RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 OATP04181 439 aa12.16□□□□□ -0.46
MDM1-208ENST00000538454 FECHP22830 423 aa12.16□□□□□ -0.46
MDM1-208ENST00000538454 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
MDM1-208ENST00000538454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
MDM1-208ENST00000538454 PXYLP1Q8TE99 480 aa12.15□□□□□ -0.46
MDM1-208ENST00000538454 COPS2P61201 443 aa12.13□□□□□ -0.47
MDM1-208ENST00000538454 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
MDM1-208ENST00000538454 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
MDM1-208ENST00000538454 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
MDM1-208ENST00000538454 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
MDM1-208ENST00000538454 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
MDM1-208ENST00000538454 CFHP08603 1231 aa12.09□□□□□ -0.47
MDM1-208ENST00000538454 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
MDM1-208ENST00000538454 SLC10A3P09131 477 aa12.07□□□□□ -0.48
MDM1-208ENST00000538454 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
MDM1-208ENST00000538454 NKX2-3Q8TAU0 364 aa12.06□□□□□ -0.48
MDM1-208ENST00000538454 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
MDM1-208ENST00000538454 ZPR1O75312 459 aa12.04□□□□□ -0.48
MDM1-208ENST00000538454 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
MDM1-208ENST00000538454 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
MDM1-208ENST00000538454 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
MDM1-208ENST00000538454 RSPH4AQ5TD94 716 aa12.01□□□□□ -0.49
MDM1-208ENST00000538454 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
MDM1-208ENST00000538454 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
MDM1-208ENST00000538454 PHOX2BQ99453 314 aa12□□□□□ -0.49
MDM1-208ENST00000538454 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
MDM1-208ENST00000538454 TLL1O43897 1013 aa11.98□□□□□ -0.49
MDM1-208ENST00000538454 GGCXP38435 758 aa11.98□□□□□ -0.49
MDM1-208ENST00000538454 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
MDM1-208ENST00000538454 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
MDM1-208ENST00000538454 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
MDM1-208ENST00000538454 NR1I2O75469 434 aa11.94□□□□□ -0.5
MDM1-208ENST00000538454 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
MDM1-208ENST00000538454 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
MDM1-208ENST00000538454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.91□□□□□ -0.5
MDM1-208ENST00000538454 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
MDM1-208ENST00000538454 IRF6O14896 467 aa11.9□□□□□ -0.5
MDM1-208ENST00000538454 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
MDM1-208ENST00000538454 ADH1BP00325 375 aa11.89□□□□□ -0.51
MDM1-208ENST00000538454 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
MDM1-208ENST00000538454 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
MDM1-208ENST00000538454 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
MDM1-208ENST00000538454 S1PR4O95977 384 aa11.88□□□□□ -0.51
MDM1-208ENST00000538454 FUT2Q10981 343 aa11.88□□□□□ -0.51
MDM1-208ENST00000538454 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
MDM1-208ENST00000538454 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
MDM1-208ENST00000538454 GCGRP47871 477 aa11.87□□□□□ -0.51
MDM1-208ENST00000538454 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
MDM1-208ENST00000538454 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
MDM1-208ENST00000538454 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
MDM1-208ENST00000538454 MORN1Q5T089 497 aa11.84□□□□□ -0.51
MDM1-208ENST00000538454 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
MDM1-208ENST00000538454 SPSB2Q99619 263 aa11.83□□□□□ -0.52
MDM1-208ENST00000538454 GFRA3O60609 400 aa11.82□□□□□ -0.52
MDM1-208ENST00000538454 Q6ZNB5 142 aa11.82□□□□□ -0.52
MDM1-208ENST00000538454 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
MDM1-208ENST00000538454 CD46P15529 392 aa11.81□□□□□ -0.52
MDM1-208ENST00000538454 LAPTM4AQ15012 233 aa11.81□□□□□ -0.52
MDM1-208ENST00000538454 SLC27A5Q9Y2P5 690 aa11.8□□□□□ -0.52
MDM1-208ENST00000538454 SLC19A1P41440 591 aa11.79□□□□□ -0.52
MDM1-208ENST00000538454 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
MDM1-208ENST00000538454 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
MDM1-208ENST00000538454 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
MDM1-208ENST00000538454 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
MDM1-208ENST00000538454 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
MDM1-208ENST00000538454 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
MDM1-208ENST00000538454 CLCN1P35523 988 aa11.76□□□□□ -0.53
MDM1-208ENST00000538454 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
MDM1-208ENST00000538454 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
MDM1-208ENST00000538454 KDM4AO75164 1064 aa11.74□□□□□ -0.53
MDM1-208ENST00000538454 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
MDM1-208ENST00000538454 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
MDM1-208ENST00000538454 ZMYND10O75800 440 aa11.73□□□□□ -0.53
MDM1-208ENST00000538454 PLA2G2CQ5R387 149 aa11.73□□□□□ -0.53
MDM1-208ENST00000538454 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
MDM1-208ENST00000538454 RNF19BQ6ZMZ0 732 aa11.73□□□□□ -0.53
MDM1-208ENST00000538454 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
MDM1-208ENST00000538454 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
MDM1-208ENST00000538454 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
MDM1-208ENST00000538454 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
MDM1-208ENST00000538454 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
MDM1-208ENST00000538454 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
MDM1-208ENST00000538454 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
MDM1-208ENST00000538454 USP46P62068 366 aa11.69□□□□□ -0.54
MDM1-208ENST00000538454 Q3C1V9 767 aa11.69□□□□□ -0.54
MDM1-208ENST00000538454 HLA-CQ95604 372 aa11.69□□□□□ -0.54
MDM1-208ENST00000538454 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
MDM1-208ENST00000538454 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
MDM1-208ENST00000538454 ZNF697Q5TEC3 545 aa11.68□□□□□ -0.54
MDM1-208ENST00000538454 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
MDM1-208ENST00000538454 HOXA2O43364 376 aa11.67□□□□□ -0.54
MDM1-208ENST00000538454 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
MDM1-208ENST00000538454 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
MDM1-208ENST00000538454 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
MDM1-208ENST00000538454 LCE2BO14633 110 aa11.65□□□□□ -0.54
MDM1-208ENST00000538454 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
MDM1-208ENST00000538454 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
MDM1-208ENST00000538454 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
MDM1-208ENST00000538454 AMHR2Q16671 573 aa11.63□□□□□ -0.55
MDM1-208ENST00000538454 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms