RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
CDH19-203ENST00000540086 RPGRIP1LQ68CZ1 1315 aa9.72□□□□□ -0.85
CDH19-203ENST00000540086 TNRQ92752 1358 aa9.72□□□□□ -0.85
CDH19-203ENST00000540086 MYOM2P54296 1465 aa9.72□□□□□ -0.85
CDH19-203ENST00000540086 MADDQ8WXG6 1647 aa9.71□□□□□ -0.86
CDH19-203ENST00000540086 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
CDH19-203ENST00000540086 KIF1BO60333 1816 aa9.7□□□□□ -0.86
CDH19-203ENST00000540086 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
CDH19-203ENST00000540086 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
CDH19-203ENST00000540086 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
CDH19-203ENST00000540086 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
CDH19-203ENST00000540086 ST20-MTHFSA0A0A6YYL1 179 aa9.68□□□□□ -0.86
CDH19-203ENST00000540086 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
CDH19-203ENST00000540086 DDX10Q13206 875 aaKnown RBP9.68□□□□□ -0.86
CDH19-203ENST00000540086 TMEM131LA2VDJ0 1609 aa9.68□□□□□ -0.86
CDH19-203ENST00000540086 NEXMIFQ5QGS0 1516 aa9.68□□□□□ -0.86
CDH19-203ENST00000540086 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
CDH19-203ENST00000540086 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
CDH19-203ENST00000540086 WASHC2AQ641Q2 1341 aa9.67□□□□□ -0.86
CDH19-203ENST00000540086 PIK3C2GO75747 1445 aa9.67□□□□□ -0.86
CDH19-203ENST00000540086 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
CDH19-203ENST00000540086 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.86
CDH19-203ENST00000540086 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
CDH19-203ENST00000540086 RIMS2Q9UQ26 1411 aa9.65□□□□□ -0.86
CDH19-203ENST00000540086 C14orf93Q9H972 538 aaKnown RBP9.65□□□□□ -0.86
CDH19-203ENST00000540086 CCDC7Q96M83 1385 aa9.65□□□□□ -0.86
CDH19-203ENST00000540086 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.87
CDH19-203ENST00000540086 ZFYVE9O95405 1425 aa9.65□□□□□ -0.87
CDH19-203ENST00000540086 PPLO60437 1756 aa9.65□□□□□ -0.87
CDH19-203ENST00000540086 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
CDH19-203ENST00000540086 SCAF11Q99590 1463 aaKnown RBP9.64□□□□□ -0.87
CDH19-203ENST00000540086 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
CDH19-203ENST00000540086 C3P01024 1663 aa9.64□□□□□ -0.87
CDH19-203ENST00000540086 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
CDH19-203ENST00000540086 LAMC1P11047 1609 aa9.63□□□□□ -0.87
CDH19-203ENST00000540086 RIMS1Q86UR5 1692 aaKnown RBP9.63□□□□□ -0.87
CDH19-203ENST00000540086 MIER1Q8N108 512 aa9.63□□□□□ -0.87
CDH19-203ENST00000540086 TESK2Q96S53 571 aa9.63□□□□□ -0.87
CDH19-203ENST00000540086 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
CDH19-203ENST00000540086 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
CDH19-203ENST00000540086 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDH19-203ENST00000540086 MYO5BQ9ULV0 1848 aa9.61□□□□□ -0.87
CDH19-203ENST00000540086 EIF3AQ14152 1382 aaKnown RBP9.61□□□□□ -0.87
CDH19-203ENST00000540086 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
CDH19-203ENST00000540086 ADGRB1O14514 1584 aa9.61□□□□□ -0.87
CDH19-203ENST00000540086 KIAA1210Q9ULL0 1709 aa9.61□□□□□ -0.87
CDH19-203ENST00000540086 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
CDH19-203ENST00000540086 HDGFP51858 240 aaKnown RBP9.59□□□□□ -0.87
CDH19-203ENST00000540086 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
CDH19-203ENST00000540086 IQGAP1P46940 1657 aa9.59□□□□□ -0.87
CDH19-203ENST00000540086 LTKP29376 864 aa9.59□□□□□ -0.87
CDH19-203ENST00000540086 BCANQ96GW7 911 aa9.59□□□□□ -0.87
CDH19-203ENST00000540086 STK26Q9P289 416 aa9.59□□□□□ -0.87
CDH19-203ENST00000540086 UBR1Q8IWV7 1749 aa9.58□□□□□ -0.88
CDH19-203ENST00000540086 ASXL1Q8IXJ9 1541 aa9.58□□□□□ -0.88
CDH19-203ENST00000540086 TMF1P82094 1093 aa9.58□□□□□ -0.88
CDH19-203ENST00000540086 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
CDH19-203ENST00000540086 THEMISQ8N1K5 641 aaPredicted RBP9.58□□□□□ -0.88
CDH19-203ENST00000540086 PTPRMP28827 1452 aa9.58□□□□□ -0.88
CDH19-203ENST00000540086 MYO3AQ8NEV4 1616 aa9.57□□□□□ -0.88
CDH19-203ENST00000540086 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
CDH19-203ENST00000540086 ALKQ9UM73 1620 aa9.57□□□□□ -0.88
CDH19-203ENST00000540086 EID1Q9Y6B2 187 aa9.57□□□□□ -0.88
CDH19-203ENST00000540086 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
CDH19-203ENST00000540086 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
CDH19-203ENST00000540086 KDM5AP29375 1690 aaKnown RBP9.56□□□□□ -0.88
CDH19-203ENST00000540086 PLEKHG1Q9ULL1 1385 aa9.55□□□□□ -0.88
CDH19-203ENST00000540086 CEP170BQ9Y4F5 1589 aaPredicted RBP9.55□□□□□ -0.88
CDH19-203ENST00000540086 SLIT1O75093 1534 aa9.55□□□□□ -0.88
CDH19-203ENST00000540086 METP08581 1390 aa9.55□□□□□ -0.88
CDH19-203ENST00000540086 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH19-203ENST00000540086 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
CDH19-203ENST00000540086 ANP32CO43423 234 aa9.54□□□□□ -0.88
CDH19-203ENST00000540086 PRAM1Q96QH2 718 aa9.54□□□□□ -0.88
CDH19-203ENST00000540086 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
CDH19-203ENST00000540086 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
CDH19-203ENST00000540086 LRPPRCP42704 1394 aaKnown RBP9.53□□□□□ -0.88
CDH19-203ENST00000540086 SBNO2Q9Y2G9 1366 aa9.52□□□□□ -0.88
CDH19-203ENST00000540086 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
CDH19-203ENST00000540086 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
CDH19-203ENST00000540086 POGKQ9P215 609 aa9.52□□□□□ -0.89
CDH19-203ENST00000540086 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
CDH19-203ENST00000540086 CNGB1Q14028 1251 aaPredicted RBP9.51□□□□□ -0.89
CDH19-203ENST00000540086 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
CDH19-203ENST00000540086 ANKLE2Q86XL3 938 aa9.51□□□□□ -0.89
CDH19-203ENST00000540086 POLR1AO95602 1720 aaPredicted RBP9.51□□□□□ -0.89
CDH19-203ENST00000540086 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
CDH19-203ENST00000540086 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
CDH19-203ENST00000540086 MED14O60244 1454 aa9.5□□□□□ -0.89
CDH19-203ENST00000540086 PANK3Q9H999 370 aa9.5□□□□□ -0.89
CDH19-203ENST00000540086 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
CDH19-203ENST00000540086 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
CDH19-203ENST00000540086 ARHGEF28Q8N1W1 1705 aaKnown RBP9.49□□□□□ -0.89
CDH19-203ENST00000540086 TBX22Q9Y458 520 aa9.49□□□□□ -0.89
CDH19-203ENST00000540086 ZNF142P52746 1687 aaPredicted RBP9.49□□□□□ -0.89
CDH19-203ENST00000540086 DLC1Q96QB1 1528 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 QRICH2Q9H0J4 1663 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 PRKRIP1Q9H875 184 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms