RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 CHD1O14646 1710 aa12.74□□□□□ -0.37
GGA3-201ENST00000537686 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
GGA3-201ENST00000537686 BCL2L13Q9BXK5 485 aa12.72□□□□□ -0.37
GGA3-201ENST00000537686 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
GGA3-201ENST00000537686 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
GGA3-201ENST00000537686 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
GGA3-201ENST00000537686 SLC4A10Q6U841 1118 aa12.71□□□□□ -0.37
GGA3-201ENST00000537686 ABCA8O94911 1581 aa12.71□□□□□ -0.37
GGA3-201ENST00000537686 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
GGA3-201ENST00000537686 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.38
GGA3-201ENST00000537686 APAF1O14727 1248 aa12.71□□□□□ -0.38
GGA3-201ENST00000537686 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.38
GGA3-201ENST00000537686 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
GGA3-201ENST00000537686 MCCP23508 829 aa12.7□□□□□ -0.38
GGA3-201ENST00000537686 ITSN2Q9NZM3 1697 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 PLIN1O60240 522 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 SLKQ9H2G2 1235 aaPredicted RBP12.69□□□□□ -0.38
GGA3-201ENST00000537686 TRAPPC8Q9Y2L5 1435 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 NBPF1Q3BBV0 1214 aa12.69□□□□□ -0.38
GGA3-201ENST00000537686 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
GGA3-201ENST00000537686 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
GGA3-201ENST00000537686 ZBED9Q6R2W3 1325 aa12.68□□□□□ -0.38
GGA3-201ENST00000537686 KIAA1211Q6ZU35 1233 aa12.67□□□□□ -0.38
GGA3-201ENST00000537686 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
GGA3-201ENST00000537686 COG3Q96JB2 828 aa12.67□□□□□ -0.38
GGA3-201ENST00000537686 WASHC2AQ641Q2 1341 aa12.67□□□□□ -0.38
GGA3-201ENST00000537686 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
GGA3-201ENST00000537686 DNTTIP2Q5QJE6 756 aaKnown RBP12.66□□□□□ -0.38
GGA3-201ENST00000537686 CCDC7Q96M83 1385 aa12.66□□□□□ -0.38
GGA3-201ENST00000537686 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
GGA3-201ENST00000537686 HMMRO75330 724 aa12.65□□□□□ -0.38
GGA3-201ENST00000537686 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
GGA3-201ENST00000537686 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
GGA3-201ENST00000537686 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
GGA3-201ENST00000537686 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
GGA3-201ENST00000537686 E9PSI1 815 aa12.63□□□□□ -0.39
GGA3-201ENST00000537686 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
GGA3-201ENST00000537686 DNMT1P26358 1616 aaKnown RBP12.63□□□□□ -0.39
GGA3-201ENST00000537686 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
GGA3-201ENST00000537686 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
GGA3-201ENST00000537686 RPRD2Q5VT52 1461 aaKnown RBP12.62□□□□□ -0.39
GGA3-201ENST00000537686 GLIPR1L2Q4G1C9 344 aa12.62□□□□□ -0.39
GGA3-201ENST00000537686 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
GGA3-201ENST00000537686 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
GGA3-201ENST00000537686 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
GGA3-201ENST00000537686 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
GGA3-201ENST00000537686 DHX29Q7Z478 1369 aaKnown RBP12.61□□□□□ -0.39
GGA3-201ENST00000537686 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
GGA3-201ENST00000537686 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
GGA3-201ENST00000537686 DENND4BO75064 1496 aaPredicted RBP12.61□□□□□ -0.39
GGA3-201ENST00000537686 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
GGA3-201ENST00000537686 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
GGA3-201ENST00000537686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
GGA3-201ENST00000537686 KDM5BQ9UGL1 1544 aa12.6□□□□□ -0.39
GGA3-201ENST00000537686 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
GGA3-201ENST00000537686 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
GGA3-201ENST00000537686 GGNBP2Q9H3C7 697 aa12.59□□□□□ -0.39
GGA3-201ENST00000537686 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
GGA3-201ENST00000537686 UHRF1BP1LA0JNW5 1464 aa12.58□□□□□ -0.39
GGA3-201ENST00000537686 TEFQ10587 303 aa12.58□□□□□ -0.39
GGA3-201ENST00000537686 DEKP35659 375 aaKnown RBP12.58□□□□□ -0.4
GGA3-201ENST00000537686 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
GGA3-201ENST00000537686 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
GGA3-201ENST00000537686 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
GGA3-201ENST00000537686 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
GGA3-201ENST00000537686 MBD5Q9P267 1494 aa12.57□□□□□ -0.4
GGA3-201ENST00000537686 RIPK4P57078 832 aa12.57□□□□□ -0.4
GGA3-201ENST00000537686 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
GGA3-201ENST00000537686 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
GGA3-201ENST00000537686 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
GGA3-201ENST00000537686 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
GGA3-201ENST00000537686 PZPP20742 1482 aa12.56□□□□□ -0.4
GGA3-201ENST00000537686 DUOX2Q9NRD8 1548 aa12.56□□□□□ -0.4
GGA3-201ENST00000537686 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
GGA3-201ENST00000537686 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
GGA3-201ENST00000537686 CNTLNQ9NXG0 1405 aa12.55□□□□□ -0.4
GGA3-201ENST00000537686 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
GGA3-201ENST00000537686 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
GGA3-201ENST00000537686 PDE4AP27815 886 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
GGA3-201ENST00000537686 GPATCH3Q96I76 525 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
GGA3-201ENST00000537686 ERBINQ96RT1 1412 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 HMOX1P09601 288 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
GGA3-201ENST00000537686 SLC52A1Q9NWF4 448 aa12.54□□□□□ -0.4
GGA3-201ENST00000537686 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
GGA3-201ENST00000537686 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 MTHFSP49914 203 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 PSME1Q06323 249 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 KDM6BO15054 1643 aa12.53□□□□□ -0.4
GGA3-201ENST00000537686 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms