -0.04
CHD4-212ENST00000545083 C14orf37Q86TY3 774 aa14.83□□□□□ -0.04
CHD4-212ENST00000545083 TBX22Q9Y458 520 aa14.83□□□□□ -0.04
CHD4-212ENST00000545083 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
CHD4-212ENST00000545083 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
CHD4-212ENST00000545083 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
CHD4-212ENST00000545083 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 NUTM2BA6NNL0 878 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 NUTM2EB1AL46 878 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 NUTM2DQ5VT03 806 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 BRINP3Q76B58 766 aa14.81□□□□□ -0.04
CHD4-212ENST00000545083 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
CHD4-212ENST00000545083 NUTM2AQ8IVF1 878 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 C19orf44Q9H6X5 657 aa14.81□□□□□ -0.04
CHD4-212ENST00000545083 CDK12Q9NYV4 1490 aaPredicted RBP14.81□□□□□ -0.04
CHD4-212ENST00000545083 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
CHD4-212ENST00000545083 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
CHD4-212ENST00000545083 RPRD2Q5VT52 1461 aaKnown RBP14.8□□□□□ -0.04
CHD4-212ENST00000545083 GCC2Q8IWJ2 1684 aa14.8□□□□□ -0.04
CHD4-212ENST00000545083 ATF3P18847 181 aa14.79□□□□□ -0.04
CHD4-212ENST00000545083 AFF2P51816 1311 aa14.78□□□□□ -0.04
CHD4-212ENST00000545083 RGS12O14924 1447 aa14.77□□□□□ -0.04
CHD4-212ENST00000545083 PTPRUQ92729 1446 aa14.77□□□□□ -0.04
CHD4-212ENST00000545083 HDGFP51858 240 aaKnown RBP14.77□□□□□ -0.05
CHD4-212ENST00000545083 ADGRL2O95490 1459 aa14.76□□□□□ -0.05
CHD4-212ENST00000545083 PIK3R4Q99570 1358 aa14.75□□□□□ -0.05
CHD4-212ENST00000545083 CHGAP10645 457 aaKnown RBP14.75□□□□□ -0.05
CHD4-212ENST00000545083 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD4-212ENST00000545083 AMOTL2Q9Y2J4 779 aa14.75□□□□□ -0.05
CHD4-212ENST00000545083 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
CHD4-212ENST00000545083 ASXL1Q8IXJ9 1541 aa14.74□□□□□ -0.05
CHD4-212ENST00000545083 ANKRD50Q9ULJ7 1429 aa14.74□□□□□ -0.05
CHD4-212ENST00000545083 DDX17Q92841 729 aaKnown RBP14.72□□□□□ -0.05
CHD4-212ENST00000545083 C8orf37Q96NL8 207 aa14.72□□□□□ -0.05
CHD4-212ENST00000545083 DCCP43146 1447 aa14.72□□□□□ -0.05
CHD4-212ENST00000545083 MST1RQ04912 1400 aa14.72□□□□□ -0.05
CHD4-212ENST00000545083 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
CHD4-212ENST00000545083 QTRT2Q9H974 415 aaKnown RBP14.71□□□□□ -0.05
CHD4-212ENST00000545083 TRPM2O94759 1503 aa14.71□□□□□ -0.06
CHD4-212ENST00000545083 PNPLA6Q8IY17 1366 aa14.7□□□□□ -0.06
CHD4-212ENST00000545083 NHSL1Q5SYE7 1610 aa14.7□□□□□ -0.06
CHD4-212ENST00000545083 LRRC59Q96AG4 307 aaKnown RBP14.69□□□□□ -0.06
CHD4-212ENST00000545083 UNC13BO14795 1591 aa14.68□□□□□ -0.06
CHD4-212ENST00000545083 XRN1Q8IZH2 1706 aaKnown RBP14.68□□□□□ -0.06
CHD4-212ENST00000545083 E9PCH4 1651 aa14.68□□□□□ -0.06
CHD4-212ENST00000545083 APLP2Q06481 763 aa14.67□□□□□ -0.06
CHD4-212ENST00000545083 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
CHD4-212ENST00000545083 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
CHD4-212ENST00000545083 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
CHD4-212ENST00000545083 METP08581 1390 aa14.64□□□□□ -0.07
CHD4-212ENST00000545083 NGLY1Q96IV0 654 aa14.64□□□□□ -0.07
CHD4-212ENST00000545083 ADGRL3Q9HAR2 1447 aa14.63□□□□□ -0.07
CHD4-212ENST00000545083 SETBP1Q9Y6X0 1596 aa14.63□□□□□ -0.07
CHD4-212ENST00000545083 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
CHD4-212ENST00000545083 IQGAP3Q86VI3 1631 aa14.6□□□□□ -0.07
CHD4-212ENST00000545083 USP21Q9UK80 565 aa14.6□□□□□ -0.07
CHD4-212ENST00000545083 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
CHD4-212ENST00000545083 NALCNQ8IZF0 1738 aa14.59□□□□□ -0.07
CHD4-212ENST00000545083 EP400Q96L91 3159 aa14.59□□□□□ -0.07
CHD4-212ENST00000545083 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
CHD4-212ENST00000545083 TRPC5Q9UL62 973 aaPredicted RBP14.58□□□□□ -0.08
CHD4-212ENST00000545083 SOS2Q07890 1332 aaPredicted RBP14.58□□□□□ -0.08
CHD4-212ENST00000545083 NUP155O75694 1391 aa14.58□□□□□ -0.08
CHD4-212ENST00000545083 ATRNO75882 1429 aa14.58□□□□□ -0.08
CHD4-212ENST00000545083 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
CHD4-212ENST00000545083 ORAI2Q96SN7 254 aa14.57□□□□□ -0.08
CHD4-212ENST00000545083 LAMC1P11047 1609 aa14.56□□□□□ -0.08
CHD4-212ENST00000545083 ZNF326Q5BKZ1 582 aaKnown RBP14.55□□□□□ -0.08
CHD4-212ENST00000545083 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
CHD4-212ENST00000545083 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
CHD4-212ENST00000545083 NEXMIFQ5QGS0 1516 aa14.52□□□□□ -0.08
CHD4-212ENST00000545083 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.08
CHD4-212ENST00000545083 MYOM2P54296 1465 aa14.51□□□□□ -0.09
CHD4-212ENST00000545083 BCL9LQ86UU0 1499 aa14.51□□□□□ -0.09
CHD4-212ENST00000545083 SPHKAPQ2M3C7 1700 aa14.5□□□□□ -0.09
CHD4-212ENST00000545083 FOXD1Q16676 465 aa14.5□□□□□ -0.09
CHD4-212ENST00000545083 COL22A1Q8NFW1 1626 aaPredicted RBP14.5□□□□□ -0.09
CHD4-212ENST00000545083 CCDC125Q86Z20 511 aa14.49□□□□□ -0.09
CHD4-212ENST00000545083 CLTCL1P53675 1640 aa14.48□□□□□ -0.09
CHD4-212ENST00000545083 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms