RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
CNOT9-208ENST00000542068 CDCA8Q53HL2 280 aa19.91■□□□□ 0.78
CNOT9-208ENST00000542068 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
CNOT9-208ENST00000542068 PLCH2O75038 1416 aa19.91■□□□□ 0.78
CNOT9-208ENST00000542068 GSE1Q14687 1217 aa19.91■□□□□ 0.78
CNOT9-208ENST00000542068 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
CNOT9-208ENST00000542068 FRAT2O75474 233 aaPredicted RBP19.9■□□□□ 0.78
CNOT9-208ENST00000542068 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
CNOT9-208ENST00000542068 ARXQ96QS3 562 aa19.9■□□□□ 0.78
CNOT9-208ENST00000542068 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
CNOT9-208ENST00000542068 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.77
CNOT9-208ENST00000542068 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
CNOT9-208ENST00000542068 STK26Q9P289 416 aa19.89■□□□□ 0.77
CNOT9-208ENST00000542068 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
CNOT9-208ENST00000542068 C8orf34Q49A92 452 aa19.86■□□□□ 0.77
CNOT9-208ENST00000542068 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
CNOT9-208ENST00000542068 KDM2BQ8NHM5 1336 aa19.86■□□□□ 0.77
CNOT9-208ENST00000542068 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
CNOT9-208ENST00000542068 PREX2Q70Z35 1606 aa19.85■□□□□ 0.77
CNOT9-208ENST00000542068 COL17A1Q9UMD9 1497 aaPredicted RBP19.85■□□□□ 0.77
CNOT9-208ENST00000542068 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
CNOT9-208ENST00000542068 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
CNOT9-208ENST00000542068 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
CNOT9-208ENST00000542068 EIF5BO60841 1220 aaKnown RBP19.83■□□□□ 0.77
CNOT9-208ENST00000542068 RAPGEF3O95398 923 aa19.83■□□□□ 0.76
CNOT9-208ENST00000542068 PANK1Q8TE04 598 aa19.83■□□□□ 0.76
CNOT9-208ENST00000542068 SLKQ9H2G2 1235 aaPredicted RBP19.83■□□□□ 0.76
CNOT9-208ENST00000542068 COG6Q9Y2V7 657 aa19.83■□□□□ 0.76
CNOT9-208ENST00000542068 AMER1Q5JTC6 1135 aaPredicted RBP19.82■□□□□ 0.76
CNOT9-208ENST00000542068 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
CNOT9-208ENST00000542068 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
CNOT9-208ENST00000542068 IGHDP01880 384 aa19.81■□□□□ 0.76
CNOT9-208ENST00000542068 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
CNOT9-208ENST00000542068 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
CNOT9-208ENST00000542068 MORC1Q86VD1 984 aa19.8■□□□□ 0.76
CNOT9-208ENST00000542068 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
CNOT9-208ENST00000542068 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
CNOT9-208ENST00000542068 FANCAO15360 1455 aa19.79■□□□□ 0.76
CNOT9-208ENST00000542068 E9PCH4 1651 aa19.78■□□□□ 0.76
CNOT9-208ENST00000542068 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
CNOT9-208ENST00000542068 SEC24BO95487 1268 aa19.77■□□□□ 0.76
CNOT9-208ENST00000542068 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
CNOT9-208ENST00000542068 CFAP65Q6ZU64 1925 aaKnown RBP19.77■□□□□ 0.76
CNOT9-208ENST00000542068 CLUAP1Q96AJ1 413 aa19.77■□□□□ 0.76
CNOT9-208ENST00000542068 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
CNOT9-208ENST00000542068 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
CNOT9-208ENST00000542068 PRKCSHP14314 528 aaPredicted RBP19.75■□□□□ 0.75
CNOT9-208ENST00000542068 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
CNOT9-208ENST00000542068 MYO5CQ9NQX4 1742 aa19.75■□□□□ 0.75
CNOT9-208ENST00000542068 EIF3AQ14152 1382 aaKnown RBP19.75■□□□□ 0.75
CNOT9-208ENST00000542068 TNNQ9UQP3 1299 aa19.73■□□□□ 0.75
CNOT9-208ENST00000542068 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
CNOT9-208ENST00000542068 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
CNOT9-208ENST00000542068 MLECQ14165 292 aa19.72■□□□□ 0.75
CNOT9-208ENST00000542068 CENPJQ9HC77 1338 aaPredicted RBP19.72■□□□□ 0.75
CNOT9-208ENST00000542068 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
CNOT9-208ENST00000542068 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
CNOT9-208ENST00000542068 U2SURPO15042 1029 aaKnown RBP19.71■□□□□ 0.75
CNOT9-208ENST00000542068 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
CNOT9-208ENST00000542068 CABP2Q9NPB3 220 aa19.7■□□□□ 0.74
CNOT9-208ENST00000542068 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
CNOT9-208ENST00000542068 MAST1Q9Y2H9 1570 aa19.69■□□□□ 0.74
CNOT9-208ENST00000542068 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
CNOT9-208ENST00000542068 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
CNOT9-208ENST00000542068 ATP10AO60312 1499 aa19.69■□□□□ 0.74
CNOT9-208ENST00000542068 POGKQ9P215 609 aa19.68■□□□□ 0.74
CNOT9-208ENST00000542068 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
CNOT9-208ENST00000542068 E9PSI1 815 aa19.68■□□□□ 0.74
CNOT9-208ENST00000542068 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
CNOT9-208ENST00000542068 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
CNOT9-208ENST00000542068 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
CNOT9-208ENST00000542068 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
CNOT9-208ENST00000542068 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
CNOT9-208ENST00000542068 NOS1P29475 1434 aa19.66■□□□□ 0.74
CNOT9-208ENST00000542068 MTHFSP49914 203 aa19.65■□□□□ 0.74
CNOT9-208ENST00000542068 ABCC1P33527 1531 aa19.65■□□□□ 0.74
CNOT9-208ENST00000542068 MINK1Q8N4C8 1332 aaPredicted RBP19.64■□□□□ 0.73
CNOT9-208ENST00000542068 WWC1Q8IX03 1113 aa19.63■□□□□ 0.73
CNOT9-208ENST00000542068 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
CNOT9-208ENST00000542068 UNC13BO14795 1591 aa19.62■□□□□ 0.73
CNOT9-208ENST00000542068 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
CNOT9-208ENST00000542068 GGNBP2Q9H3C7 697 aa19.62■□□□□ 0.73
CNOT9-208ENST00000542068 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
CNOT9-208ENST00000542068 RLBP1P12271 317 aa19.61■□□□□ 0.73
CNOT9-208ENST00000542068 TCP11L2Q8N4U5 519 aa19.6■□□□□ 0.73
CNOT9-208ENST00000542068 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
CNOT9-208ENST00000542068 BECN1Q14457 450 aa19.59■□□□□ 0.73
CNOT9-208ENST00000542068 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
CNOT9-208ENST00000542068 CFAP53Q96M91 514 aa19.59■□□□□ 0.73
CNOT9-208ENST00000542068 USP19O94966 1318 aa19.59■□□□□ 0.73
CNOT9-208ENST00000542068 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
CNOT9-208ENST00000542068 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
CNOT9-208ENST00000542068 ASXL1Q8IXJ9 1541 aa19.58■□□□□ 0.73
CNOT9-208ENST00000542068 CD109Q6YHK3 1445 aa19.58■□□□□ 0.73
CNOT9-208ENST00000542068 ATP7AQ04656 1500 aa19.58■□□□□ 0.73
CNOT9-208ENST00000542068 PLXNC1O60486 1568 aa19.58■□□□□ 0.72
CNOT9-208ENST00000542068 UPF2Q9HAU5 1272 aaKnown RBP19.57■□□□□ 0.72
CNOT9-208ENST00000542068 EIF2AK4Q9P2K8 1649 aaKnown RBP19.57■□□□□ 0.72
CNOT9-208ENST00000542068 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
CNOT9-208ENST00000542068 PDZRN3Q9UPQ7 1066 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms