RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 ZMYM3Q14202 1370 aa29.1■■■□□ 2.25
CERS1-202ENST00000542296 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
CERS1-202ENST00000542296 ESF1Q9H501 851 aaKnown RBP29.08■■■□□ 2.25
CERS1-202ENST00000542296 NEXMIFQ5QGS0 1516 aa29.06■■■□□ 2.24
CERS1-202ENST00000542296 C11orf95C9JLR9 678 aaPredicted RBP29.06■■■□□ 2.24
CERS1-202ENST00000542296 CHGAP10645 457 aaKnown RBP29.06■■■□□ 2.24
CERS1-202ENST00000542296 MYO5BQ9ULV0 1848 aa29.05■■■□□ 2.24
CERS1-202ENST00000542296 CCDC7Q96M83 1385 aa29.05■■■□□ 2.24
CERS1-202ENST00000542296 ADGRF5Q8IZF2 1346 aa29.04■■■□□ 2.24
CERS1-202ENST00000542296 IQGAP1P46940 1657 aa29.04■■■□□ 2.24
CERS1-202ENST00000542296 PIK3C2GO75747 1445 aa29.02■■■□□ 2.24
CERS1-202ENST00000542296 ZFYVE9O95405 1425 aa29.02■■■□□ 2.24
CERS1-202ENST00000542296 ST20-MTHFSA0A0A6YYL1 179 aa29■■■□□ 2.23
CERS1-202ENST00000542296 CENPBP07199 599 aaPredicted RBP29■■■□□ 2.23
CERS1-202ENST00000542296 KIF7Q2M1P5 1343 aa28.99■■■□□ 2.23
CERS1-202ENST00000542296 SETBP1Q9Y6X0 1596 aa28.98■■■□□ 2.23
CERS1-202ENST00000542296 FER1L4A9Z1Z3 1794 aa28.96■■■□□ 2.23
CERS1-202ENST00000542296 SCAF11Q99590 1463 aaKnown RBP28.96■■■□□ 2.23
CERS1-202ENST00000542296 VGFO15240 615 aaPredicted RBP28.96■■■□□ 2.23
CERS1-202ENST00000542296 KDM5AP29375 1690 aaKnown RBP28.94■■■□□ 2.22
CERS1-202ENST00000542296 A2ML1A8K2U0 1454 aa28.93■■■□□ 2.22
CERS1-202ENST00000542296 CFAP70Q5T0N1 1121 aa28.92■■■□□ 2.22
CERS1-202ENST00000542296 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
CERS1-202ENST00000542296 C3P01024 1663 aa28.91■■■□□ 2.22
CERS1-202ENST00000542296 TNRQ92752 1358 aa28.9■■■□□ 2.22
CERS1-202ENST00000542296 TESK2Q96S53 571 aa28.89■■■□□ 2.22
CERS1-202ENST00000542296 ADGRB1O14514 1584 aa28.88■■■□□ 2.21
CERS1-202ENST00000542296 EIF3AQ14152 1382 aaKnown RBP28.84■■■□□ 2.21
CERS1-202ENST00000542296 STAG3Q9UJ98 1225 aa28.84■■■□□ 2.21
CERS1-202ENST00000542296 NLRP1Q9C000 1473 aa28.83■■■□□ 2.21
CERS1-202ENST00000542296 MYO3AQ8NEV4 1616 aa28.82■■■□□ 2.2
CERS1-202ENST00000542296 UBR1Q8IWV7 1749 aa28.82■■■□□ 2.2
CERS1-202ENST00000542296 YTHDC1Q96MU7 727 aaKnown RBP28.79■■■□□ 2.2
CERS1-202ENST00000542296 ADAMTSL3P82987 1691 aa28.78■■■□□ 2.2
CERS1-202ENST00000542296 RIMS2Q9UQ26 1411 aa28.78■■■□□ 2.2
CERS1-202ENST00000542296 NUTM2DQ5VT03 806 aaPredicted RBP28.77■■■□□ 2.2
CERS1-202ENST00000542296 ANP32CO43423 234 aa28.75■■■□□ 2.19
CERS1-202ENST00000542296 CEBPAP49715 358 aaPredicted RBP28.75■■■□□ 2.19
CERS1-202ENST00000542296 DISP3Q9P2K9 1392 aa28.74■■■□□ 2.19
CERS1-202ENST00000542296 SLC24A1O60721 1099 aa28.74■■■□□ 2.19
CERS1-202ENST00000542296 TMF1P82094 1093 aa28.74■■■□□ 2.19
CERS1-202ENST00000542296 SBNO2Q9Y2G9 1366 aa28.74■■■□□ 2.19
CERS1-202ENST00000542296 ASXL1Q8IXJ9 1541 aa28.72■■■□□ 2.19
CERS1-202ENST00000542296 ALKQ9UM73 1620 aa28.72■■■□□ 2.19
CERS1-202ENST00000542296 RIMS1Q86UR5 1692 aaKnown RBP28.71■■■□□ 2.19
CERS1-202ENST00000542296 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.71■■■□□ 2.19
CERS1-202ENST00000542296 TMEM2Q9UHN6 1383 aa28.69■■■□□ 2.18
CERS1-202ENST00000542296 SETD1AO15047 1707 aaKnown RBP28.69■■■□□ 2.18
CERS1-202ENST00000542296 CCER2I3L3R5 266 aa28.69■■■□□ 2.18
CERS1-202ENST00000542296 TMEM132EQ6IEE7 984 aa28.69■■■□□ 2.18
CERS1-202ENST00000542296 ARHGEF28Q8N1W1 1705 aaKnown RBP28.68■■■□□ 2.18
CERS1-202ENST00000542296 HDGFP51858 240 aaKnown RBP28.67■■■□□ 2.18
CERS1-202ENST00000542296 NRXN3Q9Y4C0 1643 aa28.66■■■□□ 2.18
CERS1-202ENST00000542296 POLR3GLQ9BT43 218 aa28.65■■■□□ 2.18
CERS1-202ENST00000542296 CDCA8Q53HL2 280 aa28.65■■■□□ 2.18
CERS1-202ENST00000542296 QRICH2Q9H0J4 1663 aa28.64■■■□□ 2.17
CERS1-202ENST00000542296 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.17
CERS1-202ENST00000542296 TRAK1Q9UPV9 953 aa28.63■■■□□ 2.17
CERS1-202ENST00000542296 SLIT1O75093 1534 aa28.62■■■□□ 2.17
CERS1-202ENST00000542296 PTPRMP28827 1452 aa28.62■■■□□ 2.17
CERS1-202ENST00000542296 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
CERS1-202ENST00000542296 YTHDC2Q9H6S0 1430 aaKnown RBP28.59■■■□□ 2.17
CERS1-202ENST00000542296 PRKRIP1Q9H875 184 aaPredicted RBP28.57■■■□□ 2.16
CERS1-202ENST00000542296 SETD1BQ9UPS6 1966 aaKnown RBP28.56■■■□□ 2.16
CERS1-202ENST00000542296 CEP170BQ9Y4F5 1589 aaPredicted RBP28.55■■■□□ 2.16
CERS1-202ENST00000542296 MYOM1P52179 1685 aa28.54■■■□□ 2.16
CERS1-202ENST00000542296 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
CERS1-202ENST00000542296 ZNF142P52746 1687 aaPredicted RBP28.53■■■□□ 2.16
CERS1-202ENST00000542296 PLEKHG1Q9ULL1 1385 aa28.53■■■□□ 2.16
CERS1-202ENST00000542296 SCAF1Q9H7N4 1312 aaKnown RBP28.53■■■□□ 2.16
CERS1-202ENST00000542296 THEMISQ8N1K5 641 aaPredicted RBP28.53■■■□□ 2.16
CERS1-202ENST00000542296 PER1O15534 1290 aaPredicted RBP28.51■■■□□ 2.16
CERS1-202ENST00000542296 LRPPRCP42704 1394 aaKnown RBP28.51■■■□□ 2.15
CERS1-202ENST00000542296 LTKP29376 864 aa28.51■■■□□ 2.15
CERS1-202ENST00000542296 ABCC11Q96J66 1382 aa28.49■■■□□ 2.15
CERS1-202ENST00000542296 PLPPR3Q6T4P5 718 aa28.49■■■□□ 2.15
CERS1-202ENST00000542296 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
CERS1-202ENST00000542296 ADAMTS13Q76LX8 1427 aa28.48■■■□□ 2.15
CERS1-202ENST00000542296 KNDC1Q76NI1 1749 aa28.47■■■□□ 2.15
CERS1-202ENST00000542296 MED14O60244 1454 aa28.47■■■□□ 2.15
CERS1-202ENST00000542296 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
CERS1-202ENST00000542296 TXNDC2Q86VQ3 553 aa28.46■■■□□ 2.15
CERS1-202ENST00000542296 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
CERS1-202ENST00000542296 METP08581 1390 aa28.46■■■□□ 2.15
CERS1-202ENST00000542296 KTN1Q86UP2 1357 aaKnown RBP28.46■■■□□ 2.15
CERS1-202ENST00000542296 PANK3Q9H999 370 aa28.45■■■□□ 2.15
CERS1-202ENST00000542296 STK26Q9P289 416 aa28.45■■■□□ 2.15
CERS1-202ENST00000542296 TULP4Q9NRJ4 1543 aa28.45■■■□□ 2.14
CERS1-202ENST00000542296 TECPR2O15040 1411 aa28.44■■■□□ 2.14
CERS1-202ENST00000542296 SIRT1Q96EB6 747 aa28.41■■■□□ 2.14
CERS1-202ENST00000542296 PRAM1Q96QH2 718 aa28.41■■■□□ 2.14
CERS1-202ENST00000542296 EVC2Q86UK5 1308 aa28.41■■■□□ 2.14
CERS1-202ENST00000542296 CPS1P31327 1500 aa28.39■■■□□ 2.13
CERS1-202ENST00000542296 DIP2AQ14689 1571 aa28.39■■■□□ 2.13
CERS1-202ENST00000542296 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
CERS1-202ENST00000542296 RALBP1Q15311 655 aa28.36■■■□□ 2.13
CERS1-202ENST00000542296 POGKQ9P215 609 aa28.36■■■□□ 2.13
CERS1-202ENST00000542296 GTF3C3Q9Y5Q9 886 aa28.35■■■□□ 2.13
CERS1-202ENST00000542296 PARD3Q8TEW0 1356 aa28.34■■■□□ 2.13
CERS1-202ENST00000542296 TBX22Q9Y458 520 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms