RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
PTCD2-211ENST00000536805 WDR43Q15061 677 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTCD2-211ENST00000536805 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
PTCD2-211ENST00000536805 ASXL1Q8IXJ9 1541 aa15.81■□□□□ 0.12
PTCD2-211ENST00000536805 SPHKAPQ2M3C7 1700 aa15.81■□□□□ 0.12
PTCD2-211ENST00000536805 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
PTCD2-211ENST00000536805 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
PTCD2-211ENST00000536805 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
PTCD2-211ENST00000536805 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
PTCD2-211ENST00000536805 MYOM1P52179 1685 aa15.79■□□□□ 0.12
PTCD2-211ENST00000536805 VIRMAQ69YN4 1812 aaKnown RBP15.78■□□□□ 0.12
PTCD2-211ENST00000536805 C8orf34Q49A92 452 aa15.78■□□□□ 0.12
PTCD2-211ENST00000536805 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
PTCD2-211ENST00000536805 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
PTCD2-211ENST00000536805 GSE1Q14687 1217 aa15.78■□□□□ 0.12
PTCD2-211ENST00000536805 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
PTCD2-211ENST00000536805 CEP152O94986 1710 aa15.77■□□□□ 0.12
PTCD2-211ENST00000536805 SCAF11Q99590 1463 aaKnown RBP15.77■□□□□ 0.12
PTCD2-211ENST00000536805 STAC3Q96MF2 364 aa15.77■□□□□ 0.12
PTCD2-211ENST00000536805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.12
PTCD2-211ENST00000536805 TRPM2O94759 1503 aa15.77■□□□□ 0.11
PTCD2-211ENST00000536805 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
PTCD2-211ENST00000536805 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
PTCD2-211ENST00000536805 SLFN5Q08AF3 891 aa15.76■□□□□ 0.11
PTCD2-211ENST00000536805 KIAA1210Q9ULL0 1709 aa15.75■□□□□ 0.11
PTCD2-211ENST00000536805 NKTRP30414 1462 aaKnown RBP15.75■□□□□ 0.11
PTCD2-211ENST00000536805 KDM5AP29375 1690 aaKnown RBP15.74■□□□□ 0.11
PTCD2-211ENST00000536805 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
PTCD2-211ENST00000536805 NINLQ9Y2I6 1382 aa15.72■□□□□ 0.11
PTCD2-211ENST00000536805 NEURL4Q96JN8 1562 aa15.72■□□□□ 0.11
PTCD2-211ENST00000536805 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
PTCD2-211ENST00000536805 ABCC1P33527 1531 aa15.71■□□□□ 0.11
PTCD2-211ENST00000536805 PTPRTO14522 1441 aa15.7■□□□□ 0.1
PTCD2-211ENST00000536805 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
PTCD2-211ENST00000536805 CLTCL1P53675 1640 aa15.69■□□□□ 0.1
PTCD2-211ENST00000536805 E9PSI1 815 aa15.68■□□□□ 0.1
PTCD2-211ENST00000536805 PLCH2O75038 1416 aa15.68■□□□□ 0.1
PTCD2-211ENST00000536805 SLC4A3P48751 1232 aa15.68■□□□□ 0.1
PTCD2-211ENST00000536805 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-211ENST00000536805 TET3O43151 1660 aa15.67■□□□□ 0.1
PTCD2-211ENST00000536805 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
PTCD2-211ENST00000536805 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
PTCD2-211ENST00000536805 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
PTCD2-211ENST00000536805 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
PTCD2-211ENST00000536805 RTEL1-TNFRSF6BF6WH68 1400 aa15.65■□□□□ 0.1
PTCD2-211ENST00000536805 RGS3P49796 1198 aa15.64■□□□□ 0.09
PTCD2-211ENST00000536805 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
PTCD2-211ENST00000536805 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
PTCD2-211ENST00000536805 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
PTCD2-211ENST00000536805 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
PTCD2-211ENST00000536805 ZMYM3Q14202 1370 aa15.63■□□□□ 0.09
PTCD2-211ENST00000536805 MYOM2P54296 1465 aa15.63■□□□□ 0.09
PTCD2-211ENST00000536805 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
PTCD2-211ENST00000536805 CHD1O14646 1710 aa15.63■□□□□ 0.09
PTCD2-211ENST00000536805 APAF1O14727 1248 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-211ENST00000536805 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 MYO3AQ8NEV4 1616 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 ERVK-7P63135 1459 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 CCDC146Q8IYE0 955 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 MAP3K4Q9Y6R4 1608 aa15.62■□□□□ 0.09
PTCD2-211ENST00000536805 AAMPQ13685 434 aa15.61■□□□□ 0.09
PTCD2-211ENST00000536805 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
PTCD2-211ENST00000536805 TRAPPC8Q9Y2L5 1435 aa15.61■□□□□ 0.09
PTCD2-211ENST00000536805 USP19O94966 1318 aa15.61■□□□□ 0.09
PTCD2-211ENST00000536805 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
PTCD2-211ENST00000536805 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-211ENST00000536805 BCAR3O75815 825 aa15.6■□□□□ 0.09
PTCD2-211ENST00000536805 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
PTCD2-211ENST00000536805 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
PTCD2-211ENST00000536805 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
PTCD2-211ENST00000536805 CENPJQ9HC77 1338 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-211ENST00000536805 PRKCSHP14314 528 aaPredicted RBP15.58■□□□□ 0.09
PTCD2-211ENST00000536805 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.09
PTCD2-211ENST00000536805 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
PTCD2-211ENST00000536805 IGHDP01880 384 aa15.58■□□□□ 0.08
PTCD2-211ENST00000536805 IFT172Q9UG01 1749 aa15.58■□□□□ 0.08
PTCD2-211ENST00000536805 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
PTCD2-211ENST00000536805 BECN1Q14457 450 aa15.57■□□□□ 0.08
PTCD2-211ENST00000536805 UHRF1BP1LA0JNW5 1464 aa15.57■□□□□ 0.08
PTCD2-211ENST00000536805 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
PTCD2-211ENST00000536805 IQSEC2Q5JU85 1478 aa15.56■□□□□ 0.08
PTCD2-211ENST00000536805 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
PTCD2-211ENST00000536805 KANK1Q14678 1352 aa15.55■□□□□ 0.08
PTCD2-211ENST00000536805 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
PTCD2-211ENST00000536805 KIF1BO60333 1816 aa15.54■□□□□ 0.08
PTCD2-211ENST00000536805 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
PTCD2-211ENST00000536805 USP32Q8NFA0 1604 aa15.54■□□□□ 0.08
PTCD2-211ENST00000536805 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
PTCD2-211ENST00000536805 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
PTCD2-211ENST00000536805 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
PTCD2-211ENST00000536805 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
PTCD2-211ENST00000536805 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
PTCD2-211ENST00000536805 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
PTCD2-211ENST00000536805 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
PTCD2-211ENST00000536805 ATP7AQ04656 1500 aa15.52■□□□□ 0.08
PTCD2-211ENST00000536805 ZC3H13Q5T200 1668 aaKnown RBP15.51■□□□□ 0.07
PTCD2-211ENST00000536805 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
PTCD2-211ENST00000536805 PANK1Q8TE04 598 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms