RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MIA2Q96PC5 1412 aa6.7□□□□□ -1.34
LRP6-203ENST00000538239 RIPK4P57078 832 aa6.7□□□□□ -1.34
LRP6-203ENST00000538239 LAMC3Q9Y6N6 1575 aa6.7□□□□□ -1.34
LRP6-203ENST00000538239 POGZQ7Z3K3 1410 aa6.7□□□□□ -1.34
LRP6-203ENST00000538239 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
LRP6-203ENST00000538239 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
LRP6-203ENST00000538239 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 ANKLE2Q86XL3 938 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 TRIM34Q9BYJ4 488 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 PPP1R1BQ9UD71 204 aaPredicted RBP6.69□□□□□ -1.34
LRP6-203ENST00000538239 C9orf84Q5VXU9 1444 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 RRBP1Q9P2E9 1410 aaKnown RBP6.69□□□□□ -1.34
LRP6-203ENST00000538239 AIMP1Q12904 312 aaKnown RBP6.69□□□□□ -1.34
LRP6-203ENST00000538239 VPS37DQ86XT2 251 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 RILPL2Q969X0 211 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 TSPYL4Q9UJ04 414 aa6.69□□□□□ -1.34
LRP6-203ENST00000538239 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
LRP6-203ENST00000538239 EHBP1L1Q8N3D4 1523 aa6.68□□□□□ -1.34
LRP6-203ENST00000538239 ERICH3Q5RHP9 1530 aa6.68□□□□□ -1.34
LRP6-203ENST00000538239 NOL10Q9BSC4 688 aaKnown RBP6.68□□□□□ -1.34
LRP6-203ENST00000538239 FAM177BA6PVY3 158 aa6.68□□□□□ -1.34
LRP6-203ENST00000538239 APAF1O14727 1248 aa6.68□□□□□ -1.34
LRP6-203ENST00000538239 EFCAB5A4FU69 1503 aa6.68□□□□□ -1.34
LRP6-203ENST00000538239 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
LRP6-203ENST00000538239 RBM42Q9BTD8 480 aaKnown RBP6.67□□□□□ -1.34
LRP6-203ENST00000538239 CDK13Q14004 1512 aaKnown RBP6.67□□□□□ -1.34
LRP6-203ENST00000538239 PLEKHH2Q8IVE3 1493 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 DCAF8L1A6NGE4 600 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 PLIN1O60240 522 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 DDX58O95786 925 aaKnown RBP6.67□□□□□ -1.34
LRP6-203ENST00000538239 BICRAQ9NZM4 1560 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 ARAP1Q96P48 1450 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 DRC7Q8IY82 874 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 RBM33Q96EV2 1170 aaKnown RBP6.67□□□□□ -1.34
LRP6-203ENST00000538239 FOXD4L1Q9NU39 408 aa6.67□□□□□ -1.34
LRP6-203ENST00000538239 NOP58Q9Y2X3 529 aaKnown RBP6.67□□□□□ -1.34
LRP6-203ENST00000538239 RASSF8Q8NHQ8 419 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 RIC3Q7Z5B4 369 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 CDK19Q9BWU1 502 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 FKBP5Q13451 457 aaPredicted RBP6.66□□□□□ -1.34
LRP6-203ENST00000538239 ANKRD45Q5TZF3 282 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 MARCH6O60337 910 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 IQGAP2Q13576 1575 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 CD109Q6YHK3 1445 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
LRP6-203ENST00000538239 SUPT6HQ7KZ85 1726 aaKnown RBP6.66□□□□□ -1.34
LRP6-203ENST00000538239 E9PSI1 815 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 TOM1L2Q6ZVM7 507 aa6.66□□□□□ -1.34
LRP6-203ENST00000538239 CTDP1Q9Y5B0 961 aaPredicted RBP6.66□□□□□ -1.34
LRP6-203ENST00000538239 ZKSCAN2Q63HK3 967 aa6.65□□□□□ -1.34
LRP6-203ENST00000538239 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.34
LRP6-203ENST00000538239 AMOTL1Q8IY63 956 aa6.65□□□□□ -1.34
LRP6-203ENST00000538239 DDX54Q8TDD1 881 aaKnown RBP6.65□□□□□ -1.34
LRP6-203ENST00000538239 ARHGEF11O15085 1522 aa6.65□□□□□ -1.35
LRP6-203ENST00000538239 PDE3BQ13370 1112 aa6.65□□□□□ -1.35
LRP6-203ENST00000538239 ERBINQ96RT1 1412 aa6.65□□□□□ -1.35
LRP6-203ENST00000538239 SAMD1Q6SPF0 538 aaPredicted RBP6.64□□□□□ -1.35
LRP6-203ENST00000538239 RUNDC1Q96C34 613 aa6.64□□□□□ -1.35
LRP6-203ENST00000538239 APPP05067 770 aa6.64□□□□□ -1.35
LRP6-203ENST00000538239 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
LRP6-203ENST00000538239 KIAA0586Q9BVV6 1533 aa6.64□□□□□ -1.35
LRP6-203ENST00000538239 NRDCO43847 1150 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 CREBRFQ8IUR6 639 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 FOXD4L4Q8WXT5 416 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 SLKQ9H2G2 1235 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 PRKRIP1Q9H875 184 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 UNC13AQ9UPW8 1703 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 IFIT2P09913 472 aaKnown RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 COG6Q9Y2V7 657 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 FYB1O15117 783 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 TATP17735 454 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 KIF6Q6ZMV9 814 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 CABP1Q9NZU7 370 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 PLEKHO1Q53GL0 409 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 STAC3Q96MF2 364 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 CEBPAP49715 358 aaPredicted RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 NBPF1Q3BBV0 1214 aa6.63□□□□□ -1.35
LRP6-203ENST00000538239 HTATSF1O43719 755 aaKnown RBP6.63□□□□□ -1.35
LRP6-203ENST00000538239 G3BP1Q13283 466 aaKnown RBP eCLIP6.63□□□□□ -1.35
LRP6-203ENST00000538239 RTEL1-TNFRSF6BF6WH68 1400 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 CUL7Q14999 1698 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 KIF14Q15058 1648 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 MTHFSP49914 203 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 GRIN2AQ12879 1464 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 PLB1Q6P1J6 1458 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 KIF7Q2M1P5 1343 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 KIF16BQ96L93 1317 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 CCDC27Q2M243 656 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 CRBNQ96SW2 442 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 DIAPH3Q9NSV4 1193 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 SLC52A1Q9NWF4 448 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 DAPK1P53355 1430 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 CABP4P57796 275 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 GNAI1P63096 354 aa6.62□□□□□ -1.35
LRP6-203ENST00000538239 DHX16O60231 1041 aaKnown RBP6.62□□□□□ -1.35
LRP6-203ENST00000538239 AKAP17AQ02040 695 aaKnown RBP6.62□□□□□ -1.35
LRP6-203ENST00000538239 NEUROD6Q96NK8 337 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms