RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
GABARAPL1-208ENST00000540424 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
GABARAPL1-208ENST00000540424 TESK2Q96S53 571 aa20.12■□□□□ 0.81
GABARAPL1-208ENST00000540424 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
GABARAPL1-208ENST00000540424 CEP152O94986 1710 aa20.12■□□□□ 0.81
GABARAPL1-208ENST00000540424 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
GABARAPL1-208ENST00000540424 PARD3Q8TEW0 1356 aa20.11■□□□□ 0.81
GABARAPL1-208ENST00000540424 NLRP13Q86W25 1043 aa20.11■□□□□ 0.81
GABARAPL1-208ENST00000540424 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
GABARAPL1-208ENST00000540424 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
GABARAPL1-208ENST00000540424 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
GABARAPL1-208ENST00000540424 GSE1Q14687 1217 aa20.09■□□□□ 0.81
GABARAPL1-208ENST00000540424 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
GABARAPL1-208ENST00000540424 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.81
GABARAPL1-208ENST00000540424 KIF3BO15066 747 aa20.08■□□□□ 0.8
GABARAPL1-208ENST00000540424 DIP2BQ9P265 1576 aa20.07■□□□□ 0.8
GABARAPL1-208ENST00000540424 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
GABARAPL1-208ENST00000540424 CDCA8Q53HL2 280 aa20.07■□□□□ 0.8
GABARAPL1-208ENST00000540424 CLTCL1P53675 1640 aa20.06■□□□□ 0.8
GABARAPL1-208ENST00000540424 KIF13AQ9H1H9 1805 aa20.05■□□□□ 0.8
GABARAPL1-208ENST00000540424 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
GABARAPL1-208ENST00000540424 CFAP74Q9C0B2 1584 aa20.05■□□□□ 0.8
GABARAPL1-208ENST00000540424 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
GABARAPL1-208ENST00000540424 GLI2P10070 1586 aa20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 FAM43AQ8N2R8 423 aa20.03■□□□□ 0.8
GABARAPL1-208ENST00000540424 GLIPR1L2Q4G1C9 344 aa20.02■□□□□ 0.8
GABARAPL1-208ENST00000540424 INSRP06213 1382 aa20.02■□□□□ 0.8
GABARAPL1-208ENST00000540424 PANK3Q9H999 370 aa20.02■□□□□ 0.79
GABARAPL1-208ENST00000540424 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
GABARAPL1-208ENST00000540424 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
GABARAPL1-208ENST00000540424 ZMYM4Q5VZL5 1548 aa20■□□□□ 0.79
GABARAPL1-208ENST00000540424 MROH1Q8NDA8 1641 aa20■□□□□ 0.79
GABARAPL1-208ENST00000540424 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
GABARAPL1-208ENST00000540424 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
GABARAPL1-208ENST00000540424 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
GABARAPL1-208ENST00000540424 KIDINS220Q9ULH0 1771 aa19.98■□□□□ 0.79
GABARAPL1-208ENST00000540424 MYOM2P54296 1465 aa19.98■□□□□ 0.79
GABARAPL1-208ENST00000540424 PDE3BQ13370 1112 aa19.97■□□□□ 0.79
GABARAPL1-208ENST00000540424 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
GABARAPL1-208ENST00000540424 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
GABARAPL1-208ENST00000540424 MAP3K4Q9Y6R4 1608 aa19.95■□□□□ 0.78
GABARAPL1-208ENST00000540424 CC2D1BQ5T0F9 858 aaKnown RBP19.95■□□□□ 0.78
GABARAPL1-208ENST00000540424 MS4A1P11836 297 aa19.94■□□□□ 0.78
GABARAPL1-208ENST00000540424 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
GABARAPL1-208ENST00000540424 SYNMO15061 1565 aa19.94■□□□□ 0.78
GABARAPL1-208ENST00000540424 POGZQ7Z3K3 1410 aa19.94■□□□□ 0.78
GABARAPL1-208ENST00000540424 MLH3Q9UHC1 1453 aa19.94■□□□□ 0.78
GABARAPL1-208ENST00000540424 PDE4AP27815 886 aa19.93■□□□□ 0.78
GABARAPL1-208ENST00000540424 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
GABARAPL1-208ENST00000540424 KIF1BO60333 1816 aa19.93■□□□□ 0.78
GABARAPL1-208ENST00000540424 BACH2Q9BYV9 841 aa19.92■□□□□ 0.78
GABARAPL1-208ENST00000540424 FRAT1Q92837 279 aaPredicted RBP19.92■□□□□ 0.78
GABARAPL1-208ENST00000540424 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
GABARAPL1-208ENST00000540424 NFKBIBQ15653 356 aa19.9■□□□□ 0.78
GABARAPL1-208ENST00000540424 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.78
GABARAPL1-208ENST00000540424 BLMP54132 1417 aaPredicted RBP19.89■□□□□ 0.77
GABARAPL1-208ENST00000540424 TSPOAP1O95153 1857 aa19.88■□□□□ 0.77
GABARAPL1-208ENST00000540424 NPC1L1Q9UHC9 1359 aa19.87■□□□□ 0.77
GABARAPL1-208ENST00000540424 NEO1Q92859 1461 aa19.87■□□□□ 0.77
GABARAPL1-208ENST00000540424 UGGT1Q9NYU2 1555 aa19.86■□□□□ 0.77
GABARAPL1-208ENST00000540424 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
GABARAPL1-208ENST00000540424 NRXN1Q9ULB1 1477 aa19.86■□□□□ 0.77
GABARAPL1-208ENST00000540424 ABCA6Q8N139 1617 aa19.86■□□□□ 0.77
GABARAPL1-208ENST00000540424 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
GABARAPL1-208ENST00000540424 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
GABARAPL1-208ENST00000540424 ADGRB3O60242 1522 aa19.84■□□□□ 0.77
GABARAPL1-208ENST00000540424 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
GABARAPL1-208ENST00000540424 ADGRF5Q8IZF2 1346 aa19.83■□□□□ 0.77
GABARAPL1-208ENST00000540424 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.76
GABARAPL1-208ENST00000540424 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.76
GABARAPL1-208ENST00000540424 ZMYND15Q9H091 742 aa19.82■□□□□ 0.76
GABARAPL1-208ENST00000540424 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
GABARAPL1-208ENST00000540424 SETBP1Q9Y6X0 1596 aa19.82■□□□□ 0.76
GABARAPL1-208ENST00000540424 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
GABARAPL1-208ENST00000540424 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
GABARAPL1-208ENST00000540424 SBNO2Q9Y2G9 1366 aa19.81■□□□□ 0.76
GABARAPL1-208ENST00000540424 NPATQ14207 1427 aa19.81■□□□□ 0.76
GABARAPL1-208ENST00000540424 MROH2AA6NES4 1674 aa19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 SENP3-EIF4A1A0A087X0R7 540 aa19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 WDR43Q15061 677 aaKnown RBP eCLIP19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 PIK3C2GO75747 1445 aa19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 GGT6Q6P531 493 aa19.8■□□□□ 0.76
GABARAPL1-208ENST00000540424 MYOM1P52179 1685 aa19.79■□□□□ 0.76
GABARAPL1-208ENST00000540424 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
GABARAPL1-208ENST00000540424 NOS1P29475 1434 aa19.78■□□□□ 0.76
GABARAPL1-208ENST00000540424 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
GABARAPL1-208ENST00000540424 ABCC3O15438 1527 aa19.77■□□□□ 0.76
GABARAPL1-208ENST00000540424 ERVK-7P63135 1459 aa19.77■□□□□ 0.76
GABARAPL1-208ENST00000540424 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
GABARAPL1-208ENST00000540424 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
GABARAPL1-208ENST00000540424 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
GABARAPL1-208ENST00000540424 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
GABARAPL1-208ENST00000540424 PPLO60437 1756 aa19.73■□□□□ 0.75
GABARAPL1-208ENST00000540424 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
GABARAPL1-208ENST00000540424 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms