RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
LMO3-215ENST00000537304 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
LMO3-215ENST00000537304 RGS3P49796 1198 aa13.87□□□□□ -0.19
LMO3-215ENST00000537304 PDE3AQ14432 1141 aa13.87□□□□□ -0.19
LMO3-215ENST00000537304 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
LMO3-215ENST00000537304 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
LMO3-215ENST00000537304 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
LMO3-215ENST00000537304 CDCA8Q53HL2 280 aa13.86□□□□□ -0.19
LMO3-215ENST00000537304 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
LMO3-215ENST00000537304 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
LMO3-215ENST00000537304 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
LMO3-215ENST00000537304 POGKQ9P215 609 aa13.85□□□□□ -0.19
LMO3-215ENST00000537304 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
LMO3-215ENST00000537304 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
LMO3-215ENST00000537304 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
LMO3-215ENST00000537304 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
LMO3-215ENST00000537304 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 E9PSI1 815 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 PTMSP20962 102 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 MRE11P49959 708 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
LMO3-215ENST00000537304 PANK3Q9H999 370 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
LMO3-215ENST00000537304 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
LMO3-215ENST00000537304 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.2
LMO3-215ENST00000537304 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 ANTXR1Q9H6X2 564 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 USP19O94966 1318 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 SYNMO15061 1565 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
LMO3-215ENST00000537304 ZCCHC11Q5TAX3 1644 aaKnown RBP13.81□□□□□ -0.2
LMO3-215ENST00000537304 RNF17Q9BXT8 1623 aaKnown RBP13.81□□□□□ -0.2
LMO3-215ENST00000537304 DDX11L8A8MPP1 907 aa13.81□□□□□ -0.2
LMO3-215ENST00000537304 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
LMO3-215ENST00000537304 TESK2Q96S53 571 aa13.81□□□□□ -0.2
LMO3-215ENST00000537304 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
LMO3-215ENST00000537304 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
LMO3-215ENST00000537304 TPM2P07951 284 aa13.8□□□□□ -0.2
LMO3-215ENST00000537304 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
LMO3-215ENST00000537304 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
LMO3-215ENST00000537304 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
LMO3-215ENST00000537304 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
LMO3-215ENST00000537304 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
LMO3-215ENST00000537304 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
LMO3-215ENST00000537304 ASXL1Q8IXJ9 1541 aa13.79□□□□□ -0.2
LMO3-215ENST00000537304 MCM4P33991 863 aa13.79□□□□□ -0.2
LMO3-215ENST00000537304 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
LMO3-215ENST00000537304 UNC13BO14795 1591 aa13.78□□□□□ -0.2
LMO3-215ENST00000537304 CDC42BPBQ9Y5S2 1711 aa13.78□□□□□ -0.2
LMO3-215ENST00000537304 A2MP01023 1474 aa13.78□□□□□ -0.2
LMO3-215ENST00000537304 SCAPERQ9BY12 1400 aa13.78□□□□□ -0.2
LMO3-215ENST00000537304 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMO3-215ENST00000537304 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
LMO3-215ENST00000537304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.77□□□□□ -0.2
LMO3-215ENST00000537304 ATP10AO60312 1499 aa13.77□□□□□ -0.21
LMO3-215ENST00000537304 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
LMO3-215ENST00000537304 TTC37Q6PGP7 1564 aa13.76□□□□□ -0.21
LMO3-215ENST00000537304 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
LMO3-215ENST00000537304 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
LMO3-215ENST00000537304 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
LMO3-215ENST00000537304 WDR7Q9Y4E6 1490 aa13.75□□□□□ -0.21
LMO3-215ENST00000537304 CENPJQ9HC77 1338 aaPredicted RBP13.75□□□□□ -0.21
LMO3-215ENST00000537304 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
LMO3-215ENST00000537304 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
LMO3-215ENST00000537304 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
LMO3-215ENST00000537304 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
LMO3-215ENST00000537304 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
LMO3-215ENST00000537304 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
LMO3-215ENST00000537304 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
LMO3-215ENST00000537304 ESPNB1AK53 854 aa13.72□□□□□ -0.21
LMO3-215ENST00000537304 TRAK2O60296 914 aa13.72□□□□□ -0.21
LMO3-215ENST00000537304 ZMYND15Q9H091 742 aa13.72□□□□□ -0.21
LMO3-215ENST00000537304 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
LMO3-215ENST00000537304 IGHDP01880 384 aa13.72□□□□□ -0.21
LMO3-215ENST00000537304 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
LMO3-215ENST00000537304 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
LMO3-215ENST00000537304 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
LMO3-215ENST00000537304 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
LMO3-215ENST00000537304 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.21
LMO3-215ENST00000537304 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
LMO3-215ENST00000537304 ARHGAP5Q13017 1502 aa13.71□□□□□ -0.21
LMO3-215ENST00000537304 MAGI2Q86UL8 1455 aa13.71□□□□□ -0.22
LMO3-215ENST00000537304 PLCH2O75038 1416 aa13.7□□□□□ -0.22
LMO3-215ENST00000537304 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
LMO3-215ENST00000537304 TERF1P54274 439 aa13.69□□□□□ -0.22
LMO3-215ENST00000537304 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
LMO3-215ENST00000537304 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
LMO3-215ENST00000537304 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
LMO3-215ENST00000537304 MAP7D2Q96T17 732 aa13.69□□□□□ -0.22
LMO3-215ENST00000537304 GBP4Q96PP9 640 aa13.68□□□□□ -0.22
LMO3-215ENST00000537304 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
LMO3-215ENST00000537304 BCAR3O75815 825 aa13.67□□□□□ -0.22
LMO3-215ENST00000537304 SEC24BO95487 1268 aa13.67□□□□□ -0.22
LMO3-215ENST00000537304 ANP32BQ92688 251 aaKnown RBP13.67□□□□□ -0.22
LMO3-215ENST00000537304 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms