RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-202ENST00000535997 PPP2R1AP30153 589 aa21.25■□□□□ 0.99
CHMP1A-202ENST00000535997 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
CHMP1A-202ENST00000535997 SYNMO15061 1565 aa21.24■□□□□ 0.99
CHMP1A-202ENST00000535997 KIAA1210Q9ULL0 1709 aa21.23■□□□□ 0.99
CHMP1A-202ENST00000535997 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
CHMP1A-202ENST00000535997 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
CHMP1A-202ENST00000535997 MYT1LQ9UL68 1186 aa21.21■□□□□ 0.99
CHMP1A-202ENST00000535997 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
CHMP1A-202ENST00000535997 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
CHMP1A-202ENST00000535997 ASXL1Q8IXJ9 1541 aa21.19■□□□□ 0.98
CHMP1A-202ENST00000535997 ANP32AP39687 249 aaKnown RBP21.17■□□□□ 0.98
CHMP1A-202ENST00000535997 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
CHMP1A-202ENST00000535997 PIK3C2GO75747 1445 aa21.17■□□□□ 0.98
CHMP1A-202ENST00000535997 MYOM2P54296 1465 aa21.17■□□□□ 0.98
CHMP1A-202ENST00000535997 IPO9Q96P70 1041 aaKnown RBP21.15■□□□□ 0.98
CHMP1A-202ENST00000535997 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
CHMP1A-202ENST00000535997 CFAP70Q5T0N1 1121 aa21.15■□□□□ 0.98
CHMP1A-202ENST00000535997 MAP3K4Q9Y6R4 1608 aa21.14■□□□□ 0.98
CHMP1A-202ENST00000535997 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
CHMP1A-202ENST00000535997 PLIN1O60240 522 aa21.13■□□□□ 0.97
CHMP1A-202ENST00000535997 MS4A1P11836 297 aa21.13■□□□□ 0.97
CHMP1A-202ENST00000535997 ZNF521Q96K83 1311 aa21.12■□□□□ 0.97
CHMP1A-202ENST00000535997 KDM5AP29375 1690 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-202ENST00000535997 KIF1BO60333 1816 aa21.12■□□□□ 0.97
CHMP1A-202ENST00000535997 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
CHMP1A-202ENST00000535997 MYOM1P52179 1685 aa21.12■□□□□ 0.97
CHMP1A-202ENST00000535997 EFCAB6Q5THR3 1501 aa21.11■□□□□ 0.97
CHMP1A-202ENST00000535997 GOLGA2Q08379 1002 aa21.11■□□□□ 0.97
CHMP1A-202ENST00000535997 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
CHMP1A-202ENST00000535997 PLEKHH1Q9ULM0 1364 aa21.1■□□□□ 0.97
CHMP1A-202ENST00000535997 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
CHMP1A-202ENST00000535997 CRBNQ96SW2 442 aa21.08■□□□□ 0.97
CHMP1A-202ENST00000535997 ERVK-7P63135 1459 aa21.08■□□□□ 0.97
CHMP1A-202ENST00000535997 ZNF518AQ6AHZ1 1483 aa21.08■□□□□ 0.97
CHMP1A-202ENST00000535997 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
CHMP1A-202ENST00000535997 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.96
CHMP1A-202ENST00000535997 NRXN1Q9ULB1 1477 aa21.08■□□□□ 0.96
CHMP1A-202ENST00000535997 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
CHMP1A-202ENST00000535997 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
CHMP1A-202ENST00000535997 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-202ENST00000535997 PDE4AP27815 886 aa21.06■□□□□ 0.96
CHMP1A-202ENST00000535997 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-202ENST00000535997 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
CHMP1A-202ENST00000535997 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
CHMP1A-202ENST00000535997 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
CHMP1A-202ENST00000535997 NGEFQ8N5V2 710 aa21.04■□□□□ 0.96
CHMP1A-202ENST00000535997 PPRC1Q5VV67 1664 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-202ENST00000535997 TRMT2AQ8IZ69 625 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-202ENST00000535997 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
CHMP1A-202ENST00000535997 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
CHMP1A-202ENST00000535997 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-202ENST00000535997 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
CHMP1A-202ENST00000535997 SETBP1Q9Y6X0 1596 aa21.01■□□□□ 0.95
CHMP1A-202ENST00000535997 C20orf194Q5TEA3 1177 aa21.01■□□□□ 0.95
CHMP1A-202ENST00000535997 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
CHMP1A-202ENST00000535997 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-202ENST00000535997 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
CHMP1A-202ENST00000535997 NOS1P29475 1434 aa20.99■□□□□ 0.95
CHMP1A-202ENST00000535997 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
CHMP1A-202ENST00000535997 APAF1O14727 1248 aa20.98■□□□□ 0.95
CHMP1A-202ENST00000535997 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
CHMP1A-202ENST00000535997 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
CHMP1A-202ENST00000535997 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
CHMP1A-202ENST00000535997 CD109Q6YHK3 1445 aa20.97■□□□□ 0.95
CHMP1A-202ENST00000535997 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
CHMP1A-202ENST00000535997 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-202ENST00000535997 NPATQ14207 1427 aa20.96■□□□□ 0.95
CHMP1A-202ENST00000535997 POGZQ7Z3K3 1410 aa20.96■□□□□ 0.95
CHMP1A-202ENST00000535997 E9PSI1 815 aa20.95■□□□□ 0.95
CHMP1A-202ENST00000535997 CENPQQ7L2Z9 268 aaPredicted RBP20.95■□□□□ 0.95
CHMP1A-202ENST00000535997 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-202ENST00000535997 CFAP74Q9C0B2 1584 aa20.95■□□□□ 0.94
CHMP1A-202ENST00000535997 GGT6Q6P531 493 aa20.94■□□□□ 0.94
CHMP1A-202ENST00000535997 NKTRP30414 1462 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-202ENST00000535997 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
CHMP1A-202ENST00000535997 SPINK5Q9NQ38 1064 aaPredicted RBP20.92■□□□□ 0.94
CHMP1A-202ENST00000535997 PPLO60437 1756 aa20.91■□□□□ 0.94
CHMP1A-202ENST00000535997 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
CHMP1A-202ENST00000535997 FRMPD1Q5SYB0 1578 aa20.91■□□□□ 0.94
CHMP1A-202ENST00000535997 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
CHMP1A-202ENST00000535997 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-202ENST00000535997 PUS7Q96PZ0 661 aaKnown RBP20.89■□□□□ 0.94
CHMP1A-202ENST00000535997 ADGRB1O14514 1584 aa20.89■□□□□ 0.94
CHMP1A-202ENST00000535997 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
CHMP1A-202ENST00000535997 HECW2Q9P2P5 1572 aa20.88■□□□□ 0.93
CHMP1A-202ENST00000535997 NBR1Q14596 966 aa20.88■□□□□ 0.93
CHMP1A-202ENST00000535997 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
CHMP1A-202ENST00000535997 NSD3Q9BZ95 1437 aa20.87■□□□□ 0.93
CHMP1A-202ENST00000535997 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
CHMP1A-202ENST00000535997 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
CHMP1A-202ENST00000535997 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
CHMP1A-202ENST00000535997 ABCC3O15438 1527 aa20.86■□□□□ 0.93
CHMP1A-202ENST00000535997 ZC3H13Q5T200 1668 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-202ENST00000535997 QRICH2Q9H0J4 1663 aa20.84■□□□□ 0.93
CHMP1A-202ENST00000535997 SKAP1Q86WV1 359 aa20.84■□□□□ 0.93
CHMP1A-202ENST00000535997 BCAR3O75815 825 aa20.83■□□□□ 0.93
CHMP1A-202ENST00000535997 DEKP35659 375 aaKnown RBP20.83■□□□□ 0.93
CHMP1A-202ENST00000535997 CGNL1Q0VF96 1302 aa20.83■□□□□ 0.92
CHMP1A-202ENST00000535997 PDE3AQ14432 1141 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms