RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
DDX11-223ENST00000542838 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
DDX11-223ENST00000542838 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
DDX11-223ENST00000542838 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
DDX11-223ENST00000542838 SYNMO15061 1565 aa16.85■□□□□ 0.29
DDX11-223ENST00000542838 ASXL1Q8IXJ9 1541 aa16.84■□□□□ 0.29
DDX11-223ENST00000542838 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
DDX11-223ENST00000542838 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
DDX11-223ENST00000542838 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
DDX11-223ENST00000542838 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.29
DDX11-223ENST00000542838 RGS3P49796 1198 aa16.83■□□□□ 0.28
DDX11-223ENST00000542838 RTN4Q9NQC3 1192 aaKnown RBP16.83■□□□□ 0.28
DDX11-223ENST00000542838 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
DDX11-223ENST00000542838 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
DDX11-223ENST00000542838 GSE1Q14687 1217 aa16.81■□□□□ 0.28
DDX11-223ENST00000542838 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
DDX11-223ENST00000542838 TRMT2AQ8IZ69 625 aaKnown RBP16.8■□□□□ 0.28
DDX11-223ENST00000542838 APAF1O14727 1248 aa16.79■□□□□ 0.28
DDX11-223ENST00000542838 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
DDX11-223ENST00000542838 MYOM1P52179 1685 aa16.79■□□□□ 0.28
DDX11-223ENST00000542838 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
DDX11-223ENST00000542838 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
DDX11-223ENST00000542838 CEP152O94986 1710 aa16.78■□□□□ 0.28
DDX11-223ENST00000542838 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
DDX11-223ENST00000542838 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
DDX11-223ENST00000542838 EFCAB2Q5VUJ9 269 aa16.78■□□□□ 0.28
DDX11-223ENST00000542838 BCAR3O75815 825 aa16.77■□□□□ 0.28
DDX11-223ENST00000542838 TRPM2O94759 1503 aa16.77■□□□□ 0.27
DDX11-223ENST00000542838 ABCC2Q92887 1545 aa16.77■□□□□ 0.27
DDX11-223ENST00000542838 PLCH2O75038 1416 aa16.77■□□□□ 0.27
DDX11-223ENST00000542838 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
DDX11-223ENST00000542838 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
DDX11-223ENST00000542838 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
DDX11-223ENST00000542838 E9PSI1 815 aa16.75■□□□□ 0.27
DDX11-223ENST00000542838 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
DDX11-223ENST00000542838 CHD1O14646 1710 aa16.75■□□□□ 0.27
DDX11-223ENST00000542838 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
DDX11-223ENST00000542838 ABCC1P33527 1531 aa16.74■□□□□ 0.27
DDX11-223ENST00000542838 FRAT1Q92837 279 aaPredicted RBP16.73■□□□□ 0.27
DDX11-223ENST00000542838 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
DDX11-223ENST00000542838 PTPRTO14522 1441 aa16.72■□□□□ 0.27
DDX11-223ENST00000542838 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
DDX11-223ENST00000542838 SHROOM2Q13796 1616 aa16.72■□□□□ 0.27
DDX11-223ENST00000542838 IGHDP01880 384 aa16.71■□□□□ 0.27
DDX11-223ENST00000542838 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
DDX11-223ENST00000542838 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
DDX11-223ENST00000542838 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
DDX11-223ENST00000542838 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
DDX11-223ENST00000542838 CANXP27824 592 aaKnown RBP16.69■□□□□ 0.26
DDX11-223ENST00000542838 VIRMAQ69YN4 1812 aaKnown RBP16.69■□□□□ 0.26
DDX11-223ENST00000542838 KIAA1210Q9ULL0 1709 aa16.69■□□□□ 0.26
DDX11-223ENST00000542838 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
DDX11-223ENST00000542838 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
DDX11-223ENST00000542838 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
DDX11-223ENST00000542838 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
DDX11-223ENST00000542838 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
DDX11-223ENST00000542838 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
DDX11-223ENST00000542838 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
DDX11-223ENST00000542838 TET3O43151 1660 aa16.67■□□□□ 0.26
DDX11-223ENST00000542838 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
DDX11-223ENST00000542838 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
DDX11-223ENST00000542838 RTEL1-TNFRSF6BF6WH68 1400 aa16.66■□□□□ 0.26
DDX11-223ENST00000542838 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
DDX11-223ENST00000542838 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
DDX11-223ENST00000542838 KANK1Q14678 1352 aa16.66■□□□□ 0.26
DDX11-223ENST00000542838 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
DDX11-223ENST00000542838 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
DDX11-223ENST00000542838 DEPDC5O75140 1603 aa16.65■□□□□ 0.26
DDX11-223ENST00000542838 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
DDX11-223ENST00000542838 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
DDX11-223ENST00000542838 USP19O94966 1318 aa16.64■□□□□ 0.25
DDX11-223ENST00000542838 MAPK8IP3Q9UPT6 1336 aa16.64■□□□□ 0.25
DDX11-223ENST00000542838 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
DDX11-223ENST00000542838 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
DDX11-223ENST00000542838 ADGRF5Q8IZF2 1346 aa16.63■□□□□ 0.25
DDX11-223ENST00000542838 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
DDX11-223ENST00000542838 SEC24BO95487 1268 aa16.62■□□□□ 0.25
DDX11-223ENST00000542838 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
DDX11-223ENST00000542838 KIF3BO15066 747 aa16.61■□□□□ 0.25
DDX11-223ENST00000542838 MYOM2P54296 1465 aa16.6■□□□□ 0.25
DDX11-223ENST00000542838 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
DDX11-223ENST00000542838 BECN1Q14457 450 aa16.59■□□□□ 0.25
DDX11-223ENST00000542838 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
DDX11-223ENST00000542838 NEURL4Q96JN8 1562 aa16.59■□□□□ 0.25
DDX11-223ENST00000542838 KIF1BO60333 1816 aa16.59■□□□□ 0.25
DDX11-223ENST00000542838 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
DDX11-223ENST00000542838 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
DDX11-223ENST00000542838 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
DDX11-223ENST00000542838 PMFBP1Q8TBY8 1022 aa16.58■□□□□ 0.24
DDX11-223ENST00000542838 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
DDX11-223ENST00000542838 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
DDX11-223ENST00000542838 ATP7AQ04656 1500 aa16.57■□□□□ 0.24
DDX11-223ENST00000542838 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
DDX11-223ENST00000542838 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
DDX11-223ENST00000542838 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
DDX11-223ENST00000542838 UHRF1BP1LA0JNW5 1464 aa16.56■□□□□ 0.24
DDX11-223ENST00000542838 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
DDX11-223ENST00000542838 ARAP3Q8WWN8 1544 aa16.56■□□□□ 0.24
DDX11-223ENST00000542838 MYO3AQ8NEV4 1616 aa16.55■□□□□ 0.24
DDX11-223ENST00000542838 SLKQ9H2G2 1235 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms