RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
SP140-212ENST00000538494 EFCAB5A4FU69 1503 aa9.74□□□□□ -0.85
SP140-212ENST00000538494 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
SP140-212ENST00000538494 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 ZFYVE16Q7Z3T8 1539 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 KIF3CO14782 793 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 HSPA1LP34931 641 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 PBX2P40425 430 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 POTEEQ6S8J3 1075 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 TAOK2Q9UL54 1235 aa9.73□□□□□ -0.85
SP140-212ENST00000538494 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
SP140-212ENST00000538494 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
SP140-212ENST00000538494 SRCAPQ6ZRS2 3230 aa9.7□□□□□ -0.86
SP140-212ENST00000538494 MLECQ14165 292 aa9.7□□□□□ -0.86
SP140-212ENST00000538494 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
SP140-212ENST00000538494 RGS17Q9UGC6 210 aaPredicted RBP9.7□□□□□ -0.86
SP140-212ENST00000538494 ZNF335Q9H4Z2 1342 aaPredicted RBP9.7□□□□□ -0.86
SP140-212ENST00000538494 ATP10AO60312 1499 aa9.7□□□□□ -0.86
SP140-212ENST00000538494 STK25O00506 426 aa9.69□□□□□ -0.86
SP140-212ENST00000538494 TRAPPC8Q9Y2L5 1435 aa9.69□□□□□ -0.86
SP140-212ENST00000538494 HECW1Q76N89 1606 aa9.68□□□□□ -0.86
SP140-212ENST00000538494 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
SP140-212ENST00000538494 C9orf84Q5VXU9 1444 aa9.67□□□□□ -0.86
SP140-212ENST00000538494 SLC34A2O95436 690 aa9.67□□□□□ -0.86
SP140-212ENST00000538494 TMC2Q8TDI7 906 aa9.67□□□□□ -0.86
SP140-212ENST00000538494 TOM1O60784 492 aa9.65□□□□□ -0.86
SP140-212ENST00000538494 CFAP74Q9C0B2 1584 aa9.65□□□□□ -0.86
SP140-212ENST00000538494 PKD2Q13563 968 aa9.64□□□□□ -0.87
SP140-212ENST00000538494 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
SP140-212ENST00000538494 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
SP140-212ENST00000538494 C3P01024 1663 aa9.64□□□□□ -0.87
SP140-212ENST00000538494 ARHGAP33O14559 1287 aa9.63□□□□□ -0.87
SP140-212ENST00000538494 TCOF1Q13428 1488 aaKnown RBP9.63□□□□□ -0.87
SP140-212ENST00000538494 CAMSAP1Q5T5Y3 1602 aa9.63□□□□□ -0.87
SP140-212ENST00000538494 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
SP140-212ENST00000538494 REREQ9P2R6 1566 aa9.62□□□□□ -0.87
SP140-212ENST00000538494 CTTNBP2Q8WZ74 1663 aa9.61□□□□□ -0.87
SP140-212ENST00000538494 NPATQ14207 1427 aa9.61□□□□□ -0.87
SP140-212ENST00000538494 SCAPERQ9BY12 1400 aa9.61□□□□□ -0.87
SP140-212ENST00000538494 AGLP35573 1532 aa9.61□□□□□ -0.87
SP140-212ENST00000538494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
SP140-212ENST00000538494 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
SP140-212ENST00000538494 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
SP140-212ENST00000538494 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
SP140-212ENST00000538494 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
SP140-212ENST00000538494 FAM9AQ8IZU1 332 aaPredicted RBP9.59□□□□□ -0.87
SP140-212ENST00000538494 PLCH2O75038 1416 aa9.58□□□□□ -0.88
SP140-212ENST00000538494 CPS1P31327 1500 aa9.58□□□□□ -0.88
SP140-212ENST00000538494 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
SP140-212ENST00000538494 PIP4K2BP78356 416 aa9.58□□□□□ -0.88
SP140-212ENST00000538494 NUP153P49790 1475 aaKnown RBP9.58□□□□□ -0.88
SP140-212ENST00000538494 CNTLNQ9NXG0 1405 aa9.57□□□□□ -0.88
SP140-212ENST00000538494 PPP1R37O75864 691 aa9.57□□□□□ -0.88
SP140-212ENST00000538494 PSEN2P49810 448 aa9.57□□□□□ -0.88
SP140-212ENST00000538494 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
SP140-212ENST00000538494 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
SP140-212ENST00000538494 RAPGEF6Q8TEU7 1601 aa9.56□□□□□ -0.88
SP140-212ENST00000538494 KDM5CP41229 1560 aa9.56□□□□□ -0.88
SP140-212ENST00000538494 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
SP140-212ENST00000538494 TK2O00142 265 aa9.55□□□□□ -0.88
SP140-212ENST00000538494 HRO43593 1189 aa9.54□□□□□ -0.88
SP140-212ENST00000538494 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
SP140-212ENST00000538494 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
SP140-212ENST00000538494 ZNF142P52746 1687 aaPredicted RBP9.54□□□□□ -0.88
SP140-212ENST00000538494 ZNF518AQ6AHZ1 1483 aa9.53□□□□□ -0.88
SP140-212ENST00000538494 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
SP140-212ENST00000538494 DIP2CQ9Y2E4 1556 aa9.53□□□□□ -0.88
SP140-212ENST00000538494 MLH3Q9UHC1 1453 aa9.53□□□□□ -0.88
SP140-212ENST00000538494 SHANK2Q9UPX8 1470 aa9.53□□□□□ -0.88
SP140-212ENST00000538494 RGL2O15211 777 aa9.52□□□□□ -0.89
SP140-212ENST00000538494 PRXQ9BXM0 1461 aa9.52□□□□□ -0.89
SP140-212ENST00000538494 MROH2AA6NES4 1674 aa9.51□□□□□ -0.89
SP140-212ENST00000538494 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
SP140-212ENST00000538494 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
SP140-212ENST00000538494 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
SP140-212ENST00000538494 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
SP140-212ENST00000538494 EFCAB2Q5VUJ9 269 aa9.5□□□□□ -0.89
SP140-212ENST00000538494 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
SP140-212ENST00000538494 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
SP140-212ENST00000538494 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
SP140-212ENST00000538494 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
SP140-212ENST00000538494 ESF1Q9H501 851 aaKnown RBP9.49□□□□□ -0.89
SP140-212ENST00000538494 CEP170BQ9Y4F5 1589 aaPredicted RBP9.48□□□□□ -0.89
SP140-212ENST00000538494 VWDEQ8N2E2 1590 aa9.47□□□□□ -0.89
SP140-212ENST00000538494 ABCA6Q8N139 1617 aa9.47□□□□□ -0.89
SP140-212ENST00000538494 TBC1D12O60347 775 aa9.47□□□□□ -0.89
SP140-212ENST00000538494 FOXK1P85037 733 aa9.47□□□□□ -0.89
SP140-212ENST00000538494 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
SP140-212ENST00000538494 PTPN5P54829 565 aa9.46□□□□□ -0.9
SP140-212ENST00000538494 KCNK17Q96T54 332 aa9.46□□□□□ -0.9
SP140-212ENST00000538494 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
SP140-212ENST00000538494 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
SP140-212ENST00000538494 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
SP140-212ENST00000538494 MED14O60244 1454 aa9.44□□□□□ -0.9
SP140-212ENST00000538494 DNMT1P26358 1616 aaKnown RBP9.44□□□□□ -0.9
SP140-212ENST00000538494 SUPT6HQ7KZ85 1726 aaKnown RBP9.43□□□□□ -0.9
SP140-212ENST00000538494 DSG2Q14126 1118 aa9.43□□□□□ -0.9
SP140-212ENST00000538494 LRRC7Q96NW7 1537 aa9.42□□□□□ -0.9
SP140-212ENST00000538494 FAM135BQ49AJ0 1406 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms