RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
UBE3B-209ENST00000539584 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
UBE3B-209ENST00000539584 TRPM2O94759 1503 aa17.38■□□□□ 0.37
UBE3B-209ENST00000539584 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
UBE3B-209ENST00000539584 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
UBE3B-209ENST00000539584 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
UBE3B-209ENST00000539584 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
UBE3B-209ENST00000539584 PTPRTO14522 1441 aa17.37■□□□□ 0.37
UBE3B-209ENST00000539584 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
UBE3B-209ENST00000539584 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
UBE3B-209ENST00000539584 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-209ENST00000539584 ARAP3Q8WWN8 1544 aa17.36■□□□□ 0.37
UBE3B-209ENST00000539584 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
UBE3B-209ENST00000539584 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
UBE3B-209ENST00000539584 ABCC1P33527 1531 aa17.35■□□□□ 0.37
UBE3B-209ENST00000539584 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
UBE3B-209ENST00000539584 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
UBE3B-209ENST00000539584 UHRF1BP1LA0JNW5 1464 aa17.33■□□□□ 0.37
UBE3B-209ENST00000539584 PLIN1O60240 522 aa17.33■□□□□ 0.37
UBE3B-209ENST00000539584 CEP152O94986 1710 aa17.32■□□□□ 0.36
UBE3B-209ENST00000539584 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
UBE3B-209ENST00000539584 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
UBE3B-209ENST00000539584 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-209ENST00000539584 NEFMP07197 916 aa17.3■□□□□ 0.36
UBE3B-209ENST00000539584 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
UBE3B-209ENST00000539584 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
UBE3B-209ENST00000539584 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
UBE3B-209ENST00000539584 CHD1O14646 1710 aa17.28■□□□□ 0.36
UBE3B-209ENST00000539584 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
UBE3B-209ENST00000539584 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
UBE3B-209ENST00000539584 TET3O43151 1660 aa17.27■□□□□ 0.36
UBE3B-209ENST00000539584 KANK1Q14678 1352 aa17.27■□□□□ 0.36
UBE3B-209ENST00000539584 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
UBE3B-209ENST00000539584 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
UBE3B-209ENST00000539584 E9PSI1 815 aa17.26■□□□□ 0.35
UBE3B-209ENST00000539584 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
UBE3B-209ENST00000539584 MYOM2P54296 1465 aa17.25■□□□□ 0.35
UBE3B-209ENST00000539584 C20orf194Q5TEA3 1177 aa17.25■□□□□ 0.35
UBE3B-209ENST00000539584 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
UBE3B-209ENST00000539584 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-209ENST00000539584 ZFYVE16Q7Z3T8 1539 aa17.25■□□□□ 0.35
UBE3B-209ENST00000539584 MYOM1P52179 1685 aa17.24■□□□□ 0.35
UBE3B-209ENST00000539584 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
UBE3B-209ENST00000539584 AAMPQ13685 434 aa17.23■□□□□ 0.35
UBE3B-209ENST00000539584 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
UBE3B-209ENST00000539584 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
UBE3B-209ENST00000539584 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
UBE3B-209ENST00000539584 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
UBE3B-209ENST00000539584 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
UBE3B-209ENST00000539584 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
UBE3B-209ENST00000539584 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
UBE3B-209ENST00000539584 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
UBE3B-209ENST00000539584 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
UBE3B-209ENST00000539584 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 INO80Q9ULG1 1556 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-209ENST00000539584 ERVK-7P63135 1459 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 APAF1O14727 1248 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
UBE3B-209ENST00000539584 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
UBE3B-209ENST00000539584 NRXN1Q9ULB1 1477 aa17.15■□□□□ 0.34
UBE3B-209ENST00000539584 GSE1Q14687 1217 aa17.14■□□□□ 0.34
UBE3B-209ENST00000539584 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
UBE3B-209ENST00000539584 SETBP1Q9Y6X0 1596 aa17.13■□□□□ 0.33
UBE3B-209ENST00000539584 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
UBE3B-209ENST00000539584 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
UBE3B-209ENST00000539584 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
UBE3B-209ENST00000539584 ABCA6Q8N139 1617 aa17.11■□□□□ 0.33
UBE3B-209ENST00000539584 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
UBE3B-209ENST00000539584 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
UBE3B-209ENST00000539584 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
UBE3B-209ENST00000539584 KIF1BO60333 1816 aa17.1■□□□□ 0.33
UBE3B-209ENST00000539584 FANCAO15360 1455 aa17.1■□□□□ 0.33
UBE3B-209ENST00000539584 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
UBE3B-209ENST00000539584 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
UBE3B-209ENST00000539584 SKAP1Q86WV1 359 aa17.09■□□□□ 0.33
UBE3B-209ENST00000539584 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
UBE3B-209ENST00000539584 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
UBE3B-209ENST00000539584 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-209ENST00000539584 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.33
UBE3B-209ENST00000539584 WWC1Q8IX03 1113 aa17.08■□□□□ 0.33
UBE3B-209ENST00000539584 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.33
UBE3B-209ENST00000539584 KIF3BO15066 747 aa17.08■□□□□ 0.32
UBE3B-209ENST00000539584 BCAR3O75815 825 aa17.08■□□□□ 0.32
UBE3B-209ENST00000539584 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
UBE3B-209ENST00000539584 PMFBP1Q8TBY8 1022 aa17.08■□□□□ 0.32
UBE3B-209ENST00000539584 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
UBE3B-209ENST00000539584 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
UBE3B-209ENST00000539584 RGS3P49796 1198 aa17.06■□□□□ 0.32
UBE3B-209ENST00000539584 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
UBE3B-209ENST00000539584 VIRMAQ69YN4 1812 aaKnown RBP17.06■□□□□ 0.32
UBE3B-209ENST00000539584 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
UBE3B-209ENST00000539584 ADGRF5Q8IZF2 1346 aa17.05■□□□□ 0.32
UBE3B-209ENST00000539584 BECN1Q14457 450 aa17.04■□□□□ 0.32
UBE3B-209ENST00000539584 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
UBE3B-209ENST00000539584 ADGRL1O94910 1474 aa17.04■□□□□ 0.32
UBE3B-209ENST00000539584 ADGRB3O60242 1522 aa17.03■□□□□ 0.32
UBE3B-209ENST00000539584 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
UBE3B-209ENST00000539584 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms