RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
KNTC1-211ENST00000541427 PKDCCQ504Y2 493 aa9.95□□□□□ -0.82
KNTC1-211ENST00000541427 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
KNTC1-211ENST00000541427 NPDC1Q9NQX5 325 aaPredicted RBP9.94□□□□□ -0.82
KNTC1-211ENST00000541427 PCDHB3Q9Y5E6 796 aa9.94□□□□□ -0.82
KNTC1-211ENST00000541427 MYT1Q01538 1121 aa9.93□□□□□ -0.82
KNTC1-211ENST00000541427 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
KNTC1-211ENST00000541427 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
KNTC1-211ENST00000541427 EYA1Q99502 592 aa9.92□□□□□ -0.82
KNTC1-211ENST00000541427 DGAT1O75907 488 aa9.91□□□□□ -0.82
KNTC1-211ENST00000541427 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
KNTC1-211ENST00000541427 POTECB2RU33 542 aa9.9□□□□□ -0.82
KNTC1-211ENST00000541427 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
KNTC1-211ENST00000541427 WDR70Q9NW82 654 aa9.89□□□□□ -0.83
KNTC1-211ENST00000541427 TLL1O43897 1013 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PRR20EP86478 221 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PRR20CP86479 221 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PRR20DP86480 221 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PRR20BP86481 221 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PRR20AP86496 221 aa9.88□□□□□ -0.83
KNTC1-211ENST00000541427 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
KNTC1-211ENST00000541427 ANKLE1Q8NAG6 615 aa9.87□□□□□ -0.83
KNTC1-211ENST00000541427 FAM187AA6NFU0 413 aa9.85□□□□□ -0.83
KNTC1-211ENST00000541427 S1PR4O95977 384 aa9.85□□□□□ -0.83
KNTC1-211ENST00000541427 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
KNTC1-211ENST00000541427 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
KNTC1-211ENST00000541427 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
KNTC1-211ENST00000541427 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
KNTC1-211ENST00000541427 GDF9O60383 454 aa9.82□□□□□ -0.84
KNTC1-211ENST00000541427 ACTN4O43707 911 aaKnown RBP9.81□□□□□ -0.84
KNTC1-211ENST00000541427 DNAJB2P25686 324 aa9.81□□□□□ -0.84
KNTC1-211ENST00000541427 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
KNTC1-211ENST00000541427 ST8SIA5O15466 376 aa9.79□□□□□ -0.84
KNTC1-211ENST00000541427 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
KNTC1-211ENST00000541427 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
KNTC1-211ENST00000541427 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
KNTC1-211ENST00000541427 ADH1BP00325 375 aa9.77□□□□□ -0.85
KNTC1-211ENST00000541427 CFHP08603 1231 aa9.77□□□□□ -0.85
KNTC1-211ENST00000541427 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
KNTC1-211ENST00000541427 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.85
KNTC1-211ENST00000541427 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
KNTC1-211ENST00000541427 LCE2AQ5TA79 106 aaPredicted RBP9.76□□□□□ -0.85
KNTC1-211ENST00000541427 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
KNTC1-211ENST00000541427 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
KNTC1-211ENST00000541427 RCCD1A6NED2 376 aa9.74□□□□□ -0.85
KNTC1-211ENST00000541427 NR1I2O75469 434 aa9.74□□□□□ -0.85
KNTC1-211ENST00000541427 PTGDRQ13258 359 aa9.74□□□□□ -0.85
KNTC1-211ENST00000541427 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
KNTC1-211ENST00000541427 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
KNTC1-211ENST00000541427 SLC10A3P09131 477 aa9.72□□□□□ -0.85
KNTC1-211ENST00000541427 FOXC1Q12948 553 aa9.72□□□□□ -0.85
KNTC1-211ENST00000541427 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
KNTC1-211ENST00000541427 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
KNTC1-211ENST00000541427 SCUBE3Q8IX30 993 aa9.7□□□□□ -0.86
KNTC1-211ENST00000541427 LMOD2Q6P5Q4 547 aa9.69□□□□□ -0.86
KNTC1-211ENST00000541427 DACH1Q9UI36 760 aa9.68□□□□□ -0.86
KNTC1-211ENST00000541427 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
KNTC1-211ENST00000541427 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
KNTC1-211ENST00000541427 SPSB2Q99619 263 aa9.66□□□□□ -0.86
KNTC1-211ENST00000541427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.65□□□□□ -0.86
KNTC1-211ENST00000541427 WFS1O76024 890 aa9.65□□□□□ -0.86
KNTC1-211ENST00000541427 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
KNTC1-211ENST00000541427 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
KNTC1-211ENST00000541427 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
KNTC1-211ENST00000541427 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
KNTC1-211ENST00000541427 SEMA3EO15041 775 aa9.63□□□□□ -0.87
KNTC1-211ENST00000541427 AXIN1O15169 862 aa9.63□□□□□ -0.87
KNTC1-211ENST00000541427 AVPP01185 164 aa9.63□□□□□ -0.87
KNTC1-211ENST00000541427 RPIAP49247 311 aa9.63□□□□□ -0.87
KNTC1-211ENST00000541427 CYP4X1Q8N118 509 aa9.62□□□□□ -0.87
KNTC1-211ENST00000541427 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
KNTC1-211ENST00000541427 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
KNTC1-211ENST00000541427 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
KNTC1-211ENST00000541427 BCANQ96GW7 911 aa9.6□□□□□ -0.87
KNTC1-211ENST00000541427 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
KNTC1-211ENST00000541427 PXYLP1Q8TE99 480 aa9.59□□□□□ -0.87
KNTC1-211ENST00000541427 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
KNTC1-211ENST00000541427 FCHSD2O94868 740 aa9.58□□□□□ -0.88
KNTC1-211ENST00000541427 OATP04181 439 aa9.58□□□□□ -0.88
KNTC1-211ENST00000541427 NFX1Q12986 1120 aaKnown RBP9.58□□□□□ -0.88
KNTC1-211ENST00000541427 STK17AQ9UEE5 414 aa9.58□□□□□ -0.88
KNTC1-211ENST00000541427 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
KNTC1-211ENST00000541427 TTC24A2A3L6 582 aaPredicted RBP9.55□□□□□ -0.88
KNTC1-211ENST00000541427 WIPF1O43516 503 aa9.55□□□□□ -0.88
KNTC1-211ENST00000541427 MORN1Q5T089 497 aa9.55□□□□□ -0.88
KNTC1-211ENST00000541427 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
KNTC1-211ENST00000541427 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
KNTC1-211ENST00000541427 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
KNTC1-211ENST00000541427 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
KNTC1-211ENST00000541427 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
KNTC1-211ENST00000541427 FUT2Q10981 343 aa9.52□□□□□ -0.89
KNTC1-211ENST00000541427 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
KNTC1-211ENST00000541427 ATP6V1AP38606 617 aa9.51□□□□□ -0.89
KNTC1-211ENST00000541427 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
KNTC1-211ENST00000541427 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
KNTC1-211ENST00000541427 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
KNTC1-211ENST00000541427 SNRPBP14678 240 aaKnown RBP9.49□□□□□ -0.89
KNTC1-211ENST00000541427 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
KNTC1-211ENST00000541427 SMPD1P17405 629 aa9.48□□□□□ -0.89
KNTC1-211ENST00000541427 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms