RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
TNC-213ENST00000544972 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
TNC-213ENST00000544972 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
TNC-213ENST00000544972 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
TNC-213ENST00000544972 RPGRIP1LQ68CZ1 1315 aa15.97■□□□□ 0.15
TNC-213ENST00000544972 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
TNC-213ENST00000544972 MIER1Q8N108 512 aa15.96■□□□□ 0.14
TNC-213ENST00000544972 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.14
TNC-213ENST00000544972 CCDC7Q96M83 1385 aa15.94■□□□□ 0.14
TNC-213ENST00000544972 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
TNC-213ENST00000544972 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
TNC-213ENST00000544972 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
TNC-213ENST00000544972 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
TNC-213ENST00000544972 CFAP70Q5T0N1 1121 aa15.91■□□□□ 0.14
TNC-213ENST00000544972 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
TNC-213ENST00000544972 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
TNC-213ENST00000544972 C3P01024 1663 aa15.9■□□□□ 0.14
TNC-213ENST00000544972 A2ML1A8K2U0 1454 aa15.89■□□□□ 0.14
TNC-213ENST00000544972 VGFO15240 615 aaPredicted RBP15.89■□□□□ 0.13
TNC-213ENST00000544972 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
TNC-213ENST00000544972 C14orf93Q9H972 538 aaKnown RBP15.88■□□□□ 0.13
TNC-213ENST00000544972 TNRQ92752 1358 aa15.88■□□□□ 0.13
TNC-213ENST00000544972 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
TNC-213ENST00000544972 SETBP1Q9Y6X0 1596 aa15.87■□□□□ 0.13
TNC-213ENST00000544972 CEBPAP49715 358 aaPredicted RBP15.87■□□□□ 0.13
TNC-213ENST00000544972 TESK2Q96S53 571 aa15.87■□□□□ 0.13
TNC-213ENST00000544972 ADGRB1O14514 1584 aa15.85■□□□□ 0.13
TNC-213ENST00000544972 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
TNC-213ENST00000544972 KDM5AP29375 1690 aaKnown RBP15.84■□□□□ 0.13
TNC-213ENST00000544972 UBR1Q8IWV7 1749 aa15.83■□□□□ 0.12
TNC-213ENST00000544972 ADAMTSL3P82987 1691 aa15.82■□□□□ 0.12
TNC-213ENST00000544972 RIMS2Q9UQ26 1411 aa15.81■□□□□ 0.12
TNC-213ENST00000544972 NLRP1Q9C000 1473 aa15.81■□□□□ 0.12
TNC-213ENST00000544972 DISP3Q9P2K9 1392 aa15.81■□□□□ 0.12
TNC-213ENST00000544972 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
TNC-213ENST00000544972 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
TNC-213ENST00000544972 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
TNC-213ENST00000544972 ASXL1Q8IXJ9 1541 aa15.79■□□□□ 0.12
TNC-213ENST00000544972 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
TNC-213ENST00000544972 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
TNC-213ENST00000544972 ALKQ9UM73 1620 aa15.77■□□□□ 0.12
TNC-213ENST00000544972 TMEM2Q9UHN6 1383 aa15.77■□□□□ 0.11
TNC-213ENST00000544972 TMF1P82094 1093 aa15.76■□□□□ 0.11
TNC-213ENST00000544972 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
TNC-213ENST00000544972 ANP32CO43423 234 aa15.75■□□□□ 0.11
TNC-213ENST00000544972 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
TNC-213ENST00000544972 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
TNC-213ENST00000544972 SETD1AO15047 1707 aaKnown RBP15.75■□□□□ 0.11
TNC-213ENST00000544972 NRXN3Q9Y4C0 1643 aa15.75■□□□□ 0.11
TNC-213ENST00000544972 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
TNC-213ENST00000544972 ARHGEF28Q8N1W1 1705 aaKnown RBP15.74■□□□□ 0.11
TNC-213ENST00000544972 PTPRMP28827 1452 aa15.74■□□□□ 0.11
TNC-213ENST00000544972 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
TNC-213ENST00000544972 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
TNC-213ENST00000544972 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
TNC-213ENST00000544972 HDGFP51858 240 aaKnown RBP15.71■□□□□ 0.11
TNC-213ENST00000544972 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.11
TNC-213ENST00000544972 SLIT1O75093 1534 aa15.71■□□□□ 0.1
TNC-213ENST00000544972 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
TNC-213ENST00000544972 LTKP29376 864 aa15.7■□□□□ 0.1
TNC-213ENST00000544972 SLC24A1O60721 1099 aa15.68■□□□□ 0.1
TNC-213ENST00000544972 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
TNC-213ENST00000544972 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
TNC-213ENST00000544972 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
TNC-213ENST00000544972 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
TNC-213ENST00000544972 STK26Q9P289 416 aa15.67■□□□□ 0.1
TNC-213ENST00000544972 MYOM1P52179 1685 aa15.67■□□□□ 0.1
TNC-213ENST00000544972 METP08581 1390 aa15.66■□□□□ 0.1
TNC-213ENST00000544972 PLEKHG1Q9ULL1 1385 aa15.66■□□□□ 0.1
TNC-213ENST00000544972 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
TNC-213ENST00000544972 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
TNC-213ENST00000544972 ADAMTS13Q76LX8 1427 aa15.66■□□□□ 0.1
TNC-213ENST00000544972 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
TNC-213ENST00000544972 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
TNC-213ENST00000544972 ZNF142P52746 1687 aaPredicted RBP15.66■□□□□ 0.1
TNC-213ENST00000544972 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
TNC-213ENST00000544972 DLC1Q96QB1 1528 aa15.64■□□□□ 0.09
TNC-213ENST00000544972 MED14O60244 1454 aa15.64■□□□□ 0.09
TNC-213ENST00000544972 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
TNC-213ENST00000544972 PANK3Q9H999 370 aa15.63■□□□□ 0.09
TNC-213ENST00000544972 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
TNC-213ENST00000544972 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
TNC-213ENST00000544972 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
TNC-213ENST00000544972 KNDC1Q76NI1 1749 aa15.61■□□□□ 0.09
TNC-213ENST00000544972 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
TNC-213ENST00000544972 BCANQ96GW7 911 aa15.6■□□□□ 0.09
TNC-213ENST00000544972 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
TNC-213ENST00000544972 TECPR2O15040 1411 aa15.6■□□□□ 0.09
TNC-213ENST00000544972 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
TNC-213ENST00000544972 POGKQ9P215 609 aa15.59■□□□□ 0.09
TNC-213ENST00000544972 EVC2Q86UK5 1308 aa15.58■□□□□ 0.09
TNC-213ENST00000544972 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
TNC-213ENST00000544972 CCDC184Q52MB2 194 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 WAPLQ7Z5K2 1190 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 CPS1P31327 1500 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 SIRT1Q96EB6 747 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 TBX22Q9Y458 520 aa15.57■□□□□ 0.08
TNC-213ENST00000544972 MINK1Q8N4C8 1332 aaPredicted RBP15.56■□□□□ 0.08
TNC-213ENST00000544972 CNGB1Q14028 1251 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms