RNA–Protein interactions for RNA: ENST00000541087.1

MDM1-212, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-212ENST00000541087 FOXD1Q16676 465 aa15.27■□□□□ 0.04
MDM1-212ENST00000541087 KANK1Q14678 1352 aa15.24■□□□□ 0.03
MDM1-212ENST00000541087 AFF2P51816 1311 aa15.24■□□□□ 0.03
MDM1-212ENST00000541087 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
MDM1-212ENST00000541087 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
MDM1-212ENST00000541087 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
MDM1-212ENST00000541087 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
MDM1-212ENST00000541087 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
MDM1-212ENST00000541087 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
MDM1-212ENST00000541087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
MDM1-212ENST00000541087 ADGRB3O60242 1522 aa15.22■□□□□ 0.03
MDM1-212ENST00000541087 ATF3P18847 181 aa15.22■□□□□ 0.03
MDM1-212ENST00000541087 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
MDM1-212ENST00000541087 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
MDM1-212ENST00000541087 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.2■□□□□ 0.02
MDM1-212ENST00000541087 RGS12O14924 1447 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
MDM1-212ENST00000541087 C19orf44Q9H6X5 657 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 PLEKHG1Q9ULL1 1385 aa15.2■□□□□ 0.02
MDM1-212ENST00000541087 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
MDM1-212ENST00000541087 MYOM3Q5VTT5 1437 aa15.19■□□□□ 0.02
MDM1-212ENST00000541087 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
MDM1-212ENST00000541087 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
MDM1-212ENST00000541087 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
MDM1-212ENST00000541087 NOS1P29475 1434 aa15.17■□□□□ 0.02
MDM1-212ENST00000541087 PPP1R15AO75807 674 aaPredicted RBP15.17■□□□□ 0.02
MDM1-212ENST00000541087 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
MDM1-212ENST00000541087 NGLY1Q96IV0 654 aa15.16■□□□□ 0.02
MDM1-212ENST00000541087 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
MDM1-212ENST00000541087 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
MDM1-212ENST00000541087 ZFYVE9O95405 1425 aa15.15■□□□□ 0.02
MDM1-212ENST00000541087 SETD5Q9C0A6 1442 aa15.15■□□□□ 0.02
MDM1-212ENST00000541087 MYO5BQ9ULV0 1848 aa15.15■□□□□ 0.02
MDM1-212ENST00000541087 LRRC59Q96AG4 307 aaKnown RBP15.14■□□□□ 0.01
MDM1-212ENST00000541087 C8orf37Q96NL8 207 aa15.14■□□□□ 0.01
MDM1-212ENST00000541087 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
MDM1-212ENST00000541087 RIMS2Q9UQ26 1411 aa15.13■□□□□ 0.01
MDM1-212ENST00000541087 PIK3R4Q99570 1358 aa15.12■□□□□ 0.01
MDM1-212ENST00000541087 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
MDM1-212ENST00000541087 NHSL1Q5SYE7 1610 aa15.1■□□□□ 0.01
MDM1-212ENST00000541087 DCCP43146 1447 aa15.1■□□□□ 0.01
MDM1-212ENST00000541087 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
MDM1-212ENST00000541087 ASXL1Q8IXJ9 1541 aa15.1■□□□□ 0.01
MDM1-212ENST00000541087 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
MDM1-212ENST00000541087 ABCC5O15440 1437 aa15.09■□□□□ 0.01
MDM1-212ENST00000541087 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0.01
MDM1-212ENST00000541087 CCDC125Q86Z20 511 aa15.08■□□□□ 0
MDM1-212ENST00000541087 ADAMTS13Q76LX8 1427 aa15.08■□□□□ 0
MDM1-212ENST00000541087 EP400Q96L91 3159 aa15.08■□□□□ 0
MDM1-212ENST00000541087 TMEM131LA2VDJ0 1609 aa15.07■□□□□ 0
MDM1-212ENST00000541087 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
MDM1-212ENST00000541087 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
MDM1-212ENST00000541087 TRPM2O94759 1503 aa15.06■□□□□ 0
MDM1-212ENST00000541087 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
MDM1-212ENST00000541087 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
MDM1-212ENST00000541087 DAPK1P53355 1430 aa15.04■□□□□ -0
MDM1-212ENST00000541087 MST1RQ04912 1400 aa15.04■□□□□ -0
MDM1-212ENST00000541087 USP21Q9UK80 565 aa15.04■□□□□ -0
MDM1-212ENST00000541087 ADAMTS2O95450 1211 aa15.03■□□□□ -0
MDM1-212ENST00000541087 CHGAP10645 457 aaKnown RBP15.03■□□□□ -0
MDM1-212ENST00000541087 PTPN23Q9H3S7 1636 aa15.03■□□□□ -0
MDM1-212ENST00000541087 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
MDM1-212ENST00000541087 PTPRUQ92729 1446 aa15□□□□□ -0.01
MDM1-212ENST00000541087 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
MDM1-212ENST00000541087 FNBP4Q8N3X1 1017 aaPredicted RBP14.99□□□□□ -0.01
MDM1-212ENST00000541087 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
MDM1-212ENST00000541087 ATRNO75882 1429 aa14.98□□□□□ -0.01
MDM1-212ENST00000541087 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
MDM1-212ENST00000541087 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
MDM1-212ENST00000541087 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
MDM1-212ENST00000541087 UNC13BO14795 1591 aa14.97□□□□□ -0.01
MDM1-212ENST00000541087 LRP5O75197 1615 aa14.95□□□□□ -0.02
MDM1-212ENST00000541087 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
MDM1-212ENST00000541087 LAMC1P11047 1609 aa14.94□□□□□ -0.02
MDM1-212ENST00000541087 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
MDM1-212ENST00000541087 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
MDM1-212ENST00000541087 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
MDM1-212ENST00000541087 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
MDM1-212ENST00000541087 C1orf167Q5SNV9 1468 aa14.91□□□□□ -0.02
MDM1-212ENST00000541087 NALCNQ8IZF0 1738 aa14.91□□□□□ -0.02
MDM1-212ENST00000541087 SF3B2Q13435 895 aaKnown RBP14.9□□□□□ -0.02
MDM1-212ENST00000541087 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
MDM1-212ENST00000541087 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
MDM1-212ENST00000541087 NRXN3Q9Y4C0 1643 aa14.9□□□□□ -0.02
MDM1-212ENST00000541087 E9PCH4 1651 aa14.9□□□□□ -0.02
MDM1-212ENST00000541087 MARF1Q9Y4F3 1742 aaKnown RBP14.89□□□□□ -0.03
MDM1-212ENST00000541087 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
MDM1-212ENST00000541087 DEFB132Q7Z7B7 95 aa14.87□□□□□ -0.03
MDM1-212ENST00000541087 METP08581 1390 aa14.86□□□□□ -0.03
MDM1-212ENST00000541087 IQGAP3Q86VI3 1631 aa14.86□□□□□ -0.03
MDM1-212ENST00000541087 ORAI2Q96SN7 254 aa14.86□□□□□ -0.03
MDM1-212ENST00000541087 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.86□□□□□ -0.03
MDM1-212ENST00000541087 MYOM2P54296 1465 aa14.85□□□□□ -0.03
MDM1-212ENST00000541087 APLP2Q06481 763 aa14.85□□□□□ -0.03
MDM1-212ENST00000541087 SPHKAPQ2M3C7 1700 aa14.85□□□□□ -0.03
MDM1-212ENST00000541087 BRWD3Q6RI45 1802 aa14.83□□□□□ -0.04
MDM1-212ENST00000541087 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms