RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 MAST1Q9Y2H9 1570 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 SOX12O15370 315 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 BCL11BQ9C0K0 894 aaPredicted RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 ZNF777Q9ULD5 760 aaPredicted RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 MYO5CQ9NQX4 1742 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 RPRD2Q5VT52 1461 aaKnown RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 KIAA1107Q9UPP5 1409 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 SAMD9LQ8IVG5 1584 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMO3-224ENST00000540848 PZPP20742 1482 aa14.39□□□□□ -0.11
LMO3-224ENST00000540848 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
LMO3-224ENST00000540848 TTC37Q6PGP7 1564 aa14.38□□□□□ -0.11
LMO3-224ENST00000540848 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
LMO3-224ENST00000540848 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
LMO3-224ENST00000540848 SNPHO15079 494 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 PLXNC1O60486 1568 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 PLCH2O75038 1416 aa14.33□□□□□ -0.11
LMO3-224ENST00000540848 TEX14Q8IWB6 1497 aa14.33□□□□□ -0.12
LMO3-224ENST00000540848 G3V3G9 751 aa14.32□□□□□ -0.12
LMO3-224ENST00000540848 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
LMO3-224ENST00000540848 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
LMO3-224ENST00000540848 STK25O00506 426 aa14.31□□□□□ -0.12
LMO3-224ENST00000540848 MFRPQ9BY79 579 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
LMO3-224ENST00000540848 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
LMO3-224ENST00000540848 UNC13BO14795 1591 aa14.29□□□□□ -0.12
LMO3-224ENST00000540848 NUP155O75694 1391 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 ABCC1P33527 1531 aa14.27□□□□□ -0.12
LMO3-224ENST00000540848 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
LMO3-224ENST00000540848 WDR7Q9Y4E6 1490 aa14.27□□□□□ -0.13
LMO3-224ENST00000540848 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.13
LMO3-224ENST00000540848 NLRP6P59044 892 aa14.26□□□□□ -0.13
LMO3-224ENST00000540848 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
LMO3-224ENST00000540848 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
LMO3-224ENST00000540848 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 RTEL1-TNFRSF6BF6WH68 1400 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
LMO3-224ENST00000540848 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 IQGAP3Q86VI3 1631 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 MAGI2Q86UL8 1455 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
LMO3-224ENST00000540848 UHRF1BP1Q6BDS2 1440 aa14.21□□□□□ -0.13
LMO3-224ENST00000540848 KCNH8Q96L42 1107 aa14.21□□□□□ -0.14
LMO3-224ENST00000540848 POLR1AO95602 1720 aaPredicted RBP14.2□□□□□ -0.14
LMO3-224ENST00000540848 ANP32CO43423 234 aa14.2□□□□□ -0.14
LMO3-224ENST00000540848 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
LMO3-224ENST00000540848 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
LMO3-224ENST00000540848 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
LMO3-224ENST00000540848 ATP10AO60312 1499 aa14.17□□□□□ -0.14
LMO3-224ENST00000540848 SPATA31E1Q6ZUB1 1445 aa14.17□□□□□ -0.14
LMO3-224ENST00000540848 RALGAPBQ86X10 1494 aa14.16□□□□□ -0.14
LMO3-224ENST00000540848 CFAP74Q9C0B2 1584 aa14.16□□□□□ -0.14
LMO3-224ENST00000540848 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 EMP3P54852 163 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 FANCAO15360 1455 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
LMO3-224ENST00000540848 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
LMO3-224ENST00000540848 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
LMO3-224ENST00000540848 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
LMO3-224ENST00000540848 CCDC144AA2RUR9 1427 aa14.13□□□□□ -0.15
LMO3-224ENST00000540848 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 EIF2AK4Q9P2K8 1649 aaKnown RBP14.12□□□□□ -0.15
LMO3-224ENST00000540848 CNTLNQ9NXG0 1405 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 DEPDC5O75140 1603 aa14.11□□□□□ -0.15
LMO3-224ENST00000540848 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
LMO3-224ENST00000540848 KDM5CP41229 1560 aa14.1□□□□□ -0.15
LMO3-224ENST00000540848 PPP1R37O75864 691 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
LMO3-224ENST00000540848 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HS3ST6Q96QI5 342 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 USP47Q96K76 1375 aa14.08□□□□□ -0.16
LMO3-224ENST00000540848 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
LMO3-224ENST00000540848 LAMC1P11047 1609 aa14.07□□□□□ -0.16
LMO3-224ENST00000540848 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
LMO3-224ENST00000540848 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
LMO3-224ENST00000540848 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
LMO3-224ENST00000540848 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms