RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 COL16A1Q07092 1604 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
TRAPPC1-202ENST00000540486 NUTM2BA6NNL0 878 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 NUTM2EB1AL46 878 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 NUTM2DQ5VT03 806 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 NUTM2AQ8IVF1 878 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
TRAPPC1-202ENST00000540486 AFF2P51816 1311 aa14.16□□□□□ -0.14
TRAPPC1-202ENST00000540486 CAPN15O75808 1086 aa14.16□□□□□ -0.14
TRAPPC1-202ENST00000540486 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-202ENST00000540486 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC1-202ENST00000540486 TIAM1Q13009 1591 aa14.14□□□□□ -0.15
TRAPPC1-202ENST00000540486 NCOA3Q9Y6Q9 1424 aa14.14□□□□□ -0.15
TRAPPC1-202ENST00000540486 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
TRAPPC1-202ENST00000540486 NGLY1Q96IV0 654 aa14.13□□□□□ -0.15
TRAPPC1-202ENST00000540486 RGS12O14924 1447 aa14.13□□□□□ -0.15
TRAPPC1-202ENST00000540486 TET3O43151 1660 aa14.13□□□□□ -0.15
TRAPPC1-202ENST00000540486 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
TRAPPC1-202ENST00000540486 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
TRAPPC1-202ENST00000540486 CCDC125Q86Z20 511 aa14.12□□□□□ -0.15
TRAPPC1-202ENST00000540486 ARHGAP31Q2M1Z3 1444 aa14.12□□□□□ -0.15
TRAPPC1-202ENST00000540486 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
TRAPPC1-202ENST00000540486 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
TRAPPC1-202ENST00000540486 AHDC1Q5TGY3 1603 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC1-202ENST00000540486 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
TRAPPC1-202ENST00000540486 CEP162Q5TB80 1403 aa14.08□□□□□ -0.15
TRAPPC1-202ENST00000540486 ATF3P18847 181 aa14.08□□□□□ -0.16
TRAPPC1-202ENST00000540486 BCANQ96GW7 911 aa14.08□□□□□ -0.16
TRAPPC1-202ENST00000540486 C19orf44Q9H6X5 657 aa14.08□□□□□ -0.16
TRAPPC1-202ENST00000540486 IDI1Q13907 227 aa14.07□□□□□ -0.16
TRAPPC1-202ENST00000540486 C14orf37Q86TY3 774 aa14.07□□□□□ -0.16
TRAPPC1-202ENST00000540486 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
TRAPPC1-202ENST00000540486 EFCAB6Q5THR3 1501 aa14.06□□□□□ -0.16
TRAPPC1-202ENST00000540486 CFAP65Q6ZU64 1925 aaKnown RBP14.06□□□□□ -0.16
TRAPPC1-202ENST00000540486 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
TRAPPC1-202ENST00000540486 KDM5AP29375 1690 aaKnown RBP14.05□□□□□ -0.16
TRAPPC1-202ENST00000540486 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
TRAPPC1-202ENST00000540486 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
TRAPPC1-202ENST00000540486 PIK3C2BO00750 1634 aa14.04□□□□□ -0.16
TRAPPC1-202ENST00000540486 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
TRAPPC1-202ENST00000540486 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
TRAPPC1-202ENST00000540486 HDGFP51858 240 aaKnown RBP14.03□□□□□ -0.16
TRAPPC1-202ENST00000540486 EHBP1L1Q8N3D4 1523 aa14.03□□□□□ -0.16
TRAPPC1-202ENST00000540486 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
TRAPPC1-202ENST00000540486 MROH1Q8NDA8 1641 aa14.03□□□□□ -0.16
TRAPPC1-202ENST00000540486 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
TRAPPC1-202ENST00000540486 DSG3P32926 999 aa14□□□□□ -0.17
TRAPPC1-202ENST00000540486 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
TRAPPC1-202ENST00000540486 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
TRAPPC1-202ENST00000540486 CEP152O94986 1710 aa14□□□□□ -0.17
TRAPPC1-202ENST00000540486 PLEKHG1Q9ULL1 1385 aa13.99□□□□□ -0.17
TRAPPC1-202ENST00000540486 MAST1Q9Y2H9 1570 aa13.98□□□□□ -0.17
TRAPPC1-202ENST00000540486 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
TRAPPC1-202ENST00000540486 USP21Q9UK80 565 aa13.97□□□□□ -0.17
TRAPPC1-202ENST00000540486 KANK1Q14678 1352 aa13.96□□□□□ -0.17
TRAPPC1-202ENST00000540486 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC1-202ENST00000540486 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.18
TRAPPC1-202ENST00000540486 PIK3R4Q99570 1358 aa13.96□□□□□ -0.18
TRAPPC1-202ENST00000540486 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC1-202ENST00000540486 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
TRAPPC1-202ENST00000540486 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC1-202ENST00000540486 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
TRAPPC1-202ENST00000540486 DCCP43146 1447 aa13.94□□□□□ -0.18
TRAPPC1-202ENST00000540486 EP400Q96L91 3159 aa13.94□□□□□ -0.18
TRAPPC1-202ENST00000540486 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC1-202ENST00000540486 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
TRAPPC1-202ENST00000540486 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
TRAPPC1-202ENST00000540486 NOS1P29475 1434 aa13.92□□□□□ -0.18
TRAPPC1-202ENST00000540486 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
TRAPPC1-202ENST00000540486 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
TRAPPC1-202ENST00000540486 LRP5O75197 1615 aa13.91□□□□□ -0.18
TRAPPC1-202ENST00000540486 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC1-202ENST00000540486 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
TRAPPC1-202ENST00000540486 ATRNO75882 1429 aa13.9□□□□□ -0.19
TRAPPC1-202ENST00000540486 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
TRAPPC1-202ENST00000540486 KIF15Q9NS87 1388 aa13.89□□□□□ -0.19
TRAPPC1-202ENST00000540486 LMTK2Q8IWU2 1503 aa13.89□□□□□ -0.19
TRAPPC1-202ENST00000540486 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
TRAPPC1-202ENST00000540486 POLA2Q14181 598 aa13.88□□□□□ -0.19
TRAPPC1-202ENST00000540486 MST1RQ04912 1400 aa13.88□□□□□ -0.19
TRAPPC1-202ENST00000540486 PTCH1Q13635 1447 aa13.88□□□□□ -0.19
TRAPPC1-202ENST00000540486 RRP7BPQ9NSQ0 103 aa13.87□□□□□ -0.19
TRAPPC1-202ENST00000540486 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
TRAPPC1-202ENST00000540486 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 ABCB7O75027 752 aa13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 DEFB132Q7Z7B7 95 aa13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 GJD4Q96KN9 370 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 MYOM3Q5VTT5 1437 aa13.86□□□□□ -0.19
TRAPPC1-202ENST00000540486 HRCP23327 699 aa13.85□□□□□ -0.19
TRAPPC1-202ENST00000540486 YY1P25490 414 aa13.84□□□□□ -0.19
TRAPPC1-202ENST00000540486 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
TRAPPC1-202ENST00000540486 SOS2Q07890 1332 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC1-202ENST00000540486 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms