RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
UBE3B-210ENST00000539599 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
UBE3B-210ENST00000539599 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
UBE3B-210ENST00000539599 ATP7AQ04656 1500 aa18.62■□□□□ 0.57
UBE3B-210ENST00000539599 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
UBE3B-210ENST00000539599 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
UBE3B-210ENST00000539599 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
UBE3B-210ENST00000539599 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
UBE3B-210ENST00000539599 PTPRTO14522 1441 aa18.61■□□□□ 0.57
UBE3B-210ENST00000539599 CEP152O94986 1710 aa18.6■□□□□ 0.57
UBE3B-210ENST00000539599 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
UBE3B-210ENST00000539599 ANP32AP39687 249 aaKnown RBP18.59■□□□□ 0.57
UBE3B-210ENST00000539599 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
UBE3B-210ENST00000539599 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.57
UBE3B-210ENST00000539599 GGT6Q6P531 493 aa18.58■□□□□ 0.56
UBE3B-210ENST00000539599 KANK1Q14678 1352 aa18.58■□□□□ 0.56
UBE3B-210ENST00000539599 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.56
UBE3B-210ENST00000539599 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.56
UBE3B-210ENST00000539599 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
UBE3B-210ENST00000539599 APAF1O14727 1248 aa18.57■□□□□ 0.56
UBE3B-210ENST00000539599 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
UBE3B-210ENST00000539599 PDE4AP27815 886 aa18.56■□□□□ 0.56
UBE3B-210ENST00000539599 IPO9Q96P70 1041 aaKnown RBP18.56■□□□□ 0.56
UBE3B-210ENST00000539599 MYOM1P52179 1685 aa18.56■□□□□ 0.56
UBE3B-210ENST00000539599 ASXL2Q76L83 1435 aa18.55■□□□□ 0.56
UBE3B-210ENST00000539599 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
UBE3B-210ENST00000539599 TET3O43151 1660 aa18.55■□□□□ 0.56
UBE3B-210ENST00000539599 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-210ENST00000539599 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
UBE3B-210ENST00000539599 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
UBE3B-210ENST00000539599 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
UBE3B-210ENST00000539599 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
UBE3B-210ENST00000539599 ABCA6Q8N139 1617 aa18.53■□□□□ 0.56
UBE3B-210ENST00000539599 ERVK-7P63135 1459 aa18.53■□□□□ 0.56
UBE3B-210ENST00000539599 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
UBE3B-210ENST00000539599 NOS1P29475 1434 aa18.52■□□□□ 0.55
UBE3B-210ENST00000539599 SYNMO15061 1565 aa18.52■□□□□ 0.55
UBE3B-210ENST00000539599 GOLGA2Q08379 1002 aa18.51■□□□□ 0.55
UBE3B-210ENST00000539599 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
UBE3B-210ENST00000539599 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-210ENST00000539599 BCAR3O75815 825 aa18.51■□□□□ 0.55
UBE3B-210ENST00000539599 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
UBE3B-210ENST00000539599 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
UBE3B-210ENST00000539599 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
UBE3B-210ENST00000539599 VWDEQ8N2E2 1590 aa18.5■□□□□ 0.55
UBE3B-210ENST00000539599 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
UBE3B-210ENST00000539599 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
UBE3B-210ENST00000539599 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
UBE3B-210ENST00000539599 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
UBE3B-210ENST00000539599 PPRC1Q5VV67 1664 aaKnown RBP18.49■□□□□ 0.55
UBE3B-210ENST00000539599 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
UBE3B-210ENST00000539599 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
UBE3B-210ENST00000539599 MAP3K4Q9Y6R4 1608 aa18.48■□□□□ 0.55
UBE3B-210ENST00000539599 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
UBE3B-210ENST00000539599 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
UBE3B-210ENST00000539599 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
UBE3B-210ENST00000539599 DEKP35659 375 aaKnown RBP18.47■□□□□ 0.55
UBE3B-210ENST00000539599 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
UBE3B-210ENST00000539599 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
UBE3B-210ENST00000539599 EFCAB6Q5THR3 1501 aa18.45■□□□□ 0.54
UBE3B-210ENST00000539599 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
UBE3B-210ENST00000539599 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
UBE3B-210ENST00000539599 CENPJQ9HC77 1338 aaPredicted RBP18.43■□□□□ 0.54
UBE3B-210ENST00000539599 RGS3P49796 1198 aa18.43■□□□□ 0.54
UBE3B-210ENST00000539599 KIF1BO60333 1816 aa18.43■□□□□ 0.54
UBE3B-210ENST00000539599 NPATQ14207 1427 aa18.42■□□□□ 0.54
UBE3B-210ENST00000539599 INSRP06213 1382 aa18.41■□□□□ 0.54
UBE3B-210ENST00000539599 NSD3Q9BZ95 1437 aa18.41■□□□□ 0.54
UBE3B-210ENST00000539599 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
UBE3B-210ENST00000539599 MYOM2P54296 1465 aa18.39■□□□□ 0.53
UBE3B-210ENST00000539599 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
UBE3B-210ENST00000539599 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
UBE3B-210ENST00000539599 TNNQ9UQP3 1299 aa18.38■□□□□ 0.53
UBE3B-210ENST00000539599 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
UBE3B-210ENST00000539599 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
UBE3B-210ENST00000539599 STK26Q9P289 416 aa18.37■□□□□ 0.53
UBE3B-210ENST00000539599 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
UBE3B-210ENST00000539599 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
UBE3B-210ENST00000539599 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
UBE3B-210ENST00000539599 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
UBE3B-210ENST00000539599 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
UBE3B-210ENST00000539599 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
UBE3B-210ENST00000539599 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
UBE3B-210ENST00000539599 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
UBE3B-210ENST00000539599 MS4A1P11836 297 aa18.35■□□□□ 0.53
UBE3B-210ENST00000539599 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-210ENST00000539599 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
UBE3B-210ENST00000539599 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
UBE3B-210ENST00000539599 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
UBE3B-210ENST00000539599 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
UBE3B-210ENST00000539599 MTHFSP49914 203 aa18.34■□□□□ 0.53
UBE3B-210ENST00000539599 COG6Q9Y2V7 657 aa18.34■□□□□ 0.53
UBE3B-210ENST00000539599 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.53
UBE3B-210ENST00000539599 IGHDP01880 384 aa18.33■□□□□ 0.53
UBE3B-210ENST00000539599 NRXN1Q9ULB1 1477 aa18.33■□□□□ 0.52
UBE3B-210ENST00000539599 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
UBE3B-210ENST00000539599 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-210ENST00000539599 E9PSI1 815 aa18.31■□□□□ 0.52
UBE3B-210ENST00000539599 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
UBE3B-210ENST00000539599 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms