RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
COL21A1-212ENST00000535941 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
COL21A1-212ENST00000535941 FAM69CQ0P6D2 419 aa11.39□□□□□ -0.59
COL21A1-212ENST00000535941 HSPA5P11021 654 aaKnown RBP11.39□□□□□ -0.59
COL21A1-212ENST00000535941 USP47Q96K76 1375 aa11.38□□□□□ -0.59
COL21A1-212ENST00000535941 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
COL21A1-212ENST00000535941 KIF3BO15066 747 aa11.37□□□□□ -0.59
COL21A1-212ENST00000535941 USP32Q8NFA0 1604 aa11.36□□□□□ -0.59
COL21A1-212ENST00000535941 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
COL21A1-212ENST00000535941 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
COL21A1-212ENST00000535941 MIER1Q8N108 512 aa11.36□□□□□ -0.59
COL21A1-212ENST00000535941 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
COL21A1-212ENST00000535941 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
COL21A1-212ENST00000535941 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL21A1-212ENST00000535941 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
COL21A1-212ENST00000535941 SBNO2Q9Y2G9 1366 aa11.32□□□□□ -0.6
COL21A1-212ENST00000535941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL21A1-212ENST00000535941 A2ML1A8K2U0 1454 aa11.3□□□□□ -0.6
COL21A1-212ENST00000535941 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
COL21A1-212ENST00000535941 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
COL21A1-212ENST00000535941 TESK2Q96S53 571 aa11.3□□□□□ -0.6
COL21A1-212ENST00000535941 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
COL21A1-212ENST00000535941 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
COL21A1-212ENST00000535941 ALKQ9UM73 1620 aa11.28□□□□□ -0.6
COL21A1-212ENST00000535941 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
COL21A1-212ENST00000535941 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
COL21A1-212ENST00000535941 PTPRMP28827 1452 aa11.28□□□□□ -0.6
COL21A1-212ENST00000535941 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
COL21A1-212ENST00000535941 SLIT1O75093 1534 aa11.26□□□□□ -0.61
COL21A1-212ENST00000535941 CPS1P31327 1500 aa11.26□□□□□ -0.61
COL21A1-212ENST00000535941 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
COL21A1-212ENST00000535941 DISP3Q9P2K9 1392 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 TULP4Q9NRJ4 1543 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
COL21A1-212ENST00000535941 WASHC2CQ9Y4E1 1318 aa11.23□□□□□ -0.61
COL21A1-212ENST00000535941 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-212ENST00000535941 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
COL21A1-212ENST00000535941 MED14O60244 1454 aa11.23□□□□□ -0.61
COL21A1-212ENST00000535941 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
COL21A1-212ENST00000535941 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
COL21A1-212ENST00000535941 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
COL21A1-212ENST00000535941 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
COL21A1-212ENST00000535941 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
COL21A1-212ENST00000535941 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
COL21A1-212ENST00000535941 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.62
COL21A1-212ENST00000535941 C14orf93Q9H972 538 aaKnown RBP11.21□□□□□ -0.62
COL21A1-212ENST00000535941 AKAP12Q02952 1782 aa11.21□□□□□ -0.62
COL21A1-212ENST00000535941 TECPR2O15040 1411 aa11.2□□□□□ -0.62
COL21A1-212ENST00000535941 ST20-MTHFSA0A0A6YYL1 179 aa11.19□□□□□ -0.62
COL21A1-212ENST00000535941 ZMYM3Q14202 1370 aa11.19□□□□□ -0.62
COL21A1-212ENST00000535941 PARD3Q8TEW0 1356 aa11.19□□□□□ -0.62
COL21A1-212ENST00000535941 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
COL21A1-212ENST00000535941 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
COL21A1-212ENST00000535941 GGT6Q6P531 493 aa11.18□□□□□ -0.62
COL21A1-212ENST00000535941 EIF3AQ14152 1382 aaKnown RBP11.18□□□□□ -0.62
COL21A1-212ENST00000535941 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
COL21A1-212ENST00000535941 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
COL21A1-212ENST00000535941 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
COL21A1-212ENST00000535941 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
COL21A1-212ENST00000535941 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
COL21A1-212ENST00000535941 IDI1Q13907 227 aa11.17□□□□□ -0.62
COL21A1-212ENST00000535941 INSRP06213 1382 aa11.17□□□□□ -0.62
COL21A1-212ENST00000535941 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
COL21A1-212ENST00000535941 RGL3Q3MIN7 710 aa11.16□□□□□ -0.62
COL21A1-212ENST00000535941 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
COL21A1-212ENST00000535941 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
COL21A1-212ENST00000535941 CHD2O14647 1828 aaKnown RBP11.15□□□□□ -0.63
COL21A1-212ENST00000535941 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
COL21A1-212ENST00000535941 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-212ENST00000535941 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
COL21A1-212ENST00000535941 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
COL21A1-212ENST00000535941 LRPPRCP42704 1394 aaKnown RBP11.13□□□□□ -0.63
COL21A1-212ENST00000535941 ADAMTS13Q76LX8 1427 aa11.12□□□□□ -0.63
COL21A1-212ENST00000535941 YTHDC2Q9H6S0 1430 aaKnown RBP11.12□□□□□ -0.63
COL21A1-212ENST00000535941 TNRQ92752 1358 aa11.12□□□□□ -0.63
COL21A1-212ENST00000535941 ITSN1Q15811 1721 aa11.11□□□□□ -0.63
COL21A1-212ENST00000535941 NALCNQ8IZF0 1738 aa11.11□□□□□ -0.63
COL21A1-212ENST00000535941 CFAP70Q5T0N1 1121 aa11.11□□□□□ -0.63
COL21A1-212ENST00000535941 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
COL21A1-212ENST00000535941 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
COL21A1-212ENST00000535941 MARF1Q9Y4F3 1742 aaKnown RBP11.1□□□□□ -0.63
COL21A1-212ENST00000535941 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
COL21A1-212ENST00000535941 FAM135BQ49AJ0 1406 aa11.1□□□□□ -0.63
COL21A1-212ENST00000535941 ANP32CO43423 234 aa11.1□□□□□ -0.63
COL21A1-212ENST00000535941 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
COL21A1-212ENST00000535941 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
COL21A1-212ENST00000535941 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
COL21A1-212ENST00000535941 SLC24A1O60721 1099 aa11.08□□□□□ -0.64
COL21A1-212ENST00000535941 ZNF326Q5BKZ1 582 aaKnown RBP11.08□□□□□ -0.64
COL21A1-212ENST00000535941 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
COL21A1-212ENST00000535941 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
COL21A1-212ENST00000535941 BRD4O60885 1362 aaPredicted RBP11.07□□□□□ -0.64
COL21A1-212ENST00000535941 FMN2Q9NZ56 1722 aa11.07□□□□□ -0.64
COL21A1-212ENST00000535941 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
COL21A1-212ENST00000535941 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
COL21A1-212ENST00000535941 TMF1P82094 1093 aa11.07□□□□□ -0.64
COL21A1-212ENST00000535941 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms