RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 ESPNB1AK53 854 aa23.31■■□□□ 1.32
CCT4-204ENST00000544079 IGHDP01880 384 aa23.31■■□□□ 1.32
CCT4-204ENST00000544079 TBC1D2Q9BYX2 928 aa23.31■■□□□ 1.32
CCT4-204ENST00000544079 ABCC2Q92887 1545 aa23.31■■□□□ 1.32
CCT4-204ENST00000544079 EIF2AK4Q9P2K8 1649 aaKnown RBP23.31■■□□□ 1.32
CCT4-204ENST00000544079 PANK2Q9BZ23 570 aa23.31■■□□□ 1.32
CCT4-204ENST00000544079 TESK2Q96S53 571 aa23.3■■□□□ 1.32
CCT4-204ENST00000544079 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
CCT4-204ENST00000544079 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
CCT4-204ENST00000544079 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
CCT4-204ENST00000544079 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
CCT4-204ENST00000544079 PDCL3Q9H2J4 239 aa23.29■■□□□ 1.32
CCT4-204ENST00000544079 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
CCT4-204ENST00000544079 CHMP5Q9NZZ3 219 aa23.29■■□□□ 1.32
CCT4-204ENST00000544079 PIK3C2GO75747 1445 aa23.28■■□□□ 1.32
CCT4-204ENST00000544079 KIAA0556O60303 1618 aa23.28■■□□□ 1.32
CCT4-204ENST00000544079 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
CCT4-204ENST00000544079 TRAK2O60296 914 aa23.27■■□□□ 1.32
CCT4-204ENST00000544079 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 GRPEL1Q9HAV7 217 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
CCT4-204ENST00000544079 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 DDX11L8A8MPP1 907 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 TMF1P82094 1093 aa23.26■■□□□ 1.31
CCT4-204ENST00000544079 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
CCT4-204ENST00000544079 NUP160Q12769 1436 aa23.25■■□□□ 1.31
CCT4-204ENST00000544079 E9PSI1 815 aa23.24■■□□□ 1.31
CCT4-204ENST00000544079 PMFBP1Q8TBY8 1022 aa23.23■■□□□ 1.31
CCT4-204ENST00000544079 CDC42BPAQ5VT25 1732 aa23.23■■□□□ 1.31
CCT4-204ENST00000544079 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
CCT4-204ENST00000544079 SCAPERQ9BY12 1400 aa23.21■■□□□ 1.31
CCT4-204ENST00000544079 DISP1Q96F81 1524 aa23.2■■□□□ 1.3
CCT4-204ENST00000544079 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.3
CCT4-204ENST00000544079 CALD1Q05682 793 aaKnown RBP23.2■■□□□ 1.3
CCT4-204ENST00000544079 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
CCT4-204ENST00000544079 WDR7Q9Y4E6 1490 aa23.19■■□□□ 1.3
CCT4-204ENST00000544079 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
CCT4-204ENST00000544079 CCDC141Q6ZP82 1450 aa23.19■■□□□ 1.3
CCT4-204ENST00000544079 BCAR3O75815 825 aa23.18■■□□□ 1.3
CCT4-204ENST00000544079 TERF1P54274 439 aa23.18■■□□□ 1.3
CCT4-204ENST00000544079 TRIM44Q96DX7 344 aaPredicted RBP23.18■■□□□ 1.3
CCT4-204ENST00000544079 RNF17Q9BXT8 1623 aaKnown RBP23.18■■□□□ 1.3
CCT4-204ENST00000544079 SYNMO15061 1565 aa23.17■■□□□ 1.3
CCT4-204ENST00000544079 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
CCT4-204ENST00000544079 ERBB4Q15303 1308 aa23.17■■□□□ 1.3
CCT4-204ENST00000544079 A2MP01023 1474 aa23.17■■□□□ 1.3
CCT4-204ENST00000544079 NBPF1Q3BBV0 1214 aa23.16■■□□□ 1.3
CCT4-204ENST00000544079 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
CCT4-204ENST00000544079 FAM135AQ9P2D6 1515 aa23.16■■□□□ 1.3
CCT4-204ENST00000544079 PTMSP20962 102 aa23.16■■□□□ 1.3
CCT4-204ENST00000544079 ASXL1Q8IXJ9 1541 aa23.15■■□□□ 1.3
CCT4-204ENST00000544079 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
CCT4-204ENST00000544079 ARXQ96QS3 562 aa23.15■■□□□ 1.3
CCT4-204ENST00000544079 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
CCT4-204ENST00000544079 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.3
CCT4-204ENST00000544079 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
CCT4-204ENST00000544079 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
CCT4-204ENST00000544079 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
CCT4-204ENST00000544079 CHD1O14646 1710 aa23.12■■□□□ 1.29
CCT4-204ENST00000544079 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
CCT4-204ENST00000544079 SKOR2Q2VWA4 1001 aaPredicted RBP23.11■■□□□ 1.29
CCT4-204ENST00000544079 MAP7D2Q96T17 732 aa23.11■■□□□ 1.29
CCT4-204ENST00000544079 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
CCT4-204ENST00000544079 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
CCT4-204ENST00000544079 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.29
CCT4-204ENST00000544079 DDIT3P35638 169 aa23.08■■□□□ 1.29
CCT4-204ENST00000544079 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.29
CCT4-204ENST00000544079 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
CCT4-204ENST00000544079 COG6Q9Y2V7 657 aa23.07■■□□□ 1.28
CCT4-204ENST00000544079 CCDC173Q0VFZ6 552 aa23.07■■□□□ 1.28
CCT4-204ENST00000544079 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
CCT4-204ENST00000544079 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
CCT4-204ENST00000544079 PPP1R9BQ96SB3 815 aa23.06■■□□□ 1.28
CCT4-204ENST00000544079 CANXP27824 592 aaKnown RBP23.06■■□□□ 1.28
CCT4-204ENST00000544079 RWDD1Q9H446 243 aaPredicted RBP23.06■■□□□ 1.28
CCT4-204ENST00000544079 APAF1O14727 1248 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 OFD1O75665 1012 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 UNC13BO14795 1591 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 KIAA1211Q6ZU35 1233 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
CCT4-204ENST00000544079 PLA2R1Q13018 1463 aa23.04■■□□□ 1.28
CCT4-204ENST00000544079 HSCBQ8IWL3 235 aa23.04■■□□□ 1.28
CCT4-204ENST00000544079 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.03■■□□□ 1.28
CCT4-204ENST00000544079 PODXL2Q9NZ53 605 aa23.03■■□□□ 1.28
CCT4-204ENST00000544079 ATP10AO60312 1499 aa23.03■■□□□ 1.28
CCT4-204ENST00000544079 ZSCAN30Q86W11 494 aa23.02■■□□□ 1.28
CCT4-204ENST00000544079 SNX21Q969T3 373 aa23.02■■□□□ 1.28
CCT4-204ENST00000544079 GBP4Q96PP9 640 aa23.02■■□□□ 1.28
CCT4-204ENST00000544079 PRDM4Q9UKN5 801 aa23.01■■□□□ 1.27
CCT4-204ENST00000544079 IBTKQ9P2D0 1353 aaPredicted RBP23.01■■□□□ 1.27
CCT4-204ENST00000544079 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
CCT4-204ENST00000544079 PCDHB15Q9Y5E8 787 aa23.01■■□□□ 1.27
CCT4-204ENST00000544079 SMC5Q8IY18 1101 aa22.99■■□□□ 1.27
CCT4-204ENST00000544079 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
CCT4-204ENST00000544079 SPRYD3Q8NCJ5 442 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms