RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
TMEM50B-210ENST00000542230 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
TMEM50B-210ENST00000542230 MYOM2P54296 1465 aa23.74■■□□□ 1.39
TMEM50B-210ENST00000542230 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
TMEM50B-210ENST00000542230 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
TMEM50B-210ENST00000542230 ARHGAP31Q2M1Z3 1444 aa23.72■■□□□ 1.39
TMEM50B-210ENST00000542230 SCAF11Q99590 1463 aaKnown RBP23.71■■□□□ 1.39
TMEM50B-210ENST00000542230 FAM9BQ8IZU0 186 aa23.7■■□□□ 1.38
TMEM50B-210ENST00000542230 TMF1P82094 1093 aa23.7■■□□□ 1.38
TMEM50B-210ENST00000542230 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
TMEM50B-210ENST00000542230 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
TMEM50B-210ENST00000542230 ZC3H13Q5T200 1668 aaKnown RBP23.68■■□□□ 1.38
TMEM50B-210ENST00000542230 TMEM132EQ6IEE7 984 aa23.68■■□□□ 1.38
TMEM50B-210ENST00000542230 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
TMEM50B-210ENST00000542230 PPLO60437 1756 aa23.66■■□□□ 1.38
TMEM50B-210ENST00000542230 PER1O15534 1290 aaPredicted RBP23.66■■□□□ 1.38
TMEM50B-210ENST00000542230 PANK3Q9H999 370 aa23.65■■□□□ 1.38
TMEM50B-210ENST00000542230 PIK3C2GO75747 1445 aa23.64■■□□□ 1.38
TMEM50B-210ENST00000542230 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
TMEM50B-210ENST00000542230 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.37
TMEM50B-210ENST00000542230 AGLP35573 1532 aa23.63■■□□□ 1.37
TMEM50B-210ENST00000542230 REREQ9P2R6 1566 aa23.63■■□□□ 1.37
TMEM50B-210ENST00000542230 C14orf93Q9H972 538 aaKnown RBP23.63■■□□□ 1.37
TMEM50B-210ENST00000542230 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
TMEM50B-210ENST00000542230 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
TMEM50B-210ENST00000542230 ARHGEF40Q8TER5 1519 aa23.61■■□□□ 1.37
TMEM50B-210ENST00000542230 CLTCQ00610 1675 aaKnown RBP23.61■■□□□ 1.37
TMEM50B-210ENST00000542230 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
TMEM50B-210ENST00000542230 RPGRIP1LQ68CZ1 1315 aa23.6■■□□□ 1.37
TMEM50B-210ENST00000542230 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
TMEM50B-210ENST00000542230 ERVK-7P63135 1459 aa23.58■■□□□ 1.37
TMEM50B-210ENST00000542230 CC2D1BQ5T0F9 858 aaKnown RBP23.58■■□□□ 1.37
TMEM50B-210ENST00000542230 SENP3-EIF4A1A0A087X0R7 540 aa23.57■■□□□ 1.36
TMEM50B-210ENST00000542230 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
TMEM50B-210ENST00000542230 VGFO15240 615 aaPredicted RBP23.55■■□□□ 1.36
TMEM50B-210ENST00000542230 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
TMEM50B-210ENST00000542230 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
TMEM50B-210ENST00000542230 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
TMEM50B-210ENST00000542230 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
TMEM50B-210ENST00000542230 CENPJQ9HC77 1338 aaPredicted RBP23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 SETBP1Q9Y6X0 1596 aa23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 RALBP1Q15311 655 aa23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 KTN1Q86UP2 1357 aaKnown RBP23.5■■□□□ 1.35
TMEM50B-210ENST00000542230 MYBBP1AQ9BQG0 1328 aaKnown RBP23.49■■□□□ 1.35
TMEM50B-210ENST00000542230 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
TMEM50B-210ENST00000542230 PNISRQ8TF01 805 aaKnown RBP23.49■■□□□ 1.35
TMEM50B-210ENST00000542230 ZMYM3Q14202 1370 aa23.49■■□□□ 1.35
TMEM50B-210ENST00000542230 STK26Q9P289 416 aa23.48■■□□□ 1.35
TMEM50B-210ENST00000542230 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM50B-210ENST00000542230 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
TMEM50B-210ENST00000542230 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
TMEM50B-210ENST00000542230 MYOM1P52179 1685 aa23.45■■□□□ 1.34
TMEM50B-210ENST00000542230 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
TMEM50B-210ENST00000542230 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
TMEM50B-210ENST00000542230 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 AMER1Q5JTC6 1135 aaPredicted RBP23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
TMEM50B-210ENST00000542230 KDM5AP29375 1690 aaKnown RBP23.41■■□□□ 1.34
TMEM50B-210ENST00000542230 BRD4O60885 1362 aaPredicted RBP23.41■■□□□ 1.34
TMEM50B-210ENST00000542230 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
TMEM50B-210ENST00000542230 CARD14Q9BXL6 1004 aa23.4■■□□□ 1.34
TMEM50B-210ENST00000542230 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
TMEM50B-210ENST00000542230 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
TMEM50B-210ENST00000542230 QRICH2Q9H0J4 1663 aa23.39■■□□□ 1.33
TMEM50B-210ENST00000542230 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
TMEM50B-210ENST00000542230 SLC12A5Q9H2X9 1139 aa23.37■■□□□ 1.33
TMEM50B-210ENST00000542230 ZBED9Q6R2W3 1325 aa23.36■■□□□ 1.33
TMEM50B-210ENST00000542230 ARHGEF28Q8N1W1 1705 aaKnown RBP23.35■■□□□ 1.33
TMEM50B-210ENST00000542230 RIMS2Q9UQ26 1411 aa23.34■■□□□ 1.33
TMEM50B-210ENST00000542230 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
TMEM50B-210ENST00000542230 FKBP8Q14318 412 aa23.33■■□□□ 1.33
TMEM50B-210ENST00000542230 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
TMEM50B-210ENST00000542230 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
TMEM50B-210ENST00000542230 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
TMEM50B-210ENST00000542230 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
TMEM50B-210ENST00000542230 TNRQ92752 1358 aa23.31■■□□□ 1.32
TMEM50B-210ENST00000542230 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
TMEM50B-210ENST00000542230 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
TMEM50B-210ENST00000542230 PPP2R1AP30153 589 aa23.3■■□□□ 1.32
TMEM50B-210ENST00000542230 PTPRMP28827 1452 aa23.3■■□□□ 1.32
TMEM50B-210ENST00000542230 BCANQ96GW7 911 aa23.29■■□□□ 1.32
TMEM50B-210ENST00000542230 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
TMEM50B-210ENST00000542230 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
TMEM50B-210ENST00000542230 EVC2Q86UK5 1308 aa23.26■■□□□ 1.31
TMEM50B-210ENST00000542230 WAPLQ7Z5K2 1190 aa23.26■■□□□ 1.31
TMEM50B-210ENST00000542230 POGKQ9P215 609 aa23.25■■□□□ 1.31
TMEM50B-210ENST00000542230 IRX6P78412 446 aaPredicted RBP23.24■■□□□ 1.31
TMEM50B-210ENST00000542230 NSD3Q9BZ95 1437 aa23.22■■□□□ 1.31
TMEM50B-210ENST00000542230 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
TMEM50B-210ENST00000542230 METP08581 1390 aa23.22■■□□□ 1.31
TMEM50B-210ENST00000542230 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
TMEM50B-210ENST00000542230 NRXN3Q9Y4C0 1643 aa23.2■■□□□ 1.31
TMEM50B-210ENST00000542230 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.3
TMEM50B-210ENST00000542230 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
TMEM50B-210ENST00000542230 ADAMTS8Q9UP79 889 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms