RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 EPS15P42566 896 aa24.48■■□□□ 1.51
BPTF-208ENST00000544778 IPO9Q96P70 1041 aaKnown RBP24.48■■□□□ 1.51
BPTF-208ENST00000544778 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
BPTF-208ENST00000544778 RUFY1Q96T51 708 aa24.47■■□□□ 1.51
BPTF-208ENST00000544778 HSP90AB2PQ58FF8 381 aa24.47■■□□□ 1.51
BPTF-208ENST00000544778 PAF1Q8N7H5 531 aa24.46■■□□□ 1.51
BPTF-208ENST00000544778 IFIT2P09913 472 aaKnown RBP24.45■■□□□ 1.51
BPTF-208ENST00000544778 MTMR7Q9Y216 660 aa24.45■■□□□ 1.51
BPTF-208ENST00000544778 TNIKQ9UKE5 1360 aa24.45■■□□□ 1.5
BPTF-208ENST00000544778 COG3Q96JB2 828 aa24.45■■□□□ 1.5
BPTF-208ENST00000544778 MPHOSPH9Q99550 1183 aa24.45■■□□□ 1.5
BPTF-208ENST00000544778 TMEM132AQ24JP5 1023 aa24.45■■□□□ 1.5
BPTF-208ENST00000544778 BCL11BQ9C0K0 894 aaPredicted RBP24.45■■□□□ 1.5
BPTF-208ENST00000544778 RUFY2Q8WXA3 655 aa24.45■■□□□ 1.5
BPTF-208ENST00000544778 BICD2Q8TD16 824 aa24.44■■□□□ 1.5
BPTF-208ENST00000544778 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
BPTF-208ENST00000544778 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
BPTF-208ENST00000544778 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.51e-6■■□□□ 13.1
BPTF-208ENST00000544778 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
BPTF-208ENST00000544778 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
BPTF-208ENST00000544778 ZKSCAN1P17029 563 aaPredicted RBP24.41■■□□□ 1.5
BPTF-208ENST00000544778 IKQ13123 557 aaPredicted RBP24.41■■□□□ 1.5
BPTF-208ENST00000544778 AK7Q96M32 723 aa24.41■■□□□ 1.5
BPTF-208ENST00000544778 TEX35Q5T0J7 233 aa24.41■■□□□ 1.5
BPTF-208ENST00000544778 KDM4AO75164 1064 aa24.4■■□□□ 1.5
BPTF-208ENST00000544778 CUX2O14529 1486 aa24.39■■□□□ 1.5
BPTF-208ENST00000544778 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.5
BPTF-208ENST00000544778 SLC4A3P48751 1232 aa24.38■■□□□ 1.49
BPTF-208ENST00000544778 WWC2Q6AWC2 1192 aa24.38■■□□□ 1.49
BPTF-208ENST00000544778 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
BPTF-208ENST00000544778 CCAR1Q8IX12 1150 aaKnown RBP24.37■■□□□ 1.49
BPTF-208ENST00000544778 PSME1Q06323 249 aa24.37■■□□□ 1.49
BPTF-208ENST00000544778 SKIDA1Q1XH10 827 aa24.37■■□□□ 1.49
BPTF-208ENST00000544778 CDR1P51861 262 aa24.35■■□□□ 1.49
BPTF-208ENST00000544778 G3BP1Q13283 466 aaKnown RBP eCLIP24.34■■□□□ 1.495e-6■■□□□ 11.9
BPTF-208ENST00000544778 SKOR2Q2VWA4 1001 aaPredicted RBP24.34■■□□□ 1.49
BPTF-208ENST00000544778 SASS6Q6UVJ0 657 aa24.34■■□□□ 1.49
BPTF-208ENST00000544778 PLIN1O60240 522 aa24.34■■□□□ 1.49
BPTF-208ENST00000544778 SAFBQ15424 915 aaKnown RBP eCLIP24.34■■□□□ 1.49
BPTF-208ENST00000544778 DDX58O95786 925 aaKnown RBP24.33■■□□□ 1.49
BPTF-208ENST00000544778 VPS37CA5D8V6 355 aaPredicted RBP24.32■■□□□ 1.48
BPTF-208ENST00000544778 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
BPTF-208ENST00000544778 OFD1O75665 1012 aa24.32■■□□□ 1.48
BPTF-208ENST00000544778 MAP7D2Q96T17 732 aa24.32■■□□□ 1.48
BPTF-208ENST00000544778 TTLL5Q6EMB2 1281 aa24.31■■□□□ 1.48
BPTF-208ENST00000544778 PPP1R1BQ9UD71 204 aaPredicted RBP24.31■■□□□ 1.48
BPTF-208ENST00000544778 TIMELESSQ9UNS1 1208 aa24.3■■□□□ 1.48
BPTF-208ENST00000544778 PDILTQ8N807 584 aa24.3■■□□□ 1.48
BPTF-208ENST00000544778 ZKSCAN2Q63HK3 967 aa24.29■■□□□ 1.48
BPTF-208ENST00000544778 CAGE1Q8TC20 777 aa24.29■■□□□ 1.48
BPTF-208ENST00000544778 NEUROD6Q96NK8 337 aa24.29■■□□□ 1.48
BPTF-208ENST00000544778 BRMS1Q9HCU9 246 aa24.28■■□□□ 1.48
BPTF-208ENST00000544778 WASHC4Q2M389 1173 aa24.28■■□□□ 1.48
BPTF-208ENST00000544778 CCDC173Q0VFZ6 552 aa24.28■■□□□ 1.48
BPTF-208ENST00000544778 REC8O95072 547 aa24.28■■□□□ 1.48
BPTF-208ENST00000544778 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
BPTF-208ENST00000544778 CENPQQ7L2Z9 268 aaPredicted RBP24.26■■□□□ 1.47
BPTF-208ENST00000544778 AIMP1Q12904 312 aaKnown RBP24.26■■□□□ 1.47
BPTF-208ENST00000544778 SMC3Q9UQE7 1217 aa24.26■■□□□ 1.47
BPTF-208ENST00000544778 PANK3Q9H999 370 aa24.25■■□□□ 1.47
BPTF-208ENST00000544778 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
BPTF-208ENST00000544778 CGNL1Q0VF96 1302 aa24.25■■□□□ 1.47
BPTF-208ENST00000544778 RDXP35241 583 aaKnown RBP24.25■■□□□ 1.47
BPTF-208ENST00000544778 OLFM4Q6UX06 510 aa24.25■■□□□ 1.47
BPTF-208ENST00000544778 RALYLQ86SE5 291 aaKnown RBP24.25■■□□□ 1.47
BPTF-208ENST00000544778 FAM161AQ3B820 660 aa24.24■■□□□ 1.47
BPTF-208ENST00000544778 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
BPTF-208ENST00000544778 RIC3Q7Z5B4 369 aa24.24■■□□□ 1.47
BPTF-208ENST00000544778 MNS1Q8NEH6 495 aa24.24■■□□□ 1.47
BPTF-208ENST00000544778 IFT57Q9NWB7 429 aa24.24■■□□□ 1.47
BPTF-208ENST00000544778 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
BPTF-208ENST00000544778 FAM177BA6PVY3 158 aa24.22■■□□□ 1.47
BPTF-208ENST00000544778 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
BPTF-208ENST00000544778 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
BPTF-208ENST00000544778 ACBD3Q9H3P7 528 aa24.21■■□□□ 1.47
BPTF-208ENST00000544778 PHLDB1Q86UU1 1377 aa24.21■■□□□ 1.47
BPTF-208ENST00000544778 FAM13BQ9NYF5 915 aa24.21■■□□□ 1.47
BPTF-208ENST00000544778 PDE3BQ13370 1112 aa24.21■■□□□ 1.47
BPTF-208ENST00000544778 CCDC73Q6ZRK6 1079 aa24.2■■□□□ 1.46
BPTF-208ENST00000544778 CRBNQ96SW2 442 aa24.2■■□□□ 1.46
BPTF-208ENST00000544778 XBP1P17861 261 aa24.19■■□□□ 1.46
BPTF-208ENST00000544778 CDK5RAP3Q96JB5 506 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 RSPH6AQ9H0K4 717 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 MYO6Q9UM54 1294 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 RAB3GAP2Q9H2M9 1393 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 SYCP1Q15431 976 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 HSP90B2PQ58FF3 399 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 NOM1Q5C9Z4 860 aaKnown RBP24.18■■□□□ 1.46
BPTF-208ENST00000544778 VSIG10Q8N0Z9 540 aa24.18■■□□□ 1.46
BPTF-208ENST00000544778 E9PSI1 815 aa24.17■■□□□ 1.46
BPTF-208ENST00000544778 NEFHP12036 1026 aa24.17■■□□□ 1.46
BPTF-208ENST00000544778 ARGLU1Q9NWB6 273 aaPredicted RBP24.17■■□□□ 1.46
BPTF-208ENST00000544778 CCDC191Q8NCU4 936 aa24.16■■□□□ 1.46
BPTF-208ENST00000544778 DCTN1Q14203 1278 aa24.16■■□□□ 1.46
BPTF-208ENST00000544778 TSPYL4Q9UJ04 414 aa24.16■■□□□ 1.46
BPTF-208ENST00000544778 MYBBP1AQ9BQG0 1328 aaKnown RBP24.15■■□□□ 1.46
BPTF-208ENST00000544778 RIPK4P57078 832 aa24.15■■□□□ 1.46
BPTF-208ENST00000544778 PLCD4Q9BRC7 762 aa24.15■■□□□ 1.46
BPTF-208ENST00000544778 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
BPTF-208ENST00000544778 ERC2O15083 957 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms