RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 STAC3Q96MF2 364 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 IQGAP1P46940 1657 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
NPC1-202ENST00000540608 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
NPC1-202ENST00000540608 CLTCL1P53675 1640 aa16.15■□□□□ 0.18
NPC1-202ENST00000540608 PTPRTO14522 1441 aa16.15■□□□□ 0.18
NPC1-202ENST00000540608 CEP152O94986 1710 aa16.15■□□□□ 0.18
NPC1-202ENST00000540608 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
NPC1-202ENST00000540608 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 FANCAO15360 1455 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
NPC1-202ENST00000540608 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
NPC1-202ENST00000540608 KDM2BQ8NHM5 1336 aa16.13■□□□□ 0.17
NPC1-202ENST00000540608 ABCA9Q8IUA7 1624 aa16.13■□□□□ 0.17
NPC1-202ENST00000540608 SYNMO15061 1565 aa16.13■□□□□ 0.17
NPC1-202ENST00000540608 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
NPC1-202ENST00000540608 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
NPC1-202ENST00000540608 SCAF11Q99590 1463 aaKnown RBP16.12■□□□□ 0.17
NPC1-202ENST00000540608 TET3O43151 1660 aa16.12■□□□□ 0.17
NPC1-202ENST00000540608 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
NPC1-202ENST00000540608 ASXL1Q8IXJ9 1541 aa16.11■□□□□ 0.17
NPC1-202ENST00000540608 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
NPC1-202ENST00000540608 CENPQQ7L2Z9 268 aaPredicted RBP16.11■□□□□ 0.17
NPC1-202ENST00000540608 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
NPC1-202ENST00000540608 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
NPC1-202ENST00000540608 VWDEQ8N2E2 1590 aa16.11■□□□□ 0.17
NPC1-202ENST00000540608 KIF3BO15066 747 aa16.1■□□□□ 0.17
NPC1-202ENST00000540608 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
NPC1-202ENST00000540608 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
NPC1-202ENST00000540608 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
NPC1-202ENST00000540608 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
NPC1-202ENST00000540608 KANK1Q14678 1352 aa16.08■□□□□ 0.17
NPC1-202ENST00000540608 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
NPC1-202ENST00000540608 NEFMP07197 916 aa16.08■□□□□ 0.16
NPC1-202ENST00000540608 TRMT2AQ8IZ69 625 aaKnown RBP16.08■□□□□ 0.16
NPC1-202ENST00000540608 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
NPC1-202ENST00000540608 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
NPC1-202ENST00000540608 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
NPC1-202ENST00000540608 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
NPC1-202ENST00000540608 MYOM1P52179 1685 aa16.05■□□□□ 0.16
NPC1-202ENST00000540608 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
NPC1-202ENST00000540608 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
NPC1-202ENST00000540608 ASXL2Q76L83 1435 aa16.04■□□□□ 0.16
NPC1-202ENST00000540608 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
NPC1-202ENST00000540608 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
NPC1-202ENST00000540608 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.15
NPC1-202ENST00000540608 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.15
NPC1-202ENST00000540608 ADGRF5Q8IZF2 1346 aa16.01■□□□□ 0.15
NPC1-202ENST00000540608 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
NPC1-202ENST00000540608 KIDINS220Q9ULH0 1771 aa16.01■□□□□ 0.15
NPC1-202ENST00000540608 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
NPC1-202ENST00000540608 ABCA6Q8N139 1617 aa16■□□□□ 0.15
NPC1-202ENST00000540608 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
NPC1-202ENST00000540608 APAF1O14727 1248 aa16■□□□□ 0.15
NPC1-202ENST00000540608 NGEFQ8N5V2 710 aa16■□□□□ 0.15
NPC1-202ENST00000540608 EFCAB6Q5THR3 1501 aa16■□□□□ 0.15
NPC1-202ENST00000540608 C8orf34Q49A92 452 aa15.99■□□□□ 0.15
NPC1-202ENST00000540608 MYOM2P54296 1465 aa15.99■□□□□ 0.15
NPC1-202ENST00000540608 E9PSI1 815 aa15.99■□□□□ 0.15
NPC1-202ENST00000540608 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
NPC1-202ENST00000540608 PPRC1Q5VV67 1664 aaKnown RBP15.99■□□□□ 0.15
NPC1-202ENST00000540608 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
NPC1-202ENST00000540608 KIF1BO60333 1816 aa15.98■□□□□ 0.15
NPC1-202ENST00000540608 NPM1P06748 294 aaKnown RBP eCLIP15.98■□□□□ 0.15
NPC1-202ENST00000540608 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
NPC1-202ENST00000540608 IFT172Q9UG01 1749 aa15.96■□□□□ 0.15
NPC1-202ENST00000540608 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
NPC1-202ENST00000540608 BCAR3O75815 825 aa15.95■□□□□ 0.14
NPC1-202ENST00000540608 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
NPC1-202ENST00000540608 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
NPC1-202ENST00000540608 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
NPC1-202ENST00000540608 LMTK2Q8IWU2 1503 aa15.93■□□□□ 0.14
NPC1-202ENST00000540608 NRXN1Q9ULB1 1477 aa15.93■□□□□ 0.14
NPC1-202ENST00000540608 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
NPC1-202ENST00000540608 PDE3AQ14432 1141 aa15.92■□□□□ 0.14
NPC1-202ENST00000540608 NFKBIBQ15653 356 aa15.92■□□□□ 0.14
NPC1-202ENST00000540608 POLR3AO14802 1390 aaPredicted RBP15.92■□□□□ 0.14
NPC1-202ENST00000540608 RGS3P49796 1198 aa15.92■□□□□ 0.14
NPC1-202ENST00000540608 NOS1P29475 1434 aa15.92■□□□□ 0.14
NPC1-202ENST00000540608 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
NPC1-202ENST00000540608 SBNO2Q9Y2G9 1366 aa15.91■□□□□ 0.14
NPC1-202ENST00000540608 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
NPC1-202ENST00000540608 ADGRB3O60242 1522 aa15.91■□□□□ 0.14
NPC1-202ENST00000540608 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
NPC1-202ENST00000540608 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
NPC1-202ENST00000540608 FRMPD1Q5SYB0 1578 aa15.9■□□□□ 0.14
NPC1-202ENST00000540608 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
NPC1-202ENST00000540608 NPATQ14207 1427 aa15.89■□□□□ 0.13
NPC1-202ENST00000540608 IGHDP01880 384 aa15.89■□□□□ 0.13
NPC1-202ENST00000540608 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
NPC1-202ENST00000540608 POGZQ7Z3K3 1410 aa15.89■□□□□ 0.13
NPC1-202ENST00000540608 CENPJQ9HC77 1338 aaPredicted RBP15.89■□□□□ 0.13
NPC1-202ENST00000540608 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms