RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
LRTOMT-221ENST00000544409 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
LRTOMT-221ENST00000544409 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
LRTOMT-221ENST00000544409 KIF1BO60333 1816 aa16.38■□□□□ 0.21
LRTOMT-221ENST00000544409 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
LRTOMT-221ENST00000544409 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
LRTOMT-221ENST00000544409 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
LRTOMT-221ENST00000544409 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
LRTOMT-221ENST00000544409 INSRP06213 1382 aa16.37■□□□□ 0.21
LRTOMT-221ENST00000544409 ZMYM4Q5VZL5 1548 aa16.37■□□□□ 0.21
LRTOMT-221ENST00000544409 SYNMO15061 1565 aa16.36■□□□□ 0.21
LRTOMT-221ENST00000544409 IL27Q8NEV9 243 aa16.36■□□□□ 0.21
LRTOMT-221ENST00000544409 MYOM2P54296 1465 aa16.36■□□□□ 0.21
LRTOMT-221ENST00000544409 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
LRTOMT-221ENST00000544409 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
LRTOMT-221ENST00000544409 LMTK2Q8IWU2 1503 aa16.35■□□□□ 0.21
LRTOMT-221ENST00000544409 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
LRTOMT-221ENST00000544409 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
LRTOMT-221ENST00000544409 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
LRTOMT-221ENST00000544409 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
LRTOMT-221ENST00000544409 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
LRTOMT-221ENST00000544409 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.21
LRTOMT-221ENST00000544409 NOP58Q9Y2X3 529 aaKnown RBP16.33■□□□□ 0.21
LRTOMT-221ENST00000544409 IFT172Q9UG01 1749 aa16.33■□□□□ 0.2
LRTOMT-221ENST00000544409 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
LRTOMT-221ENST00000544409 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
LRTOMT-221ENST00000544409 POGZQ7Z3K3 1410 aa16.32■□□□□ 0.2
LRTOMT-221ENST00000544409 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
LRTOMT-221ENST00000544409 MROH2AA6NES4 1674 aa16.31■□□□□ 0.2
LRTOMT-221ENST00000544409 MYOM1P52179 1685 aa16.3■□□□□ 0.2
LRTOMT-221ENST00000544409 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
LRTOMT-221ENST00000544409 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
LRTOMT-221ENST00000544409 HECW2Q9P2P5 1572 aa16.29■□□□□ 0.2
LRTOMT-221ENST00000544409 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
LRTOMT-221ENST00000544409 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
LRTOMT-221ENST00000544409 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
LRTOMT-221ENST00000544409 ADGRF5Q8IZF2 1346 aa16.28■□□□□ 0.2
LRTOMT-221ENST00000544409 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
LRTOMT-221ENST00000544409 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
LRTOMT-221ENST00000544409 ADGRB3O60242 1522 aa16.27■□□□□ 0.2
LRTOMT-221ENST00000544409 NRXN1Q9ULB1 1477 aa16.27■□□□□ 0.2
LRTOMT-221ENST00000544409 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.19
LRTOMT-221ENST00000544409 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
LRTOMT-221ENST00000544409 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
LRTOMT-221ENST00000544409 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
LRTOMT-221ENST00000544409 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
LRTOMT-221ENST00000544409 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
LRTOMT-221ENST00000544409 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
LRTOMT-221ENST00000544409 NPATQ14207 1427 aa16.24■□□□□ 0.19
LRTOMT-221ENST00000544409 NOS1P29475 1434 aa16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 SETBP1Q9Y6X0 1596 aa16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 GGT6Q6P531 493 aa16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 CDCA7LQ96GN5 454 aa16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
LRTOMT-221ENST00000544409 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
LRTOMT-221ENST00000544409 PPLO60437 1756 aa16.22■□□□□ 0.19
LRTOMT-221ENST00000544409 NEO1Q92859 1461 aa16.22■□□□□ 0.19
LRTOMT-221ENST00000544409 ABCC3O15438 1527 aa16.21■□□□□ 0.18
LRTOMT-221ENST00000544409 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
LRTOMT-221ENST00000544409 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
LRTOMT-221ENST00000544409 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
LRTOMT-221ENST00000544409 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
LRTOMT-221ENST00000544409 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
LRTOMT-221ENST00000544409 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
LRTOMT-221ENST00000544409 DIP2CQ9Y2E4 1556 aa16.16■□□□□ 0.18
LRTOMT-221ENST00000544409 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
LRTOMT-221ENST00000544409 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
LRTOMT-221ENST00000544409 RAPGEF3O95398 923 aa16.15■□□□□ 0.18
LRTOMT-221ENST00000544409 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
LRTOMT-221ENST00000544409 SIGLEC1Q9BZZ2 1709 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 CARD14Q9BXL6 1004 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
LRTOMT-221ENST00000544409 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
LRTOMT-221ENST00000544409 ZNF521Q96K83 1311 aa16.11■□□□□ 0.17
LRTOMT-221ENST00000544409 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
LRTOMT-221ENST00000544409 IPO9Q96P70 1041 aaKnown RBP16.1■□□□□ 0.17
LRTOMT-221ENST00000544409 ARHGAP31Q2M1Z3 1444 aa16.09■□□□□ 0.17
LRTOMT-221ENST00000544409 PLIN1O60240 522 aa16.09■□□□□ 0.17
LRTOMT-221ENST00000544409 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
LRTOMT-221ENST00000544409 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
LRTOMT-221ENST00000544409 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.17
LRTOMT-221ENST00000544409 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.17
LRTOMT-221ENST00000544409 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.17
LRTOMT-221ENST00000544409 GLI2P10070 1586 aa16.08■□□□□ 0.17
LRTOMT-221ENST00000544409 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
LRTOMT-221ENST00000544409 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
LRTOMT-221ENST00000544409 CRBNQ96SW2 442 aa16.06■□□□□ 0.16
LRTOMT-221ENST00000544409 POLR3AO14802 1390 aaPredicted RBP16.06■□□□□ 0.16
LRTOMT-221ENST00000544409 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
LRTOMT-221ENST00000544409 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
LRTOMT-221ENST00000544409 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
LRTOMT-221ENST00000544409 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
LRTOMT-221ENST00000544409 APAF1O14727 1248 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms