RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
GNE-205ENST00000539815 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 C3P01024 1663 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
GNE-205ENST00000539815 FOXO3O43524 673 aa11.06□□□□□ -0.64
GNE-205ENST00000539815 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
GNE-205ENST00000539815 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
GNE-205ENST00000539815 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
GNE-205ENST00000539815 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
GNE-205ENST00000539815 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
GNE-205ENST00000539815 RIMS2Q9UQ26 1411 aa11.04□□□□□ -0.64
GNE-205ENST00000539815 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
GNE-205ENST00000539815 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
GNE-205ENST00000539815 PREX2Q70Z35 1606 aa11.02□□□□□ -0.64
GNE-205ENST00000539815 CFAP65Q6ZU64 1925 aaKnown RBP11.02□□□□□ -0.65
GNE-205ENST00000539815 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.65
GNE-205ENST00000539815 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
GNE-205ENST00000539815 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
GNE-205ENST00000539815 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
GNE-205ENST00000539815 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
GNE-205ENST00000539815 USP35Q9P2H5 1018 aa11□□□□□ -0.65
GNE-205ENST00000539815 DDX17Q92841 729 aaKnown RBP10.99□□□□□ -0.65
GNE-205ENST00000539815 PRDM11Q9NQV5 511 aa10.99□□□□□ -0.65
GNE-205ENST00000539815 RGS17Q9UGC6 210 aaPredicted RBP10.99□□□□□ -0.65
GNE-205ENST00000539815 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
GNE-205ENST00000539815 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
GNE-205ENST00000539815 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 EFCAB6Q5THR3 1501 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 KIDINS220Q9ULH0 1771 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 ITSN2Q9NZM3 1697 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
GNE-205ENST00000539815 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.65
GNE-205ENST00000539815 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
GNE-205ENST00000539815 GPRASP1Q5JY77 1395 aa10.96□□□□□ -0.65
GNE-205ENST00000539815 DNMT1P26358 1616 aaKnown RBP10.96□□□□□ -0.66
GNE-205ENST00000539815 KRT27Q7Z3Y8 459 aa10.95□□□□□ -0.66
GNE-205ENST00000539815 KRT28Q7Z3Y7 464 aa10.95□□□□□ -0.66
GNE-205ENST00000539815 FGD6Q6ZV73 1430 aa10.95□□□□□ -0.66
GNE-205ENST00000539815 PLEKHG1Q9ULL1 1385 aa10.94□□□□□ -0.66
GNE-205ENST00000539815 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
GNE-205ENST00000539815 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
GNE-205ENST00000539815 YY1P25490 414 aa10.94□□□□□ -0.66
GNE-205ENST00000539815 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
GNE-205ENST00000539815 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
GNE-205ENST00000539815 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
GNE-205ENST00000539815 ERBINQ96RT1 1412 aa10.93□□□□□ -0.66
GNE-205ENST00000539815 ADGBQ8N7X0 1667 aa10.93□□□□□ -0.66
GNE-205ENST00000539815 DEFB132Q7Z7B7 95 aa10.93□□□□□ -0.66
GNE-205ENST00000539815 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
GNE-205ENST00000539815 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
GNE-205ENST00000539815 CENPBP07199 599 aaPredicted RBP10.92□□□□□ -0.66
GNE-205ENST00000539815 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
GNE-205ENST00000539815 MED14O60244 1454 aa10.91□□□□□ -0.66
GNE-205ENST00000539815 RPRD2Q5VT52 1461 aaKnown RBP10.91□□□□□ -0.66
GNE-205ENST00000539815 UNC5CLQ8IV45 518 aa10.91□□□□□ -0.66
GNE-205ENST00000539815 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
GNE-205ENST00000539815 MROH2AA6NES4 1674 aa10.91□□□□□ -0.66
GNE-205ENST00000539815 ABCC3O15438 1527 aa10.9□□□□□ -0.66
GNE-205ENST00000539815 MSH5O43196 834 aa10.9□□□□□ -0.66
GNE-205ENST00000539815 APBA3O96018 575 aa10.9□□□□□ -0.66
GNE-205ENST00000539815 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
GNE-205ENST00000539815 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.66
GNE-205ENST00000539815 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
GNE-205ENST00000539815 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
GNE-205ENST00000539815 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
GNE-205ENST00000539815 KCNA4P22459 653 aa10.89□□□□□ -0.67
GNE-205ENST00000539815 DAPK1P53355 1430 aa10.88□□□□□ -0.67
GNE-205ENST00000539815 ARHGAP31Q2M1Z3 1444 aa10.88□□□□□ -0.67
GNE-205ENST00000539815 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
GNE-205ENST00000539815 RNF17Q9BXT8 1623 aaKnown RBP10.87□□□□□ -0.67
GNE-205ENST00000539815 IQGAP1P46940 1657 aa10.87□□□□□ -0.67
GNE-205ENST00000539815 ABCC5O15440 1437 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 CABLES1Q8TDN4 633 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 NCOA3Q9Y6Q9 1424 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 SOX12O15370 315 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 SPON1Q9HCB6 807 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
GNE-205ENST00000539815 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
GNE-205ENST00000539815 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
GNE-205ENST00000539815 BTG4Q9NY30 223 aa10.85□□□□□ -0.67
GNE-205ENST00000539815 INO80Q9ULG1 1556 aaPredicted RBP10.85□□□□□ -0.67
GNE-205ENST00000539815 SRPK2P78362 688 aaKnown RBP10.85□□□□□ -0.67
GNE-205ENST00000539815 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
GNE-205ENST00000539815 DHX57Q6P158 1386 aaKnown RBP10.84□□□□□ -0.67
GNE-205ENST00000539815 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
GNE-205ENST00000539815 ZC3H6P61129 1189 aaKnown RBP10.83□□□□□ -0.67
GNE-205ENST00000539815 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.67
GNE-205ENST00000539815 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.67
GNE-205ENST00000539815 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
GNE-205ENST00000539815 WAPLQ7Z5K2 1190 aa10.83□□□□□ -0.68
GNE-205ENST00000539815 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
GNE-205ENST00000539815 GPR162Q16538 588 aa10.83□□□□□ -0.68
GNE-205ENST00000539815 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms