RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 KIF3BO15066 747 aa8.71□□□□□ -1.02
PDZRN4-203ENST00000539469 ZC3H13Q5T200 1668 aaKnown RBP8.7□□□□□ -1.02
PDZRN4-203ENST00000539469 EFCAB6Q5THR3 1501 aa8.7□□□□□ -1.02
PDZRN4-203ENST00000539469 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
PDZRN4-203ENST00000539469 NECTIN2Q92692 538 aa8.7□□□□□ -1.02
PDZRN4-203ENST00000539469 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
PDZRN4-203ENST00000539469 ABCC3O15438 1527 aa8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 LMTK2Q8IWU2 1503 aa8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 IGSF3O75054 1194 aa8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 AGLP35573 1532 aa8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 CLTCQ00610 1675 aaKnown RBP8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 PLA2R1Q13018 1463 aa8.69□□□□□ -1.02
PDZRN4-203ENST00000539469 CFAP65Q6ZU64 1925 aaKnown RBP8.68□□□□□ -1.02
PDZRN4-203ENST00000539469 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
PDZRN4-203ENST00000539469 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
PDZRN4-203ENST00000539469 BCL11AQ9H165 835 aa8.67□□□□□ -1.02
PDZRN4-203ENST00000539469 RPRD2Q5VT52 1461 aaKnown RBP8.67□□□□□ -1.02
PDZRN4-203ENST00000539469 CLTCL1P53675 1640 aa8.67□□□□□ -1.02
PDZRN4-203ENST00000539469 TRPM2O94759 1503 aa8.66□□□□□ -1.02
PDZRN4-203ENST00000539469 PLEKHG5O94827 1062 aa8.66□□□□□ -1.02
PDZRN4-203ENST00000539469 GGT6Q6P531 493 aa8.66□□□□□ -1.02
PDZRN4-203ENST00000539469 UGGT1Q9NYU2 1555 aa8.66□□□□□ -1.02
PDZRN4-203ENST00000539469 MROH2AA6NES4 1674 aa8.66□□□□□ -1.02
PDZRN4-203ENST00000539469 SPOCK2Q92563 424 aa8.65□□□□□ -1.02
PDZRN4-203ENST00000539469 KANK1Q14678 1352 aa8.65□□□□□ -1.02
PDZRN4-203ENST00000539469 PREX1Q8TCU6 1659 aa8.65□□□□□ -1.02
PDZRN4-203ENST00000539469 NPATQ14207 1427 aa8.64□□□□□ -1.03
PDZRN4-203ENST00000539469 SYNMO15061 1565 aa8.64□□□□□ -1.03
PDZRN4-203ENST00000539469 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
PDZRN4-203ENST00000539469 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
PDZRN4-203ENST00000539469 PTPRTO14522 1441 aa8.63□□□□□ -1.03
PDZRN4-203ENST00000539469 FER1L4A9Z1Z3 1794 aa8.63□□□□□ -1.03
PDZRN4-203ENST00000539469 PIK3C2BO00750 1634 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 PROM2Q8N271 834 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 KIF1BO60333 1816 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 MYO5BQ9ULV0 1848 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 TONSLQ96HA7 1378 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
PDZRN4-203ENST00000539469 MLECQ14165 292 aa8.61□□□□□ -1.03
PDZRN4-203ENST00000539469 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
PDZRN4-203ENST00000539469 IFT172Q9UG01 1749 aa8.61□□□□□ -1.03
PDZRN4-203ENST00000539469 WASHC2CQ9Y4E1 1318 aa8.61□□□□□ -1.03
PDZRN4-203ENST00000539469 CCDC144AA2RUR9 1427 aa8.61□□□□□ -1.03
PDZRN4-203ENST00000539469 C3P01024 1663 aa8.6□□□□□ -1.03
PDZRN4-203ENST00000539469 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
PDZRN4-203ENST00000539469 NOS1P29475 1434 aa8.59□□□□□ -1.03
PDZRN4-203ENST00000539469 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
PDZRN4-203ENST00000539469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDZRN4-203ENST00000539469 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
PDZRN4-203ENST00000539469 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
PDZRN4-203ENST00000539469 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 MKRN4PQ13434 485 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 POTEHQ6S545 545 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 ADGRB3O60242 1522 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 RIMS1Q86UR5 1692 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 SPATA31D1Q6ZQQ2 1576 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 NKX1-1Q15270 411 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 ANP32EQ9BTT0 268 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 ERVK-7P63135 1459 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 CNTLNQ9NXG0 1405 aa8.58□□□□□ -1.04
PDZRN4-203ENST00000539469 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
PDZRN4-203ENST00000539469 PPLO60437 1756 aa8.57□□□□□ -1.04
PDZRN4-203ENST00000539469 ADAMTSL3P82987 1691 aa8.57□□□□□ -1.04
PDZRN4-203ENST00000539469 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
PDZRN4-203ENST00000539469 NEURL4Q96JN8 1562 aa8.57□□□□□ -1.04
PDZRN4-203ENST00000539469 APBB1O00213 710 aa8.56□□□□□ -1.04
PDZRN4-203ENST00000539469 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
PDZRN4-203ENST00000539469 TRPM1Q7Z4N2 1603 aa8.56□□□□□ -1.04
PDZRN4-203ENST00000539469 FBXO31Q5XUX0 539 aaPredicted RBP8.56□□□□□ -1.04
PDZRN4-203ENST00000539469 NBPF8Q3BBV2 869 aa8.55□□□□□ -1.04
PDZRN4-203ENST00000539469 ZMYM3Q14202 1370 aa8.54□□□□□ -1.04
PDZRN4-203ENST00000539469 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
PDZRN4-203ENST00000539469 UHRF1BP1Q6BDS2 1440 aa8.53□□□□□ -1.04
PDZRN4-203ENST00000539469 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.04
PDZRN4-203ENST00000539469 UBR1Q8IWV7 1749 aa8.52□□□□□ -1.04
PDZRN4-203ENST00000539469 PRAG1Q86YV5 1406 aa8.52□□□□□ -1.05
PDZRN4-203ENST00000539469 MYO3AQ8NEV4 1616 aa8.52□□□□□ -1.05
PDZRN4-203ENST00000539469 DCAF11Q8TEB1 546 aa8.51□□□□□ -1.05
PDZRN4-203ENST00000539469 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
PDZRN4-203ENST00000539469 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
PDZRN4-203ENST00000539469 RAD21O60216 631 aa8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 CEBPAP49715 358 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 IDI1Q13907 227 aa8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 MYOM2P54296 1465 aa8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 ZNF219Q9P2Y4 722 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 KIAA1210Q9ULL0 1709 aa8.5□□□□□ -1.05
PDZRN4-203ENST00000539469 U3KPZ7 1027 aaPredicted RBP8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 NRXN1Q9ULB1 1477 aa8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 LAMC1P11047 1609 aa8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
PDZRN4-203ENST00000539469 A2ML1A8K2U0 1454 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms