RNA–Protein interactions for RNA: ENST00000539859.1

LRTM2-203, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-203ENST00000539859 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
LRTM2-203ENST00000539859 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
LRTM2-203ENST00000539859 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
LRTM2-203ENST00000539859 TET3O43151 1660 aa23.34■■□□□ 1.33
LRTM2-203ENST00000539859 SHPRHQ149N8 1683 aa23.33■■□□□ 1.33
LRTM2-203ENST00000539859 BCANQ96GW7 911 aa23.33■■□□□ 1.33
LRTM2-203ENST00000539859 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
LRTM2-203ENST00000539859 DUOX2Q9NRD8 1548 aa23.3■■□□□ 1.32
LRTM2-203ENST00000539859 SRCAPQ6ZRS2 3230 aa23.29■■□□□ 1.32
LRTM2-203ENST00000539859 AHDC1Q5TGY3 1603 aaPredicted RBP23.27■■□□□ 1.32
LRTM2-203ENST00000539859 RRP7BPQ9NSQ0 103 aa23.27■■□□□ 1.32
LRTM2-203ENST00000539859 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
LRTM2-203ENST00000539859 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
LRTM2-203ENST00000539859 ITGAEP38570 1179 aa23.25■■□□□ 1.31
LRTM2-203ENST00000539859 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
LRTM2-203ENST00000539859 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
LRTM2-203ENST00000539859 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
LRTM2-203ENST00000539859 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
LRTM2-203ENST00000539859 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
LRTM2-203ENST00000539859 FOXD1Q16676 465 aa23.23■■□□□ 1.31
LRTM2-203ENST00000539859 AFF2P51816 1311 aa23.23■■□□□ 1.31
LRTM2-203ENST00000539859 KANK1Q14678 1352 aa23.23■■□□□ 1.31
LRTM2-203ENST00000539859 IDI1Q13907 227 aa23.22■■□□□ 1.31
LRTM2-203ENST00000539859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
LRTM2-203ENST00000539859 ANKRD30AQ9BXX3 1397 aa23.22■■□□□ 1.31
LRTM2-203ENST00000539859 RGS12O14924 1447 aa23.22■■□□□ 1.31
LRTM2-203ENST00000539859 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
LRTM2-203ENST00000539859 ERBINQ96RT1 1412 aa23.2■■□□□ 1.3
LRTM2-203ENST00000539859 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
LRTM2-203ENST00000539859 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
LRTM2-203ENST00000539859 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
LRTM2-203ENST00000539859 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
LRTM2-203ENST00000539859 ATF3P18847 181 aa23.18■■□□□ 1.3
LRTM2-203ENST00000539859 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
LRTM2-203ENST00000539859 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
LRTM2-203ENST00000539859 RBM6P78332 1123 aaKnown RBP23.15■■□□□ 1.3
LRTM2-203ENST00000539859 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
LRTM2-203ENST00000539859 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.3
LRTM2-203ENST00000539859 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.14■■□□□ 1.3
LRTM2-203ENST00000539859 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.29
LRTM2-203ENST00000539859 ATAD2Q6PL18 1390 aa23.14■■□□□ 1.29
LRTM2-203ENST00000539859 LMTK2Q8IWU2 1503 aa23.12■■□□□ 1.29
LRTM2-203ENST00000539859 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
LRTM2-203ENST00000539859 C19orf44Q9H6X5 657 aa23.11■■□□□ 1.29
LRTM2-203ENST00000539859 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
LRTM2-203ENST00000539859 NOS1P29475 1434 aa23.09■■□□□ 1.29
LRTM2-203ENST00000539859 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
LRTM2-203ENST00000539859 SLC52A1Q9NWF4 448 aa23.09■■□□□ 1.29
LRTM2-203ENST00000539859 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
LRTM2-203ENST00000539859 BRINP3Q76B58 766 aa23.08■■□□□ 1.29
LRTM2-203ENST00000539859 ZFYVE9O95405 1425 aa23.08■■□□□ 1.28
LRTM2-203ENST00000539859 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.28
LRTM2-203ENST00000539859 NGLY1Q96IV0 654 aa23.07■■□□□ 1.28
LRTM2-203ENST00000539859 RIMS2Q9UQ26 1411 aa23.07■■□□□ 1.28
LRTM2-203ENST00000539859 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
LRTM2-203ENST00000539859 SETBP1Q9Y6X0 1596 aa23.06■■□□□ 1.28
LRTM2-203ENST00000539859 ASXL1Q8IXJ9 1541 aa23.05■■□□□ 1.28
LRTM2-203ENST00000539859 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
LRTM2-203ENST00000539859 MYO5BQ9ULV0 1848 aa23.02■■□□□ 1.28
LRTM2-203ENST00000539859 GCC2Q8IWJ2 1684 aa23.02■■□□□ 1.28
LRTM2-203ENST00000539859 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
LRTM2-203ENST00000539859 NHSL1Q5SYE7 1610 aa23■■□□□ 1.27
LRTM2-203ENST00000539859 DCCP43146 1447 aa23■■□□□ 1.27
LRTM2-203ENST00000539859 PIK3R4Q99570 1358 aa23■■□□□ 1.27
LRTM2-203ENST00000539859 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
LRTM2-203ENST00000539859 PNPLA6Q8IY17 1366 aa22.97■■□□□ 1.27
LRTM2-203ENST00000539859 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
LRTM2-203ENST00000539859 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
LRTM2-203ENST00000539859 TRPM2O94759 1503 aa22.96■■□□□ 1.27
LRTM2-203ENST00000539859 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.26
LRTM2-203ENST00000539859 UNC13BO14795 1591 aa22.95■■□□□ 1.26
LRTM2-203ENST00000539859 NAIPQ13075 1403 aa22.94■■□□□ 1.26
LRTM2-203ENST00000539859 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
LRTM2-203ENST00000539859 MST1RQ04912 1400 aa22.92■■□□□ 1.26
LRTM2-203ENST00000539859 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
LRTM2-203ENST00000539859 TRPC5Q9UL62 973 aaPredicted RBP22.92■■□□□ 1.26
LRTM2-203ENST00000539859 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
LRTM2-203ENST00000539859 USP21Q9UK80 565 aa22.91■■□□□ 1.26
LRTM2-203ENST00000539859 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
LRTM2-203ENST00000539859 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
LRTM2-203ENST00000539859 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
LRTM2-203ENST00000539859 PTPRUQ92729 1446 aa22.85■■□□□ 1.25
LRTM2-203ENST00000539859 NUP155O75694 1391 aa22.85■■□□□ 1.25
LRTM2-203ENST00000539859 IQGAP3Q86VI3 1631 aa22.85■■□□□ 1.25
LRTM2-203ENST00000539859 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
LRTM2-203ENST00000539859 EP400Q96L91 3159 aa22.84■■□□□ 1.25
LRTM2-203ENST00000539859 ATRNO75882 1429 aa22.82■■□□□ 1.24
LRTM2-203ENST00000539859 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
LRTM2-203ENST00000539859 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
LRTM2-203ENST00000539859 LRP5O75197 1615 aa22.81■■□□□ 1.24
LRTM2-203ENST00000539859 ADGRL3Q9HAR2 1447 aa22.79■■□□□ 1.24
LRTM2-203ENST00000539859 E9PCH4 1651 aa22.78■■□□□ 1.24
LRTM2-203ENST00000539859 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
LRTM2-203ENST00000539859 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
LRTM2-203ENST00000539859 HRCP23327 699 aa22.74■■□□□ 1.23
LRTM2-203ENST00000539859 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
LRTM2-203ENST00000539859 C1orf167Q5SNV9 1468 aa22.73■■□□□ 1.23
LRTM2-203ENST00000539859 LAMC1P11047 1609 aa22.72■■□□□ 1.23
LRTM2-203ENST00000539859 SF3B2Q13435 895 aaKnown RBP22.72■■□□□ 1.23
LRTM2-203ENST00000539859 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms