RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 NPHP1O15259 732 aa12.2□□□□□ -0.46
TTC39C-203ENST00000540918 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
TTC39C-203ENST00000540918 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
TTC39C-203ENST00000540918 ZBED9Q6R2W3 1325 aa12.19□□□□□ -0.46
TTC39C-203ENST00000540918 AKNAQ7Z591 1439 aa12.19□□□□□ -0.46
TTC39C-203ENST00000540918 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
TTC39C-203ENST00000540918 RRS1Q15050 365 aaKnown RBP12.19□□□□□ -0.46
TTC39C-203ENST00000540918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
TTC39C-203ENST00000540918 FANCAO15360 1455 aa12.18□□□□□ -0.46
TTC39C-203ENST00000540918 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
TTC39C-203ENST00000540918 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
TTC39C-203ENST00000540918 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
TTC39C-203ENST00000540918 TRAPPC8Q9Y2L5 1435 aa12.17□□□□□ -0.46
TTC39C-203ENST00000540918 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
TTC39C-203ENST00000540918 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
TTC39C-203ENST00000540918 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
TTC39C-203ENST00000540918 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
TTC39C-203ENST00000540918 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
TTC39C-203ENST00000540918 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
TTC39C-203ENST00000540918 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
TTC39C-203ENST00000540918 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
TTC39C-203ENST00000540918 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
TTC39C-203ENST00000540918 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
TTC39C-203ENST00000540918 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
TTC39C-203ENST00000540918 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
TTC39C-203ENST00000540918 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
TTC39C-203ENST00000540918 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
TTC39C-203ENST00000540918 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
TTC39C-203ENST00000540918 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
TTC39C-203ENST00000540918 KIF14Q15058 1648 aa12.13□□□□□ -0.47
TTC39C-203ENST00000540918 THUMPD2Q9BTF0 503 aaKnown RBP12.13□□□□□ -0.47
TTC39C-203ENST00000540918 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
TTC39C-203ENST00000540918 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
TTC39C-203ENST00000540918 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
TTC39C-203ENST00000540918 BCAR3O75815 825 aa12.12□□□□□ -0.47
TTC39C-203ENST00000540918 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
TTC39C-203ENST00000540918 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 E9PSI1 815 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 ATF3P18847 181 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 EVA1CP58658 441 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 MS4A1P11836 297 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
TTC39C-203ENST00000540918 RUNDC1Q96C34 613 aa12.11□□□□□ -0.47
TTC39C-203ENST00000540918 SLKQ9H2G2 1235 aaPredicted RBP12.11□□□□□ -0.47
TTC39C-203ENST00000540918 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
TTC39C-203ENST00000540918 TEFQ10587 303 aa12.1□□□□□ -0.47
TTC39C-203ENST00000540918 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
TTC39C-203ENST00000540918 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
TTC39C-203ENST00000540918 SULT6B1Q6IMI4 303 aa12.1□□□□□ -0.47
TTC39C-203ENST00000540918 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
TTC39C-203ENST00000540918 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
TTC39C-203ENST00000540918 KCNJ4P48050 445 aa12.09□□□□□ -0.47
TTC39C-203ENST00000540918 ZC3H6P61129 1189 aaKnown RBP12.09□□□□□ -0.47
TTC39C-203ENST00000540918 NME9Q86XW9 330 aa12.09□□□□□ -0.47
TTC39C-203ENST00000540918 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
TTC39C-203ENST00000540918 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
TTC39C-203ENST00000540918 NOS1P29475 1434 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 KIAA0556O60303 1618 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 BECN1Q14457 450 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 NUDT16Q96DE0 195 aaKnown RBP12.08□□□□□ -0.48
TTC39C-203ENST00000540918 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 PLCH2O75038 1416 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
TTC39C-203ENST00000540918 FOXO3O43524 673 aa12.07□□□□□ -0.48
TTC39C-203ENST00000540918 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
TTC39C-203ENST00000540918 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
TTC39C-203ENST00000540918 NOP58Q9Y2X3 529 aaKnown RBP12.07□□□□□ -0.48
TTC39C-203ENST00000540918 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
TTC39C-203ENST00000540918 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
TTC39C-203ENST00000540918 DISP3Q9P2K9 1392 aa12.07□□□□□ -0.48
TTC39C-203ENST00000540918 NOL8Q76FK4 1167 aaKnown RBP12.07□□□□□ -0.48
TTC39C-203ENST00000540918 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
TTC39C-203ENST00000540918 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
TTC39C-203ENST00000540918 C1orf141Q5JVX7 400 aa12.06□□□□□ -0.48
TTC39C-203ENST00000540918 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
TTC39C-203ENST00000540918 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
TTC39C-203ENST00000540918 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
TTC39C-203ENST00000540918 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
TTC39C-203ENST00000540918 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 EMILIN1Q9Y6C2 1016 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
TTC39C-203ENST00000540918 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 TSPYL4Q9UJ04 414 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 WDR62O43379 1518 aa12.05□□□□□ -0.48
TTC39C-203ENST00000540918 NUP160Q12769 1436 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 BRD4O60885 1362 aaPredicted RBP12.04□□□□□ -0.48
TTC39C-203ENST00000540918 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
TTC39C-203ENST00000540918 CASC1Q6TDU7 716 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 NSD3Q9BZ95 1437 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
TTC39C-203ENST00000540918 FGD1P98174 961 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms