RNA–Protein interactions for RNA: ENST00000543026.5

DDX11-224, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-224ENST00000543026 PREX1Q8TCU6 1659 aa20.49■□□□□ 0.87
DDX11-224ENST00000543026 PPLO60437 1756 aa20.48■□□□□ 0.87
DDX11-224ENST00000543026 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
DDX11-224ENST00000543026 ADGRF5Q8IZF2 1346 aa20.47■□□□□ 0.87
DDX11-224ENST00000543026 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
DDX11-224ENST00000543026 CLTCQ00610 1675 aaKnown RBP20.44■□□□□ 0.86
DDX11-224ENST00000543026 TESK2Q96S53 571 aa20.44■□□□□ 0.86
DDX11-224ENST00000543026 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
DDX11-224ENST00000543026 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
DDX11-224ENST00000543026 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
DDX11-224ENST00000543026 DISP3Q9P2K9 1392 aa20.41■□□□□ 0.86
DDX11-224ENST00000543026 CFAP70Q5T0N1 1121 aa20.41■□□□□ 0.86
DDX11-224ENST00000543026 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
DDX11-224ENST00000543026 SLC52A1Q9NWF4 448 aa20.41■□□□□ 0.86
DDX11-224ENST00000543026 MLECQ14165 292 aa20.4■□□□□ 0.86
DDX11-224ENST00000543026 IDI1Q13907 227 aa20.39■□□□□ 0.86
DDX11-224ENST00000543026 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.86
DDX11-224ENST00000543026 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
DDX11-224ENST00000543026 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
DDX11-224ENST00000543026 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
DDX11-224ENST00000543026 TMF1P82094 1093 aa20.38■□□□□ 0.85
DDX11-224ENST00000543026 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
DDX11-224ENST00000543026 MYO5BQ9ULV0 1848 aa20.37■□□□□ 0.85
DDX11-224ENST00000543026 TMEM131LA2VDJ0 1609 aa20.36■□□□□ 0.85
DDX11-224ENST00000543026 SETBP1Q9Y6X0 1596 aa20.36■□□□□ 0.85
DDX11-224ENST00000543026 MYT1Q01538 1121 aa20.34■□□□□ 0.85
DDX11-224ENST00000543026 SPATA31D1Q6ZQQ2 1576 aa20.33■□□□□ 0.85
DDX11-224ENST00000543026 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
DDX11-224ENST00000543026 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
DDX11-224ENST00000543026 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
DDX11-224ENST00000543026 ADGRB1O14514 1584 aa20.3■□□□□ 0.84
DDX11-224ENST00000543026 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
DDX11-224ENST00000543026 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
DDX11-224ENST00000543026 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
DDX11-224ENST00000543026 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
DDX11-224ENST00000543026 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
DDX11-224ENST00000543026 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
DDX11-224ENST00000543026 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
DDX11-224ENST00000543026 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
DDX11-224ENST00000543026 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
DDX11-224ENST00000543026 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
DDX11-224ENST00000543026 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
DDX11-224ENST00000543026 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
DDX11-224ENST00000543026 PANK3Q9H999 370 aa20.23■□□□□ 0.83
DDX11-224ENST00000543026 KTN1Q86UP2 1357 aaKnown RBP20.23■□□□□ 0.83
DDX11-224ENST00000543026 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
DDX11-224ENST00000543026 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
DDX11-224ENST00000543026 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
DDX11-224ENST00000543026 SBNO2Q9Y2G9 1366 aa20.22■□□□□ 0.83
DDX11-224ENST00000543026 A2ML1A8K2U0 1454 aa20.22■□□□□ 0.83
DDX11-224ENST00000543026 MYOM1P52179 1685 aa20.21■□□□□ 0.83
DDX11-224ENST00000543026 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
DDX11-224ENST00000543026 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
DDX11-224ENST00000543026 RALBP1Q15311 655 aa20.2■□□□□ 0.82
DDX11-224ENST00000543026 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
DDX11-224ENST00000543026 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
DDX11-224ENST00000543026 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
DDX11-224ENST00000543026 PARD3Q8TEW0 1356 aa20.17■□□□□ 0.82
DDX11-224ENST00000543026 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
DDX11-224ENST00000543026 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX11-224ENST00000543026 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
DDX11-224ENST00000543026 TNRQ92752 1358 aa20.16■□□□□ 0.82
DDX11-224ENST00000543026 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
DDX11-224ENST00000543026 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
DDX11-224ENST00000543026 BRD4O60885 1362 aaPredicted RBP20.12■□□□□ 0.81
DDX11-224ENST00000543026 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
DDX11-224ENST00000543026 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
DDX11-224ENST00000543026 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
DDX11-224ENST00000543026 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
DDX11-224ENST00000543026 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
DDX11-224ENST00000543026 YTHDC2Q9H6S0 1430 aaKnown RBP20.09■□□□□ 0.81
DDX11-224ENST00000543026 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
DDX11-224ENST00000543026 STK26Q9P289 416 aa20.09■□□□□ 0.81
DDX11-224ENST00000543026 UBR1Q8IWV7 1749 aa20.08■□□□□ 0.81
DDX11-224ENST00000543026 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
DDX11-224ENST00000543026 C3P01024 1663 aa20.08■□□□□ 0.8
DDX11-224ENST00000543026 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
DDX11-224ENST00000543026 PTPRMP28827 1452 aa20.07■□□□□ 0.8
DDX11-224ENST00000543026 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
DDX11-224ENST00000543026 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX11-224ENST00000543026 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
DDX11-224ENST00000543026 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
DDX11-224ENST00000543026 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
DDX11-224ENST00000543026 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
DDX11-224ENST00000543026 EVC2Q86UK5 1308 aa20.04■□□□□ 0.8
DDX11-224ENST00000543026 CEBPAP49715 358 aaPredicted RBP20.04■□□□□ 0.8
DDX11-224ENST00000543026 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDX11-224ENST00000543026 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
DDX11-224ENST00000543026 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.79
DDX11-224ENST00000543026 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
DDX11-224ENST00000543026 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
DDX11-224ENST00000543026 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
DDX11-224ENST00000543026 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
DDX11-224ENST00000543026 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
DDX11-224ENST00000543026 POGKQ9P215 609 aa20■□□□□ 0.79
DDX11-224ENST00000543026 DLC1Q96QB1 1528 aa20■□□□□ 0.79
DDX11-224ENST00000543026 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
DDX11-224ENST00000543026 CARD14Q9BXL6 1004 aa19.99■□□□□ 0.79
DDX11-224ENST00000543026 FKBP8Q14318 412 aa19.98■□□□□ 0.79
DDX11-224ENST00000543026 SLC12A5Q9H2X9 1139 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms