RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SPATA31A6Q5VVP1 1343 aa7.8□□□□□ -1.16
CHD4-206ENST00000536999 MYOM3Q5VTT5 1437 aa7.8□□□□□ -1.16
CHD4-206ENST00000536999 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
CHD4-206ENST00000536999 ZBTB47Q9UFB7 747 aaPredicted RBP7.8□□□□□ -1.16
CHD4-206ENST00000536999 UGGT1Q9NYU2 1555 aa7.8□□□□□ -1.16
CHD4-206ENST00000536999 SPAG9O60271 1321 aaKnown RBP7.79□□□□□ -1.16
CHD4-206ENST00000536999 LRP6O75581 1613 aa7.79□□□□□ -1.16
CHD4-206ENST00000536999 PPM1GO15355 546 aaPredicted RBP7.79□□□□□ -1.16
CHD4-206ENST00000536999 PDE3BQ13370 1112 aa7.79□□□□□ -1.16
CHD4-206ENST00000536999 ROCK1Q13464 1354 aa7.79□□□□□ -1.16
CHD4-206ENST00000536999 NCOA2Q15596 1464 aa7.79□□□□□ -1.16
CHD4-206ENST00000536999 KDM5DQ9BY66 1539 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 ZBTB22O15209 634 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 MS4A1P11836 297 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 CACNB1Q02641 598 aaPredicted RBP7.78□□□□□ -1.16
CHD4-206ENST00000536999 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 IPO9Q96P70 1041 aaKnown RBP7.78□□□□□ -1.16
CHD4-206ENST00000536999 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
CHD4-206ENST00000536999 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 A2MP01023 1474 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 PHLPP1O60346 1717 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 EHBP1L1Q8N3D4 1523 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 NAIPQ13075 1403 aa7.78□□□□□ -1.16
CHD4-206ENST00000536999 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
CHD4-206ENST00000536999 NLRP1Q9C000 1473 aa7.77□□□□□ -1.17
CHD4-206ENST00000536999 TCERG1O14776 1098 aaKnown RBP7.77□□□□□ -1.17
CHD4-206ENST00000536999 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
CHD4-206ENST00000536999 RGS12O14924 1447 aa7.77□□□□□ -1.17
CHD4-206ENST00000536999 SAMD9LQ8IVG5 1584 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 INSRP06213 1382 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 TMEM94Q12767 1356 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 C1QBPQ07021 282 aaKnown RBP7.76□□□□□ -1.17
CHD4-206ENST00000536999 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 FOXD4L1Q9NU39 408 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
CHD4-206ENST00000536999 U3KPZ7 1027 aaPredicted RBP7.76□□□□□ -1.17
CHD4-206ENST00000536999 TROQ12816 1431 aaPredicted RBP7.76□□□□□ -1.17
CHD4-206ENST00000536999 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
CHD4-206ENST00000536999 PTPN23Q9H3S7 1636 aa7.75□□□□□ -1.17
CHD4-206ENST00000536999 HSPA5P11021 654 aaKnown RBP7.75□□□□□ -1.17
CHD4-206ENST00000536999 DEKP35659 375 aaKnown RBP7.75□□□□□ -1.17
CHD4-206ENST00000536999 RBM6P78332 1123 aaKnown RBP7.75□□□□□ -1.17
CHD4-206ENST00000536999 NUDCQ9Y266 331 aa7.75□□□□□ -1.17
CHD4-206ENST00000536999 AFF2P51816 1311 aa7.75□□□□□ -1.17
CHD4-206ENST00000536999 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
CHD4-206ENST00000536999 PZPP20742 1482 aa7.75□□□□□ -1.17
CHD4-206ENST00000536999 CCDC7Q96M83 1385 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 ATP7AQ04656 1500 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 YY1P25490 414 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 RALBP1Q15311 655 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 CDC42BPBQ9Y5S2 1711 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 WASHC2AQ641Q2 1341 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
CHD4-206ENST00000536999 XIRP1Q702N8 1843 aaKnown RBP7.73□□□□□ -1.17
CHD4-206ENST00000536999 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
CHD4-206ENST00000536999 MPHOSPH9Q99550 1183 aa7.73□□□□□ -1.17
CHD4-206ENST00000536999 QTRT2Q9H974 415 aaKnown RBP7.73□□□□□ -1.17
CHD4-206ENST00000536999 SLAIN2Q9P270 581 aa7.73□□□□□ -1.17
CHD4-206ENST00000536999 PREX2Q70Z35 1606 aa7.73□□□□□ -1.17
CHD4-206ENST00000536999 MSH6P52701 1360 aa7.72□□□□□ -1.17
CHD4-206ENST00000536999 NGLY1Q96IV0 654 aa7.72□□□□□ -1.17
CHD4-206ENST00000536999 DAXXQ9UER7 740 aaPredicted RBP7.72□□□□□ -1.17
CHD4-206ENST00000536999 SCAF11Q99590 1463 aaKnown RBP7.72□□□□□ -1.17
CHD4-206ENST00000536999 SYCP2Q9BX26 1530 aa7.72□□□□□ -1.17
CHD4-206ENST00000536999 COL16A1Q07092 1604 aaPredicted RBP7.71□□□□□ -1.17
CHD4-206ENST00000536999 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.18
CHD4-206ENST00000536999 SLC24A1O60721 1099 aa7.71□□□□□ -1.18
CHD4-206ENST00000536999 HNRNPMP52272 730 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD4-206ENST00000536999 RPRD2Q5VT52 1461 aaKnown RBP7.7□□□□□ -1.18
CHD4-206ENST00000536999 TXNDC2Q86VQ3 553 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 CCDC125Q86Z20 511 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 C8orf37Q96NL8 207 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 EID1Q9Y6B2 187 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 LRP5O75197 1615 aa7.7□□□□□ -1.18
CHD4-206ENST00000536999 KCNA6P17658 529 aa7.69□□□□□ -1.18
CHD4-206ENST00000536999 FAM9BQ8IZU0 186 aa7.69□□□□□ -1.18
CHD4-206ENST00000536999 BRD4O60885 1362 aaPredicted RBP7.69□□□□□ -1.18
CHD4-206ENST00000536999 INO80Q9ULG1 1556 aaPredicted RBP7.68□□□□□ -1.18
CHD4-206ENST00000536999 SENP3-EIF4A1A0A087X0R7 540 aa7.68□□□□□ -1.18
CHD4-206ENST00000536999 KIF3BO15066 747 aa7.68□□□□□ -1.18
CHD4-206ENST00000536999 LTKP29376 864 aa7.68□□□□□ -1.18
CHD4-206ENST00000536999 KIF15Q9NS87 1388 aa7.68□□□□□ -1.18
CHD4-206ENST00000536999 SHPRHQ149N8 1683 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 GCC2Q8IWJ2 1684 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
CHD4-206ENST00000536999 MYCNP04198 464 aaPredicted RBP7.67□□□□□ -1.18
CHD4-206ENST00000536999 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.67□□□□□ -1.18
CHD4-206ENST00000536999 L3MBTL2Q969R5 705 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 ANKRD30BQ9BXX2 1392 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 SPATA31E1Q6ZUB1 1445 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 PRDM15P57071 1507 aaPredicted RBP7.67□□□□□ -1.18
CHD4-206ENST00000536999 ADGBQ8N7X0 1667 aa7.67□□□□□ -1.18
CHD4-206ENST00000536999 B4GALNT3Q6L9W6 998 aa7.66□□□□□ -1.18
CHD4-206ENST00000536999 AAMPQ13685 434 aa7.65□□□□□ -1.18
CHD4-206ENST00000536999 NWD1Q149M9 1564 aa7.65□□□□□ -1.18
CHD4-206ENST00000536999 RSPH4AQ5TD94 716 aa7.65□□□□□ -1.18
CHD4-206ENST00000536999 DHX29Q7Z478 1369 aaKnown RBP7.65□□□□□ -1.18
CHD4-206ENST00000536999 C14orf37Q86TY3 774 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms