RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CADPS2Q86UW7 1296 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 C19orf44Q9H6X5 657 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 UBR1Q8IWV7 1749 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
CPSF7-219ENST00000539952 MAST1Q9Y2H9 1570 aa9.3□□□□□ -0.92
CPSF7-219ENST00000539952 ATF3P18847 181 aa9.3□□□□□ -0.92
CPSF7-219ENST00000539952 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPSF7-219ENST00000539952 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
CPSF7-219ENST00000539952 KIF15Q9NS87 1388 aa9.29□□□□□ -0.92
CPSF7-219ENST00000539952 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-219ENST00000539952 C14orf37Q86TY3 774 aa9.29□□□□□ -0.92
CPSF7-219ENST00000539952 EIF2AK4Q9P2K8 1649 aaKnown RBP9.29□□□□□ -0.92
CPSF7-219ENST00000539952 PRDM15P57071 1507 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-219ENST00000539952 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-219ENST00000539952 TET3O43151 1660 aa9.28□□□□□ -0.92
CPSF7-219ENST00000539952 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
CPSF7-219ENST00000539952 ERBINQ96RT1 1412 aa9.28□□□□□ -0.92
CPSF7-219ENST00000539952 EFCAB6Q5THR3 1501 aa9.27□□□□□ -0.93
CPSF7-219ENST00000539952 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.93
CPSF7-219ENST00000539952 APLP2Q06481 763 aa9.27□□□□□ -0.93
CPSF7-219ENST00000539952 NKTRP30414 1462 aaKnown RBP9.27□□□□□ -0.93
CPSF7-219ENST00000539952 ROBO1Q9Y6N7 1651 aa9.26□□□□□ -0.93
CPSF7-219ENST00000539952 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-219ENST00000539952 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
CPSF7-219ENST00000539952 ANKRD30AQ9BXX3 1397 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 PLEKHG1Q9ULL1 1385 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 LRRC59Q96AG4 307 aaKnown RBP9.25□□□□□ -0.93
CPSF7-219ENST00000539952 RNF39Q9H2S5 420 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
CPSF7-219ENST00000539952 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
CPSF7-219ENST00000539952 ABCC5O15440 1437 aa9.24□□□□□ -0.93
CPSF7-219ENST00000539952 NOS1P29475 1434 aa9.24□□□□□ -0.93
CPSF7-219ENST00000539952 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-219ENST00000539952 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-219ENST00000539952 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
CPSF7-219ENST00000539952 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-219ENST00000539952 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-219ENST00000539952 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
CPSF7-219ENST00000539952 PIK3C2BO00750 1634 aa9.23□□□□□ -0.93
CPSF7-219ENST00000539952 LMTK2Q8IWU2 1503 aa9.23□□□□□ -0.93
CPSF7-219ENST00000539952 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
CPSF7-219ENST00000539952 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
CPSF7-219ENST00000539952 KDM5AP29375 1690 aaKnown RBP9.23□□□□□ -0.93
CPSF7-219ENST00000539952 CEP152O94986 1710 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 NGLY1Q96IV0 654 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 AFF2P51816 1311 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
CPSF7-219ENST00000539952 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.93
CPSF7-219ENST00000539952 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.94
CPSF7-219ENST00000539952 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-219ENST00000539952 NWD1Q149M9 1564 aa9.2□□□□□ -0.94
CPSF7-219ENST00000539952 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
CPSF7-219ENST00000539952 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
CPSF7-219ENST00000539952 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
CPSF7-219ENST00000539952 DAPK1P53355 1430 aa9.19□□□□□ -0.94
CPSF7-219ENST00000539952 RPRD2Q5VT52 1461 aaKnown RBP9.19□□□□□ -0.94
CPSF7-219ENST00000539952 LRP6O75581 1613 aa9.19□□□□□ -0.94
CPSF7-219ENST00000539952 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
CPSF7-219ENST00000539952 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
CPSF7-219ENST00000539952 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
CPSF7-219ENST00000539952 COL16A1Q07092 1604 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-219ENST00000539952 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
CPSF7-219ENST00000539952 ADGRB3O60242 1522 aa9.16□□□□□ -0.94
CPSF7-219ENST00000539952 AHDC1Q5TGY3 1603 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-219ENST00000539952 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
CPSF7-219ENST00000539952 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.94
CPSF7-219ENST00000539952 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
CPSF7-219ENST00000539952 TRPC5Q9UL62 973 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-219ENST00000539952 DCCP43146 1447 aa9.14□□□□□ -0.95
CPSF7-219ENST00000539952 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
CPSF7-219ENST00000539952 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
CPSF7-219ENST00000539952 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
CPSF7-219ENST00000539952 USP21Q9UK80 565 aa9.14□□□□□ -0.95
CPSF7-219ENST00000539952 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-219ENST00000539952 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-219ENST00000539952 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
CPSF7-219ENST00000539952 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-219ENST00000539952 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
CPSF7-219ENST00000539952 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
CPSF7-219ENST00000539952 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
CPSF7-219ENST00000539952 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
CPSF7-219ENST00000539952 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
CPSF7-219ENST00000539952 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
CPSF7-219ENST00000539952 SOS2Q07890 1332 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-219ENST00000539952 TMEM131LA2VDJ0 1609 aa9.1□□□□□ -0.95
CPSF7-219ENST00000539952 RGS12O14924 1447 aa9.1□□□□□ -0.95
CPSF7-219ENST00000539952 MST1RQ04912 1400 aa9.1□□□□□ -0.95
CPSF7-219ENST00000539952 DIP2AQ14689 1571 aa9.1□□□□□ -0.95
CPSF7-219ENST00000539952 TRPM2O94759 1503 aa9.1□□□□□ -0.95
CPSF7-219ENST00000539952 CAPN15O75808 1086 aa9.08□□□□□ -0.96
CPSF7-219ENST00000539952 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-219ENST00000539952 ORAI2Q96SN7 254 aa9.08□□□□□ -0.96
CPSF7-219ENST00000539952 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms