RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
CPT1A-206ENST00000540367 ARHGAP5Q13017 1502 aa14.64□□□□□ -0.07
CPT1A-206ENST00000540367 SLC4A3P48751 1232 aa14.64□□□□□ -0.07
CPT1A-206ENST00000540367 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
CPT1A-206ENST00000540367 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.63□□□□□ -0.07
CPT1A-206ENST00000540367 ATP10AO60312 1499 aa14.63□□□□□ -0.07
CPT1A-206ENST00000540367 MAGI2Q86UL8 1455 aa14.63□□□□□ -0.07
CPT1A-206ENST00000540367 BRPF3Q9ULD4 1205 aa14.63□□□□□ -0.07
CPT1A-206ENST00000540367 PLXNC1O60486 1568 aa14.62□□□□□ -0.07
CPT1A-206ENST00000540367 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
CPT1A-206ENST00000540367 ABCC2Q92887 1545 aa14.62□□□□□ -0.07
CPT1A-206ENST00000540367 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
CPT1A-206ENST00000540367 VIRMAQ69YN4 1812 aaKnown RBP14.61□□□□□ -0.07
CPT1A-206ENST00000540367 PPP2R1AP30153 589 aa14.61□□□□□ -0.07
CPT1A-206ENST00000540367 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
CPT1A-206ENST00000540367 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
CPT1A-206ENST00000540367 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
CPT1A-206ENST00000540367 SYNMO15061 1565 aa14.6□□□□□ -0.07
CPT1A-206ENST00000540367 AFAP1Q8N556 730 aa14.59□□□□□ -0.07
CPT1A-206ENST00000540367 EIF3AQ14152 1382 aaKnown RBP14.59□□□□□ -0.07
CPT1A-206ENST00000540367 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.07
CPT1A-206ENST00000540367 PIK3C2GO75747 1445 aa14.58□□□□□ -0.07
CPT1A-206ENST00000540367 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
CPT1A-206ENST00000540367 SLFN5Q08AF3 891 aa14.57□□□□□ -0.08
CPT1A-206ENST00000540367 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
CPT1A-206ENST00000540367 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
CPT1A-206ENST00000540367 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
CPT1A-206ENST00000540367 TRMT2AQ8IZ69 625 aaKnown RBP14.56□□□□□ -0.08
CPT1A-206ENST00000540367 DUOX2Q9NRD8 1548 aa14.55□□□□□ -0.08
CPT1A-206ENST00000540367 RGS3P49796 1198 aa14.55□□□□□ -0.08
CPT1A-206ENST00000540367 NKTRP30414 1462 aaKnown RBP14.55□□□□□ -0.08
CPT1A-206ENST00000540367 MYOM1P52179 1685 aa14.55□□□□□ -0.08
CPT1A-206ENST00000540367 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
CPT1A-206ENST00000540367 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
CPT1A-206ENST00000540367 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
CPT1A-206ENST00000540367 NPC1L1Q9UHC9 1359 aa14.54□□□□□ -0.08
CPT1A-206ENST00000540367 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
CPT1A-206ENST00000540367 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
CPT1A-206ENST00000540367 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
CPT1A-206ENST00000540367 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
CPT1A-206ENST00000540367 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
CPT1A-206ENST00000540367 SPHKAPQ2M3C7 1700 aa14.53□□□□□ -0.08
CPT1A-206ENST00000540367 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
CPT1A-206ENST00000540367 EFCAB2Q5VUJ9 269 aa14.5□□□□□ -0.09
CPT1A-206ENST00000540367 PLCH2O75038 1416 aa14.5□□□□□ -0.09
CPT1A-206ENST00000540367 SCAPERQ9BY12 1400 aa14.5□□□□□ -0.09
CPT1A-206ENST00000540367 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
CPT1A-206ENST00000540367 USP19O94966 1318 aa14.49□□□□□ -0.09
CPT1A-206ENST00000540367 E9PSI1 815 aa14.49□□□□□ -0.09
CPT1A-206ENST00000540367 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
CPT1A-206ENST00000540367 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
CPT1A-206ENST00000540367 CEP152O94986 1710 aa14.48□□□□□ -0.09
CPT1A-206ENST00000540367 NINLQ9Y2I6 1382 aa14.48□□□□□ -0.09
CPT1A-206ENST00000540367 BCAR3O75815 825 aa14.48□□□□□ -0.09
CPT1A-206ENST00000540367 CGNL1Q0VF96 1302 aa14.47□□□□□ -0.09
CPT1A-206ENST00000540367 TRPM2O94759 1503 aa14.47□□□□□ -0.09
CPT1A-206ENST00000540367 APAF1O14727 1248 aa14.47□□□□□ -0.09
CPT1A-206ENST00000540367 IGHDP01880 384 aa14.47□□□□□ -0.09
CPT1A-206ENST00000540367 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
CPT1A-206ENST00000540367 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
CPT1A-206ENST00000540367 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
CPT1A-206ENST00000540367 UBE2Q2Q8WVN8 375 aa14.46□□□□□ -0.09
CPT1A-206ENST00000540367 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.1
CPT1A-206ENST00000540367 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
CPT1A-206ENST00000540367 KIAA1210Q9ULL0 1709 aa14.45□□□□□ -0.1
CPT1A-206ENST00000540367 STAC3Q96MF2 364 aa14.44□□□□□ -0.1
CPT1A-206ENST00000540367 SPAG9O60271 1321 aaKnown RBP14.44□□□□□ -0.1
CPT1A-206ENST00000540367 BECN1Q14457 450 aa14.43□□□□□ -0.1
CPT1A-206ENST00000540367 CLUAP1Q96AJ1 413 aa14.43□□□□□ -0.1
CPT1A-206ENST00000540367 UHRF1BP1LA0JNW5 1464 aa14.43□□□□□ -0.1
CPT1A-206ENST00000540367 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
CPT1A-206ENST00000540367 CLTCL1P53675 1640 aa14.43□□□□□ -0.1
CPT1A-206ENST00000540367 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
CPT1A-206ENST00000540367 ABCC1P33527 1531 aa14.42□□□□□ -0.1
CPT1A-206ENST00000540367 CENPJQ9HC77 1338 aaPredicted RBP14.42□□□□□ -0.1
CPT1A-206ENST00000540367 SEC24BO95487 1268 aa14.41□□□□□ -0.1
CPT1A-206ENST00000540367 PTPRTO14522 1441 aa14.41□□□□□ -0.1
CPT1A-206ENST00000540367 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
CPT1A-206ENST00000540367 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
CPT1A-206ENST00000540367 POGKQ9P215 609 aa14.4□□□□□ -0.1
CPT1A-206ENST00000540367 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
CPT1A-206ENST00000540367 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
CPT1A-206ENST00000540367 ERVK-7P63135 1459 aa14.39□□□□□ -0.11
CPT1A-206ENST00000540367 FANCAO15360 1455 aa14.38□□□□□ -0.11
CPT1A-206ENST00000540367 KIF3BO15066 747 aa14.38□□□□□ -0.11
CPT1A-206ENST00000540367 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
CPT1A-206ENST00000540367 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
CPT1A-206ENST00000540367 AAMPQ13685 434 aa14.38□□□□□ -0.11
CPT1A-206ENST00000540367 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
CPT1A-206ENST00000540367 DEPDC5O75140 1603 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 TET3O43151 1660 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 WWC1Q8IX03 1113 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 PMFBP1Q8TBY8 1022 aa14.37□□□□□ -0.11
CPT1A-206ENST00000540367 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
CPT1A-206ENST00000540367 ABCA6Q8N139 1617 aa14.35□□□□□ -0.11
CPT1A-206ENST00000540367 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
CPT1A-206ENST00000540367 MAP3K4Q9Y6R4 1608 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms