RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
PHC1-209ENST00000540809 ARHGAP35Q9NRY4 1499 aa12.49□□□□□ -0.41
PHC1-209ENST00000540809 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
PHC1-209ENST00000540809 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
PHC1-209ENST00000540809 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
PHC1-209ENST00000540809 PLCH2O75038 1416 aa12.47□□□□□ -0.41
PHC1-209ENST00000540809 SIGLEC1Q9BZZ2 1709 aa12.47□□□□□ -0.41
PHC1-209ENST00000540809 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
PHC1-209ENST00000540809 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
PHC1-209ENST00000540809 DSG2Q14126 1118 aa12.45□□□□□ -0.42
PHC1-209ENST00000540809 MLECQ14165 292 aa12.45□□□□□ -0.42
PHC1-209ENST00000540809 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
PHC1-209ENST00000540809 EFCAB2Q5VUJ9 269 aa12.44□□□□□ -0.42
PHC1-209ENST00000540809 FMN1Q68DA7 1419 aa12.44□□□□□ -0.42
PHC1-209ENST00000540809 ARHGEF40Q8TER5 1519 aa12.43□□□□□ -0.42
PHC1-209ENST00000540809 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
PHC1-209ENST00000540809 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
PHC1-209ENST00000540809 HSPA2P54652 639 aa12.42□□□□□ -0.42
PHC1-209ENST00000540809 AFAP1Q8N556 730 aa12.42□□□□□ -0.42
PHC1-209ENST00000540809 RNF166Q96A37 237 aaPredicted RBP12.42□□□□□ -0.42
PHC1-209ENST00000540809 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
PHC1-209ENST00000540809 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
PHC1-209ENST00000540809 RIMS1Q86UR5 1692 aaKnown RBP12.42□□□□□ -0.42
PHC1-209ENST00000540809 LMTK3Q96Q04 1460 aa12.41□□□□□ -0.42
PHC1-209ENST00000540809 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
PHC1-209ENST00000540809 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
PHC1-209ENST00000540809 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
PHC1-209ENST00000540809 ZFYVE16Q7Z3T8 1539 aa12.41□□□□□ -0.42
PHC1-209ENST00000540809 KIF14Q15058 1648 aa12.4□□□□□ -0.42
PHC1-209ENST00000540809 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
PHC1-209ENST00000540809 POGZQ7Z3K3 1410 aa12.4□□□□□ -0.42
PHC1-209ENST00000540809 PBX2P40425 430 aa12.39□□□□□ -0.43
PHC1-209ENST00000540809 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
PHC1-209ENST00000540809 CRISPLD2Q9H0B8 497 aa12.39□□□□□ -0.43
PHC1-209ENST00000540809 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
PHC1-209ENST00000540809 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
PHC1-209ENST00000540809 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
PHC1-209ENST00000540809 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
PHC1-209ENST00000540809 ATP10AO60312 1499 aa12.38□□□□□ -0.43
PHC1-209ENST00000540809 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
PHC1-209ENST00000540809 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
PHC1-209ENST00000540809 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
PHC1-209ENST00000540809 PTGER2P43116 358 aa12.36□□□□□ -0.43
PHC1-209ENST00000540809 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
PHC1-209ENST00000540809 ARHGAP5Q13017 1502 aa12.34□□□□□ -0.43
PHC1-209ENST00000540809 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
PHC1-209ENST00000540809 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
PHC1-209ENST00000540809 ARHGEF12Q9NZN5 1544 aa12.33□□□□□ -0.44
PHC1-209ENST00000540809 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
PHC1-209ENST00000540809 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
PHC1-209ENST00000540809 CLIP1P30622 1438 aa12.32□□□□□ -0.44
PHC1-209ENST00000540809 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
PHC1-209ENST00000540809 TRAPPC8Q9Y2L5 1435 aa12.32□□□□□ -0.44
PHC1-209ENST00000540809 FER1L4A9Z1Z3 1794 aa12.31□□□□□ -0.44
PHC1-209ENST00000540809 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
PHC1-209ENST00000540809 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
PHC1-209ENST00000540809 KDM5CP41229 1560 aa12.3□□□□□ -0.44
PHC1-209ENST00000540809 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
PHC1-209ENST00000540809 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
PHC1-209ENST00000540809 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
PHC1-209ENST00000540809 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
PHC1-209ENST00000540809 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
PHC1-209ENST00000540809 TBC1D12O60347 775 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 CCDC18Q5T9S5 1454 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
PHC1-209ENST00000540809 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
PHC1-209ENST00000540809 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
PHC1-209ENST00000540809 ABCC1P33527 1531 aa12.25□□□□□ -0.45
PHC1-209ENST00000540809 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
PHC1-209ENST00000540809 PSEN2P49810 448 aa12.24□□□□□ -0.45
PHC1-209ENST00000540809 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
PHC1-209ENST00000540809 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
PHC1-209ENST00000540809 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
PHC1-209ENST00000540809 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
PHC1-209ENST00000540809 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
PHC1-209ENST00000540809 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 HRO43593 1189 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 PDE4AP27815 886 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
PHC1-209ENST00000540809 STRCQ7RTU9 1775 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
PHC1-209ENST00000540809 AGLP35573 1532 aa12.21□□□□□ -0.45
PHC1-209ENST00000540809 ZNF644Q9H582 1327 aaPredicted RBP12.21□□□□□ -0.45
PHC1-209ENST00000540809 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
PHC1-209ENST00000540809 CFDP1Q9UEE9 299 aaPredicted RBP12.21□□□□□ -0.45
PHC1-209ENST00000540809 C3P01024 1663 aa12.2□□□□□ -0.46
PHC1-209ENST00000540809 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
PHC1-209ENST00000540809 TK2O00142 265 aa12.2□□□□□ -0.46
PHC1-209ENST00000540809 MFSD10Q14728 455 aa12.2□□□□□ -0.46
PHC1-209ENST00000540809 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
PHC1-209ENST00000540809 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
PHC1-209ENST00000540809 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
PHC1-209ENST00000540809 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
PHC1-209ENST00000540809 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
PHC1-209ENST00000540809 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
PHC1-209ENST00000540809 CCNB3Q8WWL7 1395 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms