RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	ASXL1	Q8IXJ9	1541 aa		10.7	□□□□□ -0.7
GTF2H3-212	ENST00000543341	XRN1	Q8IZH2	1706 aa	Known RBP	10.7	□□□□□ -0.7
GTF2H3-212	ENST00000543341	NWD1	Q149M9	1564 aa		10.69	□□□□□ -0.7
GTF2H3-212	ENST00000543341	CFAP65	Q6ZU64	1925 aa	Known RBP	10.69	□□□□□ -0.7
GTF2H3-212	ENST00000543341	PIK3C2G	O75747	1445 aa		10.69	□□□□□ -0.7
GTF2H3-212	ENST00000543341	RALGAPB	Q86X10	1494 aa		10.69	□□□□□ -0.7
GTF2H3-212	ENST00000543341	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.69	□□□□□ -0.7
GTF2H3-212	ENST00000543341	PKD2	Q13563	968 aa		10.68	□□□□□ -0.7
GTF2H3-212	ENST00000543341	GPRASP1	Q5JY77	1395 aa		10.67	□□□□□ -0.7
GTF2H3-212	ENST00000543341	CCDC144A	A2RUR9	1427 aa		10.67	□□□□□ -0.7
GTF2H3-212	ENST00000543341	LMTK3	Q96Q04	1460 aa		10.66	□□□□□ -0.7
GTF2H3-212	ENST00000543341	CHD2	O14647	1828 aa	Known RBP	10.66	□□□□□ -0.7
GTF2H3-212	ENST00000543341	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.65	□□□□□ -0.7
GTF2H3-212	ENST00000543341	CPS1	P31327	1500 aa		10.65	□□□□□ -0.71
GTF2H3-212	ENST00000543341	TNR	Q92752	1358 aa		10.64	□□□□□ -0.71
GTF2H3-212	ENST00000543341	WASHC2C	Q9Y4E1	1318 aa		10.64	□□□□□ -0.71
GTF2H3-212	ENST00000543341	DLC1	Q96QB1	1528 aa		10.64	□□□□□ -0.71
GTF2H3-212	ENST00000543341	STAC3	Q96MF2	364 aa		10.64	□□□□□ -0.71
GTF2H3-212	ENST00000543341	ALK	Q9UM73	1620 aa		10.63	□□□□□ -0.71
GTF2H3-212	ENST00000543341	KDM4F	A0A1W2PPD8	638 aa		10.63	□□□□□ -0.71
GTF2H3-212	ENST00000543341	SLC52A1	Q9NWF4	448 aa		10.63	□□□□□ -0.71
GTF2H3-212	ENST00000543341	ADGRB2	O60241	1585 aa		10.63	□□□□□ -0.71
GTF2H3-212	ENST00000543341	STRCP1	A6NGW2	1772 aa		10.62	□□□□□ -0.71
GTF2H3-212	ENST00000543341	RPGRIP1L	Q68CZ1	1315 aa		10.62	□□□□□ -0.71
GTF2H3-212	ENST00000543341	XIRP1	Q702N8	1843 aa	Known RBP	10.61	□□□□□ -0.71
GTF2H3-212	ENST00000543341	TECPR2	O15040	1411 aa		10.6	□□□□□ -0.71
GTF2H3-212	ENST00000543341	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.6	□□□□□ -0.71
GTF2H3-212	ENST00000543341	GGT6	Q6P531	493 aa		10.59	□□□□□ -0.71
GTF2H3-212	ENST00000543341	RTN4	Q9NQC3	1192 aa	Known RBP	10.59	□□□□□ -0.71
GTF2H3-212	ENST00000543341	MYOM1	P52179	1685 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	TOPAZ1	Q8N9V7	1692 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	FOXD1	Q16676	465 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	TMEM2	Q9UHN6	1383 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	QRICH2	Q9H0J4	1663 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	ADAMTS13	Q76LX8	1427 aa		10.58	□□□□□ -0.72
GTF2H3-212	ENST00000543341	PLEKHG1	Q9ULL1	1385 aa		10.57	□□□□□ -0.72
GTF2H3-212	ENST00000543341	KCNA4	P22459	653 aa		10.57	□□□□□ -0.72
GTF2H3-212	ENST00000543341	TRIM52	Q96A61	297 aa		10.57	□□□□□ -0.72
GTF2H3-212	ENST00000543341	IDI1	Q13907	227 aa		10.56	□□□□□ -0.72
GTF2H3-212	ENST00000543341	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.56	□□□□□ -0.72
GTF2H3-212	ENST00000543341	SCAF11	Q99590	1463 aa	Known RBP	10.56	□□□□□ -0.72
GTF2H3-212	ENST00000543341	RIMS2	Q9UQ26	1411 aa		10.55	□□□□□ -0.72
GTF2H3-212	ENST00000543341	PPP1R15A	O75807	674 aa	Predicted RBP	10.55	□□□□□ -0.72
GTF2H3-212	ENST00000543341	SIN3A	Q96ST3	1273 aa		10.55	□□□□□ -0.72
GTF2H3-212	ENST00000543341	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.54	□□□□□ -0.72
GTF2H3-212	ENST00000543341	USP54	Q70EL1	1684 aa		10.53	□□□□□ -0.72
GTF2H3-212	ENST00000543341	NALCN	Q8IZF0	1738 aa		10.53	□□□□□ -0.72
GTF2H3-212	ENST00000543341	L3MBTL2	Q969R5	705 aa		10.52	□□□□□ -0.73
GTF2H3-212	ENST00000543341	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.52	□□□□□ -0.73
GTF2H3-212	ENST00000543341	PTCH1	Q13635	1447 aa		10.52	□□□□□ -0.73
GTF2H3-212	ENST00000543341	SBNO2	Q9Y2G9	1366 aa		10.51	□□□□□ -0.73
GTF2H3-212	ENST00000543341	PIK3R4	Q99570	1358 aa		10.51	□□□□□ -0.73
GTF2H3-212	ENST00000543341	USP32	Q8NFA0	1604 aa		10.5	□□□□□ -0.73
GTF2H3-212	ENST00000543341	NBPF8	Q3BBV2	869 aa		10.5	□□□□□ -0.73
GTF2H3-212	ENST00000543341	FMN2	Q9NZ56	1722 aa		10.5	□□□□□ -0.73
GTF2H3-212	ENST00000543341	MIER1	Q8N108	512 aa		10.49	□□□□□ -0.73
GTF2H3-212	ENST00000543341	TONSL	Q96HA7	1378 aa		10.49	□□□□□ -0.73
GTF2H3-212	ENST00000543341	FAM135B	Q49AJ0	1406 aa		10.49	□□□□□ -0.73
GTF2H3-212	ENST00000543341	MYT1L	Q9UL68	1186 aa		10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	NRK	Q7Z2Y5	1582 aa		10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	AKAP12	Q02952	1782 aa		10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	PTPRU	Q92729	1446 aa		10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	NKTR	P30414	1462 aa	Known RBP	10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	C14orf93	Q9H972	538 aa	Known RBP	10.48	□□□□□ -0.73
GTF2H3-212	ENST00000543341	CDC42BPG	Q6DT37	1551 aa		10.47	□□□□□ -0.73
GTF2H3-212	ENST00000543341	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.47	□□□□□ -0.73
GTF2H3-212	ENST00000543341	ADGRF5	Q8IZF2	1346 aa		10.46	□□□□□ -0.73
GTF2H3-212	ENST00000543341	TULP4	Q9NRJ4	1543 aa		10.46	□□□□□ -0.73
GTF2H3-212	ENST00000543341	ITSN1	Q15811	1721 aa		10.46	□□□□□ -0.73
GTF2H3-212	ENST00000543341	LTBP4	Q8N2S1	1624 aa		10.46	□□□□□ -0.74
GTF2H3-212	ENST00000543341	CEBPA	P49715	358 aa	Predicted RBP	10.46	□□□□□ -0.74
GTF2H3-212	ENST00000543341	SIRT1	Q96EB6	747 aa		10.45	□□□□□ -0.74
GTF2H3-212	ENST00000543341	MON2	Q7Z3U7	1717 aa		10.45	□□□□□ -0.74
GTF2H3-212	ENST00000543341	MARF1	Q9Y4F3	1742 aa	Known RBP	10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	NPHP4	O75161	1426 aa	Predicted RBP	10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	LRPPRC	P42704	1394 aa	Known RBP	10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	ABCC11	Q96J66	1382 aa		10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	MLEC	Q14165	292 aa		10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	NCOA3	Q9Y6Q9	1424 aa		10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	ANKRD26	Q9UPS8	1709 aa		10.44	□□□□□ -0.74
GTF2H3-212	ENST00000543341	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
GTF2H3-212	ENST00000543341	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.43	□□□□□ -0.74
GTF2H3-212	ENST00000543341	LTK	P29376	864 aa		10.43	□□□□□ -0.74
GTF2H3-212	ENST00000543341	MET	P08581	1390 aa		10.41	□□□□□ -0.74
GTF2H3-212	ENST00000543341	CRYBG1	Q9Y4K1	1723 aa		10.41	□□□□□ -0.74
GTF2H3-212	ENST00000543341	VGF	O15240	615 aa	Predicted RBP	10.41	□□□□□ -0.74
GTF2H3-212	ENST00000543341	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.4	□□□□□ -0.74
GTF2H3-212	ENST00000543341	IQSEC2	Q5JU85	1478 aa		10.39	□□□□□ -0.75
GTF2H3-212	ENST00000543341	LRRC7	Q96NW7	1537 aa		10.39	□□□□□ -0.75
GTF2H3-212	ENST00000543341	TBX22	Q9Y458	520 aa		10.39	□□□□□ -0.75
GTF2H3-212	ENST00000543341	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	RGPD8	O14715	1765 aa	Predicted RBP	10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	DCAF11	Q8TEB1	546 aa		10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	ESF1	Q9H501	851 aa	Known RBP	10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	KIF1A	Q12756	1690 aa		10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	TESK2	Q96S53	571 aa		10.38	□□□□□ -0.75
GTF2H3-212	ENST00000543341	DCC	P43146	1447 aa		10.37	□□□□□ -0.75
GTF2H3-212	ENST00000543341	USP47	Q96K76	1375 aa		10.37	□□□□□ -0.75
GTF2H3-212	ENST00000543341	PUS7	Q96PZ0	661 aa	Known RBP	10.36	□□□□□ -0.75
GTF2H3-212	ENST00000543341	NHSL1	Q5SYE7	1610 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms