RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 CNTLNQ9NXG0 1405 aa8.12□□□□□ -1.11
RTL9-203ENST00000540313 HMMRO75330 724 aa8.12□□□□□ -1.11
RTL9-203ENST00000540313 WDR62O43379 1518 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 TEX14Q8IWB6 1497 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 DDX49Q9Y6V7 483 aaKnown RBP8.11□□□□□ -1.11
RTL9-203ENST00000540313 MIA2Q96PC5 1412 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 PPP6R1Q9UPN7 881 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 CCDC7Q96M83 1385 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
RTL9-203ENST00000540313 KIAA0586Q9BVV6 1533 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 FYCO1Q9BQS8 1478 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
RTL9-203ENST00000540313 TXNDC2Q86VQ3 553 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 TPM4P67936 248 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
RTL9-203ENST00000540313 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
RTL9-203ENST00000540313 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 RRP7AQ9Y3A4 280 aaKnown RBP8.09□□□□□ -1.11
RTL9-203ENST00000540313 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 KIF21BO75037 1637 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
RTL9-203ENST00000540313 AKNAQ7Z591 1439 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 HECW1Q76N89 1606 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 CHMP5Q9NZZ3 219 aa8.09□□□□□ -1.11
RTL9-203ENST00000540313 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 SLC52A1Q9NWF4 448 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 ISY1Q9ULR0 285 aaKnown RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 KIF7Q2M1P5 1343 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 TNNT3P45378 269 aaPredicted RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
RTL9-203ENST00000540313 ERICH3Q5RHP9 1530 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 BCL2L13Q9BXK5 485 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 PLB1Q6P1J6 1458 aa8.08□□□□□ -1.12
RTL9-203ENST00000540313 WWC1Q8IX03 1113 aa8.07□□□□□ -1.12
RTL9-203ENST00000540313 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
RTL9-203ENST00000540313 ANKRD45Q5TZF3 282 aa8.07□□□□□ -1.12
RTL9-203ENST00000540313 CD109Q6YHK3 1445 aa8.07□□□□□ -1.12
RTL9-203ENST00000540313 RAPGEF4Q8WZA2 1011 aa8.06□□□□□ -1.12
RTL9-203ENST00000540313 NOL10Q9BSC4 688 aaKnown RBP8.06□□□□□ -1.12
RTL9-203ENST00000540313 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
RTL9-203ENST00000540313 APAF1O14727 1248 aa8.06□□□□□ -1.12
RTL9-203ENST00000540313 ZNF608Q9ULD9 1512 aaPredicted RBP8.06□□□□□ -1.12
RTL9-203ENST00000540313 SMG6Q86US8 1419 aaKnown RBP8.06□□□□□ -1.12
RTL9-203ENST00000540313 KIF16BQ96L93 1317 aa8.06□□□□□ -1.12
RTL9-203ENST00000540313 SLC4A10Q6U841 1118 aa8.06□□□□□ -1.12
RTL9-203ENST00000540313 CUL7Q14999 1698 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 TEFQ10587 303 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.12
RTL9-203ENST00000540313 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 LTV1Q96GA3 475 aaPredicted RBP8.05□□□□□ -1.12
RTL9-203ENST00000540313 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
RTL9-203ENST00000540313 FGD6Q6ZV73 1430 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 RPGRIP1LQ68CZ1 1315 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 DDX19BQ9UMR2 479 aa8.05□□□□□ -1.12
RTL9-203ENST00000540313 FAM43AQ8N2R8 423 aa8.04□□□□□ -1.12
RTL9-203ENST00000540313 FRAT2O75474 233 aaPredicted RBP8.04□□□□□ -1.12
RTL9-203ENST00000540313 EHBP1L1Q8N3D4 1523 aa8.04□□□□□ -1.12
RTL9-203ENST00000540313 TRIM34Q9BYJ4 488 aa8.04□□□□□ -1.12
RTL9-203ENST00000540313 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
RTL9-203ENST00000540313 ATP6V1DQ9Y5K8 247 aa8.04□□□□□ -1.12
RTL9-203ENST00000540313 BRD4O60885 1362 aaPredicted RBP8.03□□□□□ -1.12
RTL9-203ENST00000540313 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 NUTM2FA1L443 756 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 GOLGA6L1Q8N7Z2 621 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 TROQ12816 1431 aaPredicted RBP8.03□□□□□ -1.12
RTL9-203ENST00000540313 CHMP3Q9Y3E7 222 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 LRRC9Q6ZRR7 1453 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 MRE11P49959 708 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
RTL9-203ENST00000540313 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 LRPPRCP42704 1394 aaKnown RBP8.03□□□□□ -1.12
RTL9-203ENST00000540313 NEXNQ0ZGT2 675 aa8.03□□□□□ -1.12
RTL9-203ENST00000540313 BIVM-ERCC5R4GMW8 1640 aa8.02□□□□□ -1.12
RTL9-203ENST00000540313 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
RTL9-203ENST00000540313 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 DDX58O95786 925 aaKnown RBP8.02□□□□□ -1.13
RTL9-203ENST00000540313 AAMPQ13685 434 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 C22orf23Q9BZE7 217 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 ROCK1Q13464 1354 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 KLHL34Q8N239 644 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 IQGAP2Q13576 1575 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 ESCO1Q5FWF5 840 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 RILPL2Q969X0 211 aa8.02□□□□□ -1.13
RTL9-203ENST00000540313 THOC2Q8NI27 1593 aaKnown RBP8.01□□□□□ -1.13
RTL9-203ENST00000540313 REC8O95072 547 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 SYTL4Q96C24 671 aaPredicted RBP8.01□□□□□ -1.13
RTL9-203ENST00000540313 CCDC34Q96HJ3 373 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
RTL9-203ENST00000540313 ANKRD50Q9ULJ7 1429 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms