RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-211	ENST00000544496	TMEM131L	A2VDJ0	1609 aa		32.74	■■■□□ 2.83
PCMT1-211	ENST00000544496	STAG3	Q9UJ98	1225 aa		32.73	■■■□□ 2.83
PCMT1-211	ENST00000544496	ADGRF5	Q8IZF2	1346 aa		32.72	■■■□□ 2.83
PCMT1-211	ENST00000544496	ZFYVE9	O95405	1425 aa		32.71	■■■□□ 2.83
PCMT1-211	ENST00000544496	DDX10	Q13206	875 aa	Known RBP	32.69	■■■□□ 2.82
PCMT1-211	ENST00000544496	NEXMIF	Q5QGS0	1516 aa		32.69	■■■□□ 2.82
PCMT1-211	ENST00000544496	TNR	Q92752	1358 aa		32.69	■■■□□ 2.82
PCMT1-211	ENST00000544496	PIK3C2G	O75747	1445 aa		32.67	■■■□□ 2.82
PCMT1-211	ENST00000544496	FER1L4	A9Z1Z3	1794 aa		32.67	■■■□□ 2.82
PCMT1-211	ENST00000544496	WASHC2A	Q641Q2	1341 aa		32.67	■■■□□ 2.82
PCMT1-211	ENST00000544496	ST20-MTHFS	A0A0A6YYL1	179 aa		32.66	■■■□□ 2.82
PCMT1-211	ENST00000544496	CCDC7	Q96M83	1385 aa		32.65	■■■□□ 2.82
PCMT1-211	ENST00000544496	POLR1A	O95602	1720 aa	Predicted RBP	32.64	■■■□□ 2.82
PCMT1-211	ENST00000544496	SCAF11	Q99590	1463 aa	Known RBP	32.63	■■■□□ 2.81
PCMT1-211	ENST00000544496	C14orf93	Q9H972	538 aa	Known RBP	32.62	■■■□□ 2.81
PCMT1-211	ENST00000544496	A2ML1	A8K2U0	1454 aa		32.61	■■■□□ 2.81
PCMT1-211	ENST00000544496	EIF3A	Q14152	1382 aa	Known RBP	32.61	■■■□□ 2.81
PCMT1-211	ENST00000544496	CFAP70	Q5T0N1	1121 aa		32.61	■■■□□ 2.81
PCMT1-211	ENST00000544496	SETBP1	Q9Y6X0	1596 aa		32.6	■■■□□ 2.81
PCMT1-211	ENST00000544496	KDM5A	P29375	1690 aa	Known RBP	32.59	■■■□□ 2.81
PCMT1-211	ENST00000544496	NLRP1	Q9C000	1473 aa		32.59	■■■□□ 2.81
PCMT1-211	ENST00000544496	MYO5B	Q9ULV0	1848 aa		32.58	■■■□□ 2.81
PCMT1-211	ENST00000544496	KIF7	Q2M1P5	1343 aa		32.58	■■■□□ 2.81
PCMT1-211	ENST00000544496	C11orf95	C9JLR9	678 aa	Predicted RBP	32.57	■■■□□ 2.8
PCMT1-211	ENST00000544496	HDGF	P51858	240 aa	Known RBP	32.57	■■■□□ 2.8
PCMT1-211	ENST00000544496	C3	P01024	1663 aa		32.57	■■■□□ 2.8
PCMT1-211	ENST00000544496	IQGAP1	P46940	1657 aa		32.57	■■■□□ 2.8
PCMT1-211	ENST00000544496	SLC24A1	O60721	1099 aa		32.55	■■■□□ 2.8
PCMT1-211	ENST00000544496	MIER1	Q8N108	512 aa		32.55	■■■□□ 2.8
PCMT1-211	ENST00000544496	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
PCMT1-211	ENST00000544496	CEBPA	P49715	358 aa	Predicted RBP	32.5	■■■□□ 2.79
PCMT1-211	ENST00000544496	RIMS2	Q9UQ26	1411 aa		32.5	■■■□□ 2.79
PCMT1-211	ENST00000544496	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.48	■■■□□ 2.79
PCMT1-211	ENST00000544496	TMF1	P82094	1093 aa		32.47	■■■□□ 2.79
PCMT1-211	ENST00000544496	TESK2	Q96S53	571 aa		32.47	■■■□□ 2.79
PCMT1-211	ENST00000544496	ADAMTSL3	P82987	1691 aa		32.46	■■■□□ 2.79
PCMT1-211	ENST00000544496	ADGRB1	O14514	1584 aa		32.45	■■■□□ 2.79
PCMT1-211	ENST00000544496	UBR1	Q8IWV7	1749 aa		32.43	■■■□□ 2.78
PCMT1-211	ENST00000544496	ANP32C	O43423	234 aa		32.41	■■■□□ 2.78
PCMT1-211	ENST00000544496	CDCA8	Q53HL2	280 aa		32.41	■■■□□ 2.78
PCMT1-211	ENST00000544496	RIMS1	Q86UR5	1692 aa	Known RBP	32.41	■■■□□ 2.78
PCMT1-211	ENST00000544496	TMEM2	Q9UHN6	1383 aa		32.41	■■■□□ 2.78
PCMT1-211	ENST00000544496	POLR3GL	Q9BT43	218 aa		32.37	■■■□□ 2.77
PCMT1-211	ENST00000544496	MYO3A	Q8NEV4	1616 aa		32.36	■■■□□ 2.77
PCMT1-211	ENST00000544496	SBNO2	Q9Y2G9	1366 aa		32.35	■■■□□ 2.77
PCMT1-211	ENST00000544496	TMEM132E	Q6IEE7	984 aa		32.34	■■■□□ 2.77
PCMT1-211	ENST00000544496	ALK	Q9UM73	1620 aa		32.34	■■■□□ 2.77
PCMT1-211	ENST00000544496	PLPPR3	Q6T4P5	718 aa		32.33	■■■□□ 2.77
PCMT1-211	ENST00000544496	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.33	■■■□□ 2.77
PCMT1-211	ENST00000544496	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.33	■■■□□ 2.77
PCMT1-211	ENST00000544496	TRAK1	Q9UPV9	953 aa		32.32	■■■□□ 2.76
PCMT1-211	ENST00000544496	DISP3	Q9P2K9	1392 aa		32.31	■■■□□ 2.76
PCMT1-211	ENST00000544496	EID1	Q9Y6B2	187 aa		32.29	■■■□□ 2.76
PCMT1-211	ENST00000544496	SLIT1	O75093	1534 aa		32.28	■■■□□ 2.76
PCMT1-211	ENST00000544496	ARHGAP23	Q9P227	1491 aa		32.26	■■■□□ 2.75
PCMT1-211	ENST00000544496	ASXL1	Q8IXJ9	1541 aa		32.25	■■■□□ 2.75
PCMT1-211	ENST00000544496	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.24	■■■□□ 2.75
PCMT1-211	ENST00000544496	PLEKHG1	Q9ULL1	1385 aa		32.23	■■■□□ 2.75
PCMT1-211	ENST00000544496	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.23	■■■□□ 2.75
PCMT1-211	ENST00000544496	TXNDC2	Q86VQ3	553 aa		32.22	■■■□□ 2.75
PCMT1-211	ENST00000544496	CCER2	I3L3R5	266 aa		32.22	■■■□□ 2.75
PCMT1-211	ENST00000544496	SETD1B	Q9UPS6	1966 aa	Known RBP	32.2	■■■□□ 2.75
PCMT1-211	ENST00000544496	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.2	■■■□□ 2.74
PCMT1-211	ENST00000544496	BCAN	Q96GW7	911 aa		32.18	■■■□□ 2.74
PCMT1-211	ENST00000544496	NRXN3	Q9Y4C0	1643 aa		32.18	■■■□□ 2.74
PCMT1-211	ENST00000544496	LRPPRC	P42704	1394 aa	Known RBP	32.18	■■■□□ 2.74
PCMT1-211	ENST00000544496	QRICH2	Q9H0J4	1663 aa		32.17	■■■□□ 2.74
PCMT1-211	ENST00000544496	SETD1A	O15047	1707 aa	Known RBP	32.17	■■■□□ 2.74
PCMT1-211	ENST00000544496	PTPRM	P28827	1452 aa		32.17	■■■□□ 2.74
PCMT1-211	ENST00000544496	STK26	Q9P289	416 aa		32.16	■■■□□ 2.74
PCMT1-211	ENST00000544496	DLC1	Q96QB1	1528 aa		32.16	■■■□□ 2.74
PCMT1-211	ENST00000544496	ZNF142	P52746	1687 aa	Predicted RBP	32.16	■■■□□ 2.74
PCMT1-211	ENST00000544496	LTK	P29376	864 aa		32.15	■■■□□ 2.74
PCMT1-211	ENST00000544496	PUS7	Q96PZ0	661 aa	Known RBP	32.15	■■■□□ 2.74
PCMT1-211	ENST00000544496	SENP3	Q9H4L4	574 aa	Predicted RBP	32.15	■■■□□ 2.74
PCMT1-211	ENST00000544496	ABCC11	Q96J66	1382 aa		32.14	■■■□□ 2.74
PCMT1-211	ENST00000544496	POGK	Q9P215	609 aa		32.11	■■■□□ 2.73
PCMT1-211	ENST00000544496	EVC2	Q86UK5	1308 aa		32.11	■■■□□ 2.73
PCMT1-211	ENST00000544496	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.11	■■■□□ 2.73
PCMT1-211	ENST00000544496	SIRT1	Q96EB6	747 aa		32.09	■■■□□ 2.73
PCMT1-211	ENST00000544496	ADAMTS13	Q76LX8	1427 aa		32.09	■■■□□ 2.73
PCMT1-211	ENST00000544496	MET	P08581	1390 aa		32.08	■■■□□ 2.73
PCMT1-211	ENST00000544496	KTN1	Q86UP2	1357 aa	Known RBP	32.07	■■■□□ 2.72
PCMT1-211	ENST00000544496	PRAM1	Q96QH2	718 aa		32.07	■■■□□ 2.72
PCMT1-211	ENST00000544496	MED14	O60244	1454 aa		32.05	■■■□□ 2.72
PCMT1-211	ENST00000544496	PANK3	Q9H999	370 aa		32.05	■■■□□ 2.72
PCMT1-211	ENST00000544496	TBX22	Q9Y458	520 aa		32.05	■■■□□ 2.72
PCMT1-211	ENST00000544496	DIP2A	Q14689	1571 aa		32.05	■■■□□ 2.72
PCMT1-211	ENST00000544496	TECPR2	O15040	1411 aa		32.05	■■■□□ 2.72
PCMT1-211	ENST00000544496	ANKLE2	Q86XL3	938 aa		32.04	■■■□□ 2.72
PCMT1-211	ENST00000544496	FAM135B	Q49AJ0	1406 aa		32.02	■■■□□ 2.72
PCMT1-211	ENST00000544496	KNDC1	Q76NI1	1749 aa		32.02	■■■□□ 2.72
PCMT1-211	ENST00000544496	PER1	O15534	1290 aa	Predicted RBP	32.01	■■■□□ 2.72
PCMT1-211	ENST00000544496	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.97	■■■□□ 2.71
PCMT1-211	ENST00000544496	RALBP1	Q15311	655 aa		31.97	■■■□□ 2.71
PCMT1-211	ENST00000544496	CPS1	P31327	1500 aa		31.97	■■■□□ 2.71
PCMT1-211	ENST00000544496	TULP4	Q9NRJ4	1543 aa		31.97	■■■□□ 2.71
PCMT1-211	ENST00000544496	MYOM1	P52179	1685 aa		31.96	■■■□□ 2.71
PCMT1-211	ENST00000544496	KNSTRN	Q9Y448	316 aa		31.95	■■■□□ 2.71
PCMT1-211	ENST00000544496	SLC26A8	Q96RN1	970 aa		31.94	■■■□□ 2.7

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