RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 RXRBP28702 533 aa17.62■□□□□ 0.41
CLPB-208ENST00000538021 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
CLPB-208ENST00000538021 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
CLPB-208ENST00000538021 ABCC5O15440 1437 aa17.61■□□□□ 0.41
CLPB-208ENST00000538021 SLC52A1Q9NWF4 448 aa17.6■□□□□ 0.41
CLPB-208ENST00000538021 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
CLPB-208ENST00000538021 SRCAPQ6ZRS2 3230 aa17.59■□□□□ 0.41
CLPB-208ENST00000538021 LMTK2Q8IWU2 1503 aa17.58■□□□□ 0.41
CLPB-208ENST00000538021 NOS1P29475 1434 aa17.58■□□□□ 0.41
CLPB-208ENST00000538021 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
CLPB-208ENST00000538021 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.4
CLPB-208ENST00000538021 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.4
CLPB-208ENST00000538021 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.4
CLPB-208ENST00000538021 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.4
CLPB-208ENST00000538021 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.4
CLPB-208ENST00000538021 CHD2O14647 1828 aaKnown RBP17.57■□□□□ 0.4
CLPB-208ENST00000538021 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
CLPB-208ENST00000538021 ATF3P18847 181 aa17.56■□□□□ 0.4
CLPB-208ENST00000538021 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
CLPB-208ENST00000538021 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
CLPB-208ENST00000538021 DAPK1P53355 1430 aa17.55■□□□□ 0.4
CLPB-208ENST00000538021 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
CLPB-208ENST00000538021 NCOA3Q9Y6Q9 1424 aa17.54■□□□□ 0.4
CLPB-208ENST00000538021 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
CLPB-208ENST00000538021 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
CLPB-208ENST00000538021 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
CLPB-208ENST00000538021 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
CLPB-208ENST00000538021 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
CLPB-208ENST00000538021 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CLPB-208ENST00000538021 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
CLPB-208ENST00000538021 AFF2P51816 1311 aa17.51■□□□□ 0.39
CLPB-208ENST00000538021 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
CLPB-208ENST00000538021 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
CLPB-208ENST00000538021 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
CLPB-208ENST00000538021 MYO5BQ9ULV0 1848 aa17.51■□□□□ 0.39
CLPB-208ENST00000538021 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
CLPB-208ENST00000538021 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
CLPB-208ENST00000538021 GCC2Q8IWJ2 1684 aa17.48■□□□□ 0.39
CLPB-208ENST00000538021 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLPB-208ENST00000538021 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
CLPB-208ENST00000538021 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
CLPB-208ENST00000538021 TMEM131LA2VDJ0 1609 aa17.46■□□□□ 0.39
CLPB-208ENST00000538021 ADAMTS13Q76LX8 1427 aa17.46■□□□□ 0.39
CLPB-208ENST00000538021 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
CLPB-208ENST00000538021 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
CLPB-208ENST00000538021 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
CLPB-208ENST00000538021 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
CLPB-208ENST00000538021 RGS12O14924 1447 aa17.44■□□□□ 0.38
CLPB-208ENST00000538021 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
CLPB-208ENST00000538021 APLP2Q06481 763 aa17.43■□□□□ 0.38
CLPB-208ENST00000538021 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
CLPB-208ENST00000538021 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
CLPB-208ENST00000538021 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
CLPB-208ENST00000538021 LRRC59Q96AG4 307 aaKnown RBP17.41■□□□□ 0.38
CLPB-208ENST00000538021 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.38
CLPB-208ENST00000538021 TRPM2O94759 1503 aa17.39■□□□□ 0.37
CLPB-208ENST00000538021 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
CLPB-208ENST00000538021 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
CLPB-208ENST00000538021 ADAMTS2O95450 1211 aa17.37■□□□□ 0.37
CLPB-208ENST00000538021 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
CLPB-208ENST00000538021 DCCP43146 1447 aa17.37■□□□□ 0.37
CLPB-208ENST00000538021 ADGRL2O95490 1459 aa17.37■□□□□ 0.37
CLPB-208ENST00000538021 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
CLPB-208ENST00000538021 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
CLPB-208ENST00000538021 MST1RQ04912 1400 aa17.36■□□□□ 0.37
CLPB-208ENST00000538021 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
CLPB-208ENST00000538021 FOXD1Q16676 465 aa17.35■□□□□ 0.37
CLPB-208ENST00000538021 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
CLPB-208ENST00000538021 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
CLPB-208ENST00000538021 UNC13BO14795 1591 aa17.32■□□□□ 0.36
CLPB-208ENST00000538021 USP21Q9UK80 565 aa17.31■□□□□ 0.36
CLPB-208ENST00000538021 E9PCH4 1651 aa17.3■□□□□ 0.36
CLPB-208ENST00000538021 EP400Q96L91 3159 aa17.29■□□□□ 0.36
CLPB-208ENST00000538021 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
CLPB-208ENST00000538021 XRN1Q8IZH2 1706 aaKnown RBP17.29■□□□□ 0.36
CLPB-208ENST00000538021 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
CLPB-208ENST00000538021 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
CLPB-208ENST00000538021 METP08581 1390 aa17.27■□□□□ 0.35
CLPB-208ENST00000538021 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
CLPB-208ENST00000538021 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
CLPB-208ENST00000538021 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
CLPB-208ENST00000538021 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
CLPB-208ENST00000538021 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
CLPB-208ENST00000538021 CCDC125Q86Z20 511 aa17.22■□□□□ 0.35
CLPB-208ENST00000538021 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
CLPB-208ENST00000538021 NUP155O75694 1391 aa17.22■□□□□ 0.35
CLPB-208ENST00000538021 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
CLPB-208ENST00000538021 ATRNO75882 1429 aa17.21■□□□□ 0.34
CLPB-208ENST00000538021 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
CLPB-208ENST00000538021 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.34
CLPB-208ENST00000538021 LAMC1P11047 1609 aa17.15■□□□□ 0.34
CLPB-208ENST00000538021 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
CLPB-208ENST00000538021 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
CLPB-208ENST00000538021 ROCK1Q13464 1354 aa17.13■□□□□ 0.33
CLPB-208ENST00000538021 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
CLPB-208ENST00000538021 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
CLPB-208ENST00000538021 ITGAEP38570 1179 aa17.12■□□□□ 0.33
CLPB-208ENST00000538021 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
CLPB-208ENST00000538021 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
CLPB-208ENST00000538021 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms